Wall clock time and date at job start Tue Mar 9 2021 14:03:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86300 * 109.47379 * 2 1 4 4 C 1.50703 * 109.46711 * 119.99792 * 2 1 3 5 5 C 1.38250 * 119.93693 * 64.99669 * 4 2 1 6 6 C 1.38237 * 120.04077 * 179.97438 * 5 4 2 7 7 Br 1.89098 * 120.03498 * 180.02562 * 6 5 4 8 8 C 1.38790 * 119.93072 * 0.02562 * 6 5 4 9 9 O 1.35916 * 120.06134 * 179.97438 * 8 6 5 10 10 C 1.42908 * 117.00118 * 180.02562 * 9 8 6 11 11 C 1.50697 * 109.46928 * 179.97438 * 10 9 8 12 12 O 1.21282 * 120.00293 * 0.02562 * 11 10 9 13 13 N 1.34778 * 120.00086 * 179.97438 * 11 10 9 14 14 C 1.46497 * 120.00247 * 179.97438 * 13 11 10 15 15 C 1.52997 * 109.47096 * 180.02562 * 14 13 11 16 16 H 1.09007 * 112.85116 * 43.80582 * 15 14 13 17 17 C 1.53782 * 113.61449 * 175.00132 * 15 14 13 18 18 C 1.53780 * 87.08218 * 139.98553 * 17 15 14 19 19 H 1.08999 * 113.61600 * 219.94140 * 18 17 15 20 20 N 1.46501 * 113.61717 * 89.11411 * 18 17 15 21 21 C 1.34943 * 126.03927 * 275.00306 * 20 18 17 22 22 C 1.35310 * 107.74672 * 179.97438 * 21 20 18 23 23 C 1.39873 * 107.92370 * 359.97438 * 22 21 20 24 24 N 1.30841 * 108.19816 * 359.74279 * 23 22 21 25 25 C 1.53780 * 113.61950 * 272.50207 * 15 14 13 26 26 C 1.38725 * 119.88073 * 0.02562 * 8 6 5 27 27 C 1.38140 * 119.95169 * 359.97438 * 26 8 6 28 28 H 0.96699 * 114.00185 * 300.00943 * 1 2 3 29 29 H 1.08997 * 109.47403 * 239.99558 * 2 1 3 30 30 H 1.48495 * 109.99917 * 178.67519 * 3 2 1 31 31 H 1.48497 * 110.00051 * 299.99754 * 3 2 1 32 32 H 1.07994 * 119.97832 * 0.02562 * 5 4 2 33 33 H 1.09007 * 109.46399 * 299.99541 * 10 9 8 34 34 H 1.08993 * 109.46924 * 59.99475 * 10 9 8 35 35 H 0.97004 * 119.99693 * 0.02562 * 13 11 10 36 36 H 1.08999 * 109.47201 * 300.00485 * 14 13 11 37 37 H 1.09001 * 109.46711 * 60.00729 * 14 13 11 38 38 H 1.09002 * 113.61217 * 254.53045 * 17 15 14 39 39 H 1.08993 * 113.61640 * 25.43469 * 17 15 14 40 40 H 1.08006 * 126.12663 * 359.97438 * 21 20 18 41 41 H 1.08006 * 126.04295 * 180.02562 * 22 21 20 42 42 H 1.07997 * 125.90258 * 179.97438 * 23 22 21 43 43 H 1.09004 * 113.60887 * 334.56424 * 25 15 14 44 44 H 1.08995 * 113.62074 * 105.46789 * 25 15 14 45 45 H 1.08006 * 120.01988 * 179.72865 * 26 8 6 46 46 H 1.08001 * 119.95908 * 179.97438 * 27 26 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6838 -2.0603 1.3972 6 6 2.1440 -2.7142 2.5249 7 35 1.8060 -4.5608 2.7523 8 6 2.8543 -2.0140 3.4899 9 8 3.3075 -2.6541 4.6000 10 6 4.0306 -1.8702 5.5512 11 6 4.4496 -2.7428 6.7063 12 8 4.1582 -3.9200 6.7139 13 7 5.1491 -2.2151 7.7304 14 6 5.5560 -3.0631 8.8535 15 6 6.3302 -2.2239 9.8719 16 1 5.8663 -1.2562 10.0632 17 6 6.6994 -2.9936 11.1510 18 6 8.0575 -2.2744 11.0978 19 1 8.9003 -2.9126 11.3631 20 7 8.0704 -0.9915 11.8052 21 6 7.6821 0.1978 11.2996 22 6 7.8467 1.1304 12.2661 23 6 8.3524 0.4889 13.4015 24 7 8.4814 -0.7841 13.1282 25 6 7.8380 -2.1395 9.5816 26 6 3.1000 -0.6593 3.3201 27 6 2.6379 -0.0107 2.1913 28 1 -0.3933 0.4418 0.7650 29 1 1.7924 -0.5139 -0.8899 30 1 3.5347 1.7702 0.0323 31 1 1.5617 2.4679 -1.2085 32 1 1.1314 -2.6045 0.6456 33 1 4.9153 -1.4469 5.0755 34 1 3.3940 -1.0647 5.9170 35 1 5.3825 -1.2736 7.7241 36 1 4.6709 -3.4855 9.3291 37 1 6.1919 -3.8694 8.4881 38 1 6.0940 -2.7201 12.0152 39 1 6.7703 -4.0717 11.0068 40 1 7.3071 0.3739 10.3021 41 1 7.6258 2.1838 12.1770 42 1 8.5913 0.9619 14.3425 43 1 8.2202 -2.9842 9.0083 44 1 8.1520 -1.1766 9.1789 45 1 3.6487 -0.1112 4.0718 46 1 2.8287 1.0440 2.0592 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16946172_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:03:32 Heat of formation + Delta-G solvation = 47.101008 kcal Electronic energy + Delta-G solvation = -30389.930202 eV Core-core repulsion = 25910.212167 eV Total energy + Delta-G solvation = -4479.718035 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.067 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -42.39657 -41.65112 -40.72532 -39.75893 -39.01195 -37.20576 -35.73218 -33.60623 -32.52364 -31.91762 -31.03018 -30.66806 -30.08709 -28.13045 -26.87593 -26.29443 -24.64109 -23.80833 -22.39684 -22.31376 -21.78428 -21.52225 -20.27882 -19.55680 -18.61762 -18.13955 -17.83224 -17.52892 -17.16121 -17.04331 -16.45852 -16.39295 -16.00914 -15.91118 -15.65511 -15.52740 -15.45816 -15.00682 -14.73292 -14.66691 -14.42842 -14.39612 -13.93779 -13.80358 -13.76130 -13.66630 -13.52709 -13.25229 -12.94467 -12.34799 -12.16938 -12.11997 -12.10062 -11.90391 -11.83709 -11.75812 -11.59288 -11.49844 -11.22905 -10.96519 -10.41657 -10.35680 -10.17954 -9.96639 -9.49358 -9.31187 -4.97202 -0.04360 0.12864 0.64912 0.97589 1.34707 1.44114 1.48978 1.55060 1.67885 1.95480 2.03381 2.40800 2.52317 3.18983 3.31770 3.49354 3.51153 3.59471 3.67315 3.70594 3.77709 3.86889 3.94521 4.05844 4.06492 4.11618 4.13373 4.19184 4.33972 4.38404 4.47941 4.51644 4.65276 4.66448 4.71165 4.73411 4.77924 4.85818 4.89023 4.92230 4.99275 5.01281 5.14782 5.20972 5.24850 5.36720 5.49725 5.75637 6.08293 6.20620 6.47763 6.78770 6.80276 7.16861 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.077 4.077 3 Si 0.789 3.211 4 C -0.154 4.154 5 C -0.037 4.037 6 C -0.146 4.146 7 Br -0.057 7.057 8 C 0.149 3.851 9 O -0.307 6.307 10 C 0.031 3.969 11 C 0.510 3.490 12 O -0.572 6.572 13 N -0.706 5.706 14 C 0.134 3.866 15 C -0.108 4.108 16 H 0.113 0.887 17 C -0.138 4.138 18 C 0.119 3.881 19 H 0.104 0.896 20 N -0.360 5.360 21 C 0.057 3.943 22 C -0.289 4.289 23 C 0.030 3.970 24 N -0.346 5.346 25 C -0.122 4.122 26 C -0.188 4.188 27 C -0.053 4.053 28 H 0.396 0.604 29 H 0.103 0.897 30 H -0.276 1.276 31 H -0.306 1.306 32 H 0.133 0.867 33 H 0.133 0.867 34 H 0.134 0.866 35 H 0.422 0.578 36 H 0.057 0.943 37 H 0.068 0.932 38 H 0.062 0.938 39 H 0.113 0.887 40 H 0.209 0.791 41 H 0.166 0.834 42 H 0.196 0.804 43 H 0.119 0.881 44 H 0.098 0.902 45 H 0.183 0.817 46 H 0.168 0.832 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.164 10.629 0.942 10.888 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.186 4.186 3 Si 0.695 3.305 4 C -0.155 4.155 5 C -0.057 4.057 6 C -0.226 4.226 7 Br 0.029 6.971 8 C 0.101 3.899 9 O -0.219 6.219 10 C -0.046 4.046 11 C 0.296 3.704 12 O -0.450 6.450 13 N -0.361 5.361 14 C 0.011 3.989 15 C -0.127 4.127 16 H 0.131 0.869 17 C -0.177 4.177 18 C 0.016 3.984 19 H 0.122 0.878 20 N -0.143 5.143 21 C -0.089 4.089 22 C -0.319 4.319 23 C -0.155 4.155 24 N -0.167 5.167 25 C -0.160 4.160 26 C -0.207 4.207 27 C -0.070 4.070 28 H 0.246 0.754 29 H 0.120 0.880 30 H -0.202 1.202 31 H -0.234 1.234 32 H 0.151 0.849 33 H 0.150 0.850 34 H 0.152 0.848 35 H 0.261 0.739 36 H 0.075 0.925 37 H 0.086 0.914 38 H 0.081 0.919 39 H 0.131 0.869 40 H 0.226 0.774 41 H 0.183 0.817 42 H 0.213 0.787 43 H 0.137 0.863 44 H 0.117 0.883 45 H 0.200 0.800 46 H 0.185 0.815 Dipole moment (debyes) X Y Z Total from point charges 2.740 7.865 0.536 8.346 hybrid contribution -0.081 0.422 -0.335 0.545 sum 2.659 8.287 0.201 8.705 Atomic orbital electron populations 1.86492 1.17417 1.82238 1.50527 1.25295 0.85253 1.11444 0.96592 0.93807 0.77807 0.73919 0.85006 1.20371 1.02703 0.93684 0.98749 1.20872 0.95862 0.94546 0.94420 1.21278 1.09894 0.91838 0.99546 1.96761 1.94988 1.07674 1.97713 1.18806 0.93210 0.91810 0.86062 1.86253 1.68704 1.38006 1.28941 1.22892 0.99752 0.93727 0.88232 1.20532 0.77963 0.87954 0.83962 1.90804 1.55791 1.18931 1.79516 1.45605 1.55899 1.14583 1.20015 1.21299 0.98666 0.93242 0.85715 1.22816 0.95359 1.00233 0.94260 0.86866 1.23388 0.95127 1.01339 0.97806 1.22265 1.00089 0.82096 0.93903 0.87846 1.48582 1.49313 1.07404 1.08977 1.23083 0.99549 0.84743 1.01505 1.21901 1.13990 1.02072 0.93897 1.24372 0.98944 0.90931 1.01223 1.77353 1.24170 1.19602 0.95599 1.23497 0.94875 1.05818 0.91813 1.21594 1.05871 0.91452 1.01739 1.21260 0.93494 1.00659 0.91599 0.75406 0.87959 1.20205 1.23436 0.84881 0.84962 0.84830 0.73948 0.92485 0.91380 0.91868 0.86918 0.77422 0.81688 0.78709 0.86315 0.88312 0.79956 0.81476 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.72 12.83 -148.98 -1.91 -1.19 16 2 C -0.08 0.23 2.80 71.24 0.20 0.43 16 3 Si 0.79 -5.07 29.80 68.60 2.04 -3.03 16 4 C -0.15 0.40 5.35 -19.85 -0.11 0.30 16 5 C -0.04 -0.09 9.42 22.27 0.21 0.12 16 6 C -0.15 -0.70 6.24 22.40 0.14 -0.56 16 7 Br -0.06 -0.52 33.16 -20.37 -0.68 -1.19 16 8 C 0.15 0.11 6.68 22.52 0.15 0.26 16 9 O -0.31 -0.88 9.01 -73.57 -0.66 -1.55 16 10 C 0.03 -0.24 5.22 71.23 0.37 0.13 16 11 C 0.51 -0.66 7.91 87.66 0.69 0.03 16 12 O -0.57 -6.73 16.50 16.00 0.26 -6.46 16 13 N -0.71 6.63 5.56 -463.07 -2.57 4.06 16 14 C 0.13 -0.93 5.51 86.38 0.48 -0.45 16 15 C -0.11 1.17 3.33 -10.27 -0.03 1.13 16 16 H 0.11 -1.45 6.98 -2.38 -0.02 -1.46 16 17 C -0.14 0.83 7.44 31.12 0.23 1.06 16 18 C 0.12 -0.55 5.18 45.52 0.24 -0.31 16 19 H 0.10 -0.32 8.14 -2.39 -0.02 -0.34 16 20 N -0.36 -0.12 3.79 -324.99 -1.23 -1.36 16 21 C 0.06 -0.24 9.62 83.54 0.80 0.56 16 22 C -0.29 0.42 10.80 21.99 0.24 0.66 16 23 C 0.03 0.09 12.03 85.24 1.03 1.11 16 24 N -0.35 -2.45 12.58 -57.02 -0.72 -3.17 16 25 C -0.12 1.41 6.88 31.12 0.21 1.62 16 26 C -0.19 1.41 9.04 22.36 0.20 1.61 16 27 C -0.05 0.40 8.66 22.25 0.19 0.59 16 28 H 0.40 -3.87 8.70 -74.06 -0.64 -4.52 16 29 H 0.10 -0.10 7.96 -2.39 -0.02 -0.12 16 30 H -0.28 0.84 7.11 99.48 0.71 1.55 16 31 H -0.31 -0.78 7.11 99.48 0.71 -0.07 16 32 H 0.13 0.42 8.06 -2.91 -0.02 0.40 16 33 H 0.13 -1.99 7.67 -2.38 -0.02 -2.01 16 34 H 0.13 -2.03 7.66 -2.39 -0.02 -2.05 16 35 H 0.42 -7.52 8.47 -92.71 -0.79 -8.31 16 36 H 0.06 -0.14 8.14 -2.39 -0.02 -0.16 16 37 H 0.07 -0.31 7.84 -2.39 -0.02 -0.33 16 38 H 0.06 -0.11 8.14 -2.39 -0.02 -0.13 16 39 H 0.11 -0.84 8.10 -2.39 -0.02 -0.86 16 40 H 0.21 -2.79 6.67 -2.91 -0.02 -2.81 16 41 H 0.17 -0.98 8.06 -2.91 -0.02 -1.00 16 42 H 0.20 -0.37 8.06 -2.91 -0.02 -0.40 16 43 H 0.12 -1.49 7.90 -2.38 -0.02 -1.50 16 44 H 0.10 -1.40 6.97 -2.39 -0.02 -1.41 16 45 H 0.18 -3.00 6.30 -2.91 -0.02 -3.02 16 46 H 0.17 -2.36 4.90 -2.91 -0.01 -2.38 16 Total: 0.00 -35.96 404.25 -0.56 -36.53 By element: Atomic # 1 Polarization: -30.60 SS G_CDS: -0.34 Total: -30.94 kcal Atomic # 6 Polarization: 3.05 SS G_CDS: 5.24 Total: 8.30 kcal Atomic # 7 Polarization: 4.06 SS G_CDS: -4.52 Total: -0.46 kcal Atomic # 8 Polarization: -6.89 SS G_CDS: -2.31 Total: -9.20 kcal Atomic # 14 Polarization: -5.07 SS G_CDS: 2.04 Total: -3.03 kcal Atomic # 35 Polarization: -0.52 SS G_CDS: -0.68 Total: -1.19 kcal Total: -35.96 -0.56 -36.53 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946172_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 83.627 kcal (2) G-P(sol) polarization free energy of solvation -35.962 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 47.665 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.564 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.526 kcal (6) G-S(sol) free energy of system = (1) + (5) 47.101 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds