Wall clock time and date at job start Tue Mar 9 2021 14:05:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35656 * 117.00149 * 2 1 4 4 C 1.38395 * 120.12126 * 359.97438 * 3 2 1 5 5 C 1.38721 * 120.03649 * 180.02562 * 4 3 2 6 6 O 1.35722 * 119.86923 * 180.02562 * 5 4 3 7 7 C 1.42905 * 116.99402 * 359.97438 * 6 5 4 8 8 C 1.39141 * 120.27039 * 359.97438 * 5 4 3 9 9 C 1.50707 * 119.88012 * 180.02562 * 8 5 4 10 10 O 1.42903 * 109.46442 * 75.00424 * 9 8 5 11 11 Si 1.86293 * 109.47256 * 194.99991 * 9 8 5 12 12 C 1.37580 * 120.24249 * 0.29832 * 8 5 4 13 13 C 1.39825 * 119.96317 * 359.45804 * 12 8 5 14 14 C 1.47290 * 120.13536 * 180.29078 * 13 12 8 15 15 O 1.21623 * 119.99702 * 180.22308 * 14 13 12 16 16 N 1.34774 * 120.00255 * 0.22586 * 14 13 12 17 17 C 1.46510 * 119.99844 * 179.97438 * 16 14 13 18 18 H 1.08992 * 112.84918 * 334.66439 * 17 16 14 19 19 C 1.53780 * 113.61301 * 105.86666 * 17 16 14 20 20 C 1.54042 * 86.98867 * 89.15901 * 19 17 16 21 21 H 1.09003 * 113.61482 * 270.88618 * 20 19 17 22 22 C 1.50697 * 113.70041 * 139.98839 * 20 19 17 23 23 N 1.30501 * 125.65409 * 167.48898 * 22 20 19 24 24 C 1.34127 * 109.25492 * 180.02562 * 23 22 20 25 25 C 1.34675 * 108.02389 * 359.97438 * 24 23 22 26 26 N 1.35046 * 125.64644 * 347.18570 * 22 20 19 27 27 C 1.53779 * 87.08027 * 25.42730 * 20 19 17 28 28 H 1.08997 * 109.47525 * 60.00100 * 1 2 3 29 29 H 1.09003 * 109.47369 * 180.02562 * 1 2 3 30 30 H 1.08997 * 109.47364 * 300.00162 * 1 2 3 31 31 H 1.08011 * 119.98243 * 0.04263 * 4 3 2 32 32 H 1.09002 * 109.47184 * 60.00136 * 7 6 5 33 33 H 1.09002 * 109.46532 * 180.02562 * 7 6 5 34 34 H 1.09002 * 109.46895 * 299.99848 * 7 6 5 35 35 H 1.08999 * 109.47345 * 315.00494 * 9 8 5 36 36 H 0.96700 * 114.00311 * 60.00230 * 10 9 8 37 37 H 1.48506 * 109.99973 * 180.02562 * 11 9 8 38 38 H 1.48493 * 110.00375 * 301.32185 * 11 9 8 39 39 H 1.08007 * 120.02342 * 179.69992 * 12 8 5 40 40 H 0.96995 * 119.99865 * 359.97438 * 16 14 13 41 41 H 1.09004 * 113.60835 * 203.66487 * 19 17 16 42 42 H 1.09001 * 113.61436 * 334.56034 * 19 17 16 43 43 H 1.07999 * 125.98851 * 180.02562 * 24 23 22 44 44 H 1.07997 * 126.59194 * 180.02562 * 25 24 23 45 45 H 0.97008 * 126.39697 * 0.02562 * 26 22 20 46 46 H 1.09000 * 113.62214 * 220.02087 * 27 20 19 47 47 H 1.09008 * 113.61200 * 89.11821 * 27 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 1.2936 2.3710 -0.0005 5 6 1.9252 3.6060 -0.0011 6 8 1.1851 4.7437 -0.0011 7 6 -0.2359 4.5931 -0.0011 8 6 3.3145 3.6833 -0.0005 9 6 3.9916 5.0297 -0.0005 10 8 3.8935 5.6121 1.3008 11 14 5.7864 4.8223 -0.4544 12 6 4.0724 2.5351 -0.0057 13 6 3.4461 1.2849 0.0000 14 6 4.2538 0.0533 0.0010 15 8 3.7065 -1.0328 0.0019 16 7 5.5994 0.1298 0.0011 17 6 6.4028 -1.0955 0.0026 18 1 5.8756 -1.9466 0.4334 19 6 7.0628 -1.4010 -1.3523 20 6 8.2560 -0.5545 -0.8701 21 1 8.1650 0.5049 -1.1098 22 6 9.5974 -1.1271 -1.2492 23 7 10.7409 -0.5034 -1.1689 24 6 11.7196 -1.3180 -1.5902 25 6 11.1616 -2.4913 -1.9446 26 7 9.8160 -2.3727 -1.7230 27 6 7.8213 -0.9011 0.5637 28 1 -0.3634 0.5138 -0.8899 29 1 -0.3634 -1.0277 0.0005 30 1 -0.3634 0.5138 0.8899 31 1 0.2149 2.3164 -0.0003 32 1 -0.5431 4.0438 0.8889 33 1 -0.7055 5.5768 -0.0015 34 1 -0.5431 4.0438 -0.8911 35 1 3.5058 5.6807 -0.7275 36 1 4.3055 5.0855 1.9994 37 1 6.4655 6.1430 -0.4573 38 1 6.4524 3.9114 0.5109 39 1 5.1505 2.5992 -0.0101 40 1 6.0359 0.9959 0.0001 41 1 7.3035 -2.4548 -1.4929 42 1 6.5346 -0.9694 -2.2025 43 1 12.7711 -1.0758 -1.6363 44 1 11.6771 -3.3603 -2.3258 45 1 9.1445 -3.0549 -1.8800 46 1 7.9052 -0.0662 1.2594 47 1 8.2691 -1.8185 0.9460 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16970406_12297780.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:05:39 Heat of formation + Delta-G solvation = -9.674481 kcal Electronic energy + Delta-G solvation = -32436.207564 eV Core-core repulsion = 27975.163370 eV Total energy + Delta-G solvation = -4461.044194 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.156 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -43.05871 -42.09011 -40.93254 -40.06912 -39.01578 -38.44684 -37.01265 -34.43241 -33.36774 -32.24493 -31.77791 -30.42237 -29.09949 -28.28491 -26.91451 -26.38561 -26.07900 -24.56696 -23.01952 -22.42991 -21.70204 -21.61539 -20.50922 -20.01563 -19.16433 -18.70716 -18.10344 -17.94497 -17.23487 -17.13322 -16.64622 -16.54509 -16.36955 -16.18728 -15.85750 -15.79881 -15.74363 -15.55213 -15.36791 -15.23337 -14.76443 -14.52136 -14.39251 -14.25659 -13.99186 -13.77111 -13.59758 -13.38230 -13.21666 -12.77369 -12.64146 -12.58981 -12.52388 -12.20917 -11.92580 -11.79712 -11.69286 -11.55251 -10.92719 -10.91891 -10.75678 -10.54861 -10.08950 -9.92442 -9.29944 -9.15570 -5.00892 -0.22093 0.10383 1.11721 1.25098 1.48410 1.80808 1.93907 2.02792 2.04576 2.12603 2.18145 2.23117 2.66122 3.22531 3.33660 3.40840 3.42618 3.52853 3.59533 3.71128 3.71322 3.78798 3.97168 3.99313 4.04520 4.09539 4.11436 4.13246 4.15665 4.22138 4.42119 4.46263 4.49779 4.50581 4.52468 4.56188 4.64808 4.75395 4.76912 4.81040 4.88013 4.93825 5.00666 5.02777 5.18995 5.28863 5.52788 5.84429 5.99272 6.26946 6.41170 6.46347 6.50841 7.19630 7.32161 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.274 6.274 3 C 0.235 3.765 4 C -0.315 4.315 5 C 0.224 3.776 6 O -0.295 6.295 7 C 0.021 3.979 8 C -0.194 4.194 9 C -0.057 4.057 10 O -0.524 6.524 11 Si 0.679 3.321 12 C -0.012 4.012 13 C -0.210 4.210 14 C 0.570 3.430 15 O -0.515 6.515 16 N -0.717 5.717 17 C 0.128 3.872 18 H 0.110 0.890 19 C -0.149 4.149 20 C -0.027 4.027 21 H 0.120 0.880 22 C 0.219 3.781 23 N -0.487 5.487 24 C -0.027 4.027 25 C -0.056 4.056 26 N -0.565 5.565 27 C -0.133 4.133 28 H 0.058 0.942 29 H 0.107 0.893 30 H 0.057 0.943 31 H 0.145 0.855 32 H 0.059 0.941 33 H 0.107 0.893 34 H 0.059 0.941 35 H 0.119 0.881 36 H 0.373 0.627 37 H -0.252 1.252 38 H -0.255 1.255 39 H 0.140 0.860 40 H 0.398 0.602 41 H 0.086 0.914 42 H 0.086 0.914 43 H 0.171 0.829 44 H 0.178 0.822 45 H 0.418 0.582 46 H 0.084 0.916 47 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.825 -1.366 -2.204 3.834 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.184 6.184 3 C 0.186 3.814 4 C -0.334 4.334 5 C 0.176 3.824 6 O -0.206 6.206 7 C -0.074 4.074 8 C -0.195 4.195 9 C -0.167 4.167 10 O -0.330 6.330 11 Si 0.580 3.420 12 C -0.031 4.031 13 C -0.214 4.214 14 C 0.359 3.641 15 O -0.391 6.391 16 N -0.370 5.370 17 C 0.022 3.978 18 H 0.128 0.872 19 C -0.189 4.189 20 C -0.047 4.047 21 H 0.138 0.862 22 C -0.045 4.045 23 N -0.207 5.207 24 C -0.175 4.175 25 C -0.190 4.190 26 N -0.169 5.169 27 C -0.173 4.173 28 H 0.077 0.923 29 H 0.125 0.875 30 H 0.076 0.924 31 H 0.162 0.838 32 H 0.077 0.923 33 H 0.125 0.875 34 H 0.078 0.922 35 H 0.136 0.864 36 H 0.220 0.780 37 H -0.177 1.177 38 H -0.180 1.180 39 H 0.158 0.842 40 H 0.234 0.766 41 H 0.105 0.895 42 H 0.104 0.896 43 H 0.188 0.812 44 H 0.195 0.805 45 H 0.256 0.744 46 H 0.103 0.897 47 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -2.426 -0.762 -2.004 3.238 hybrid contribution -0.816 -0.864 0.709 1.383 sum -3.242 -1.626 -1.295 3.851 Atomic orbital electron populations 1.23242 0.78195 1.04855 1.01366 1.86394 1.21208 1.25058 1.85768 1.18715 0.90608 0.84409 0.87690 1.21303 1.01142 0.91503 1.19454 1.18721 0.90440 0.84689 0.88512 1.86169 1.19453 1.28470 1.86510 1.23221 0.77820 1.04676 1.01633 1.19372 0.90765 0.96291 1.13113 1.24794 1.10695 0.92846 0.88386 1.86656 1.80074 1.49948 1.16290 0.95263 0.74235 0.82430 0.90101 1.20903 0.99352 0.90070 0.92752 1.18985 0.90596 0.93435 1.18384 1.17794 0.81530 0.88653 0.76147 1.90852 1.71290 1.28674 1.48292 1.45568 1.05840 1.08857 1.76700 1.21718 0.91074 0.88785 0.96201 0.87189 1.23568 0.95908 1.00170 0.99214 1.21138 0.85858 1.00694 0.96982 0.86246 1.22939 0.96316 0.82926 1.02354 1.70244 0.97728 1.32051 1.20647 1.22410 0.99416 0.90972 1.04734 1.22818 0.83299 1.02581 1.10306 1.43269 1.08834 1.14248 1.50520 1.23407 0.94288 1.03681 0.95888 0.92329 0.87471 0.92415 0.83759 0.92261 0.87488 0.92190 0.86362 0.78028 1.17693 1.18047 0.84237 0.76616 0.89531 0.89562 0.81221 0.80514 0.74377 0.89692 0.88431 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.27 -0.81 8.56 -40.59 -0.35 -1.16 16 3 C 0.24 0.50 6.69 -38.74 -0.26 0.24 16 4 C -0.31 -0.12 8.01 -39.35 -0.32 -0.44 16 5 C 0.22 0.20 6.67 -39.07 -0.26 -0.06 16 6 O -0.30 -0.27 9.80 -18.87 -0.18 -0.46 16 7 C 0.02 -0.05 9.80 101.05 0.99 0.94 16 8 C -0.19 -0.04 5.27 -104.52 -0.55 -0.59 16 9 C -0.06 0.00 2.37 36.01 0.09 0.09 16 10 O -0.52 -0.77 12.88 -35.23 -0.45 -1.23 16 11 Si 0.68 -1.04 30.23 -169.99 -5.14 -6.18 16 12 C -0.01 0.01 8.14 -39.23 -0.32 -0.31 16 13 C -0.21 -0.34 5.89 -104.84 -0.62 -0.96 16 14 C 0.57 1.50 7.76 -12.58 -0.10 1.40 16 15 O -0.52 -3.23 14.77 -16.67 -0.25 -3.47 16 16 N -0.72 0.38 5.21 -54.13 -0.28 0.10 16 17 C 0.13 -0.13 4.30 -67.11 -0.29 -0.42 16 18 H 0.11 0.04 7.50 -51.93 -0.39 -0.35 16 19 C -0.15 0.31 7.38 -25.78 -0.19 0.12 16 20 C -0.03 0.03 4.18 -90.82 -0.38 -0.35 16 21 H 0.12 -0.21 8.14 -51.93 -0.42 -0.63 16 22 C 0.22 0.28 7.37 -155.41 -1.14 -0.87 16 23 N -0.49 -1.95 11.25 -10.81 -0.12 -2.07 16 24 C -0.03 -0.06 11.87 -17.81 -0.21 -0.27 16 25 C -0.06 0.00 12.04 -16.56 -0.20 -0.20 16 26 N -0.56 0.35 5.94 -10.23 -0.06 0.29 16 27 C -0.13 0.23 7.37 -25.92 -0.19 0.04 16 28 H 0.06 -0.16 7.66 -51.93 -0.40 -0.55 16 29 H 0.11 -0.25 8.14 -51.93 -0.42 -0.67 16 30 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 31 H 0.14 -0.26 4.50 -52.48 -0.24 -0.49 16 32 H 0.06 -0.19 7.65 -51.93 -0.40 -0.58 16 33 H 0.11 -0.40 8.14 -51.93 -0.42 -0.82 16 34 H 0.06 -0.22 7.65 -51.93 -0.40 -0.61 16 35 H 0.12 0.00 7.82 -51.93 -0.41 -0.40 16 36 H 0.37 -0.60 8.70 45.56 0.40 -0.20 16 37 H -0.25 -0.51 7.11 56.52 0.40 -0.11 16 38 H -0.26 0.27 6.69 56.52 0.38 0.65 16 39 H 0.14 -0.39 3.16 -52.48 -0.17 -0.55 16 40 H 0.40 -1.07 6.72 -40.82 -0.27 -1.35 16 41 H 0.09 -0.28 6.66 -51.93 -0.35 -0.63 16 42 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 43 H 0.17 0.06 8.06 -52.49 -0.42 -0.37 16 44 H 0.18 -0.54 8.06 -52.49 -0.42 -0.96 16 45 H 0.42 -1.40 7.54 -40.82 -0.31 -1.71 16 46 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 47 H 0.10 -0.17 8.09 -51.92 -0.42 -0.59 16 LS Contribution 385.45 15.07 5.81 5.81 Total: 0.00 -11.75 385.45 -9.90 -21.65 By element: Atomic # 1 Polarization: -6.68 SS G_CDS: -5.92 Total: -12.60 kcal Atomic # 6 Polarization: 2.28 SS G_CDS: -2.96 Total: -0.67 kcal Atomic # 7 Polarization: -1.22 SS G_CDS: -0.46 Total: -1.69 kcal Atomic # 8 Polarization: -5.09 SS G_CDS: -1.23 Total: -6.32 kcal Atomic # 14 Polarization: -1.04 SS G_CDS: -5.14 Total: -6.18 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -11.75 -9.90 -21.65 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16970406_12297780.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.980 kcal (2) G-P(sol) polarization free energy of solvation -11.753 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 0.228 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.902 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.655 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.674 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds