Wall clock time and date at job start Tue Mar 9 2021 14:06:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86296 * 109.47157 * 2 1 4 4 C 1.50704 * 109.47275 * 120.00076 * 2 1 3 5 5 C 1.38193 * 119.83853 * 14.99913 * 4 2 1 6 6 C 1.38307 * 120.14347 * 180.02562 * 5 4 2 7 7 F 1.35104 * 120.08452 * 179.97438 * 6 5 4 8 8 C 1.39806 * 119.83143 * 0.25499 * 6 5 4 9 9 C 1.47699 * 120.15430 * 179.72415 * 8 6 5 10 10 O 1.21567 * 120.00099 * 0.02562 * 9 8 6 11 11 N 1.34777 * 120.00245 * 179.97438 * 9 8 6 12 12 C 1.46502 * 120.00324 * 180.02562 * 11 9 8 13 13 H 1.09000 * 112.84543 * 23.80367 * 12 11 9 14 14 C 1.53779 * 113.61469 * 155.00312 * 12 11 9 15 15 C 1.53782 * 87.08109 * 89.11312 * 14 12 11 16 16 H 1.08997 * 113.61591 * 270.79495 * 15 14 12 17 17 C 1.50703 * 113.61064 * 139.97888 * 15 14 12 18 18 N 1.30500 * 125.64728 * 95.02756 * 17 15 14 19 19 C 1.34126 * 109.25358 * 180.02562 * 18 17 15 20 20 C 1.34662 * 108.02607 * 359.97438 * 19 18 17 21 21 N 1.35043 * 125.65188 * 274.71628 * 17 15 14 22 22 C 1.53774 * 87.08193 * 25.43267 * 15 14 12 23 23 C 1.39661 * 119.68988 * 359.40230 * 8 6 5 24 24 C 1.38063 * 119.84669 * 0.64385 * 23 8 6 25 25 F 1.35104 * 119.91347 * 179.67675 * 24 23 8 26 26 H 0.96697 * 114.00243 * 299.99366 * 1 2 3 27 27 H 1.09003 * 109.47236 * 239.99760 * 2 1 3 28 28 H 1.48504 * 110.00229 * 178.67643 * 3 2 1 29 29 H 1.48498 * 110.00216 * 300.00101 * 3 2 1 30 30 H 1.07998 * 119.92785 * 0.02562 * 5 4 2 31 31 H 0.97006 * 119.99673 * 0.02562 * 11 9 8 32 32 H 1.08997 * 113.61035 * 203.66367 * 14 12 11 33 33 H 1.09001 * 113.61334 * 334.56971 * 14 12 11 34 34 H 1.08003 * 125.98841 * 179.97438 * 19 18 17 35 35 H 1.08005 * 126.59923 * 180.02562 * 20 19 18 36 36 H 0.97000 * 126.39185 * 0.02562 * 21 17 15 37 37 H 1.09000 * 113.61646 * 220.01721 * 22 15 14 38 38 H 1.09000 * 113.61714 * 89.11374 * 22 15 14 39 39 H 1.07999 * 120.06984 * 180.31288 * 23 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.0689 -1.4962 1.9710 6 6 1.5231 -2.1506 3.1017 7 9 0.6788 -2.9182 3.8251 8 6 2.8567 -2.0112 3.4974 9 6 3.3478 -2.7019 4.7070 10 8 2.5920 -3.3940 5.3608 11 7 4.6342 -2.5657 5.0854 12 6 5.1215 -3.2513 6.2849 13 1 4.5261 -4.1270 6.5431 14 6 6.6358 -3.5186 6.2693 15 6 6.8068 -2.1377 6.9242 16 1 6.9065 -1.3234 6.2065 17 6 7.8648 -2.1052 7.9969 18 7 9.1078 -1.7451 7.8284 19 6 9.7582 -1.8405 8.9975 20 6 8.8851 -2.2757 9.9258 21 7 7.6823 -2.4382 9.2928 22 6 5.3798 -2.3078 7.4715 23 6 3.7241 -1.2211 2.7398 24 6 3.2566 -0.5729 1.6139 25 9 4.0929 0.1970 0.8837 26 1 -0.3933 0.4416 0.7651 27 1 1.7923 -0.5139 -0.8900 28 1 3.5346 1.7703 0.0322 29 1 1.5614 2.4679 -1.2084 30 1 0.0380 -1.5996 1.6662 31 1 5.2374 -2.0137 4.5634 32 1 6.9396 -4.3463 6.9101 33 1 7.0578 -3.5813 5.2663 34 1 10.7997 -1.6089 9.1651 35 1 9.0926 -2.4572 10.9701 36 1 6.8543 -2.7392 9.6985 37 1 4.7878 -1.3932 7.4390 38 1 5.3402 -2.8046 8.4409 39 1 4.7567 -1.1131 3.0370 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16970406_12360598.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:06:20 Heat of formation + Delta-G solvation = -20.886223 kcal Electronic energy + Delta-G solvation = -28094.597242 eV Core-core repulsion = 23642.598541 eV Total energy + Delta-G solvation = -4451.998701 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.107 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -50.49150 -49.99417 -43.13728 -41.58154 -40.39655 -39.24192 -37.76389 -34.84295 -33.44996 -32.99823 -31.50660 -30.61167 -28.15474 -27.03760 -26.31492 -24.31154 -24.01928 -22.64115 -22.06978 -21.80309 -20.66098 -19.75132 -19.19771 -18.98868 -18.55001 -17.88145 -17.56985 -17.31990 -16.99822 -16.69970 -16.29927 -16.11942 -15.95852 -15.85829 -15.77740 -15.62895 -15.48930 -15.14574 -14.70839 -14.58922 -14.43111 -14.16917 -13.80918 -13.75207 -13.61634 -13.30499 -13.02524 -12.66062 -12.60450 -12.05345 -11.69761 -11.55948 -11.13036 -11.08946 -10.99354 -10.98451 -10.38413 -10.29111 -9.77407 -9.36786 -5.13316 -0.84066 -0.37165 1.02996 1.05037 1.42811 1.56081 1.70679 1.90891 2.08966 2.16064 2.24241 2.71526 2.75398 2.99707 3.06614 3.11464 3.22294 3.34395 3.36806 3.47012 3.59300 3.70121 3.88780 4.04833 4.08954 4.22418 4.29180 4.35762 4.38973 4.45440 4.49822 4.56360 4.62241 4.65996 4.67517 4.69811 4.78633 4.86132 5.11489 5.28924 5.34443 5.78181 6.17357 6.25611 6.34393 6.93342 7.12837 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.072 4.072 3 Si 0.687 3.313 4 C -0.090 4.090 5 C -0.125 4.125 6 C 0.163 3.837 7 F -0.105 7.105 8 C -0.152 4.152 9 C 0.565 3.435 10 O -0.512 6.512 11 N -0.708 5.708 12 C 0.125 3.875 13 H 0.113 0.887 14 C -0.132 4.132 15 C -0.026 4.026 16 H 0.119 0.881 17 C 0.217 3.783 18 N -0.487 5.487 19 C -0.027 4.027 20 C -0.055 4.055 21 N -0.565 5.565 22 C -0.149 4.149 23 C -0.084 4.084 24 C 0.075 3.925 25 F -0.117 7.117 26 H 0.383 0.617 27 H 0.131 0.869 28 H -0.225 1.225 29 H -0.256 1.256 30 H 0.164 0.836 31 H 0.403 0.597 32 H 0.099 0.901 33 H 0.086 0.914 34 H 0.171 0.829 35 H 0.178 0.822 36 H 0.418 0.582 37 H 0.085 0.915 38 H 0.089 0.911 39 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.052 2.051 2.359 3.126 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.181 4.181 3 Si 0.586 3.414 4 C -0.091 4.091 5 C -0.144 4.144 6 C 0.142 3.858 7 F -0.083 7.083 8 C -0.156 4.156 9 C 0.351 3.649 10 O -0.387 6.387 11 N -0.360 5.360 12 C 0.019 3.981 13 H 0.131 0.869 14 C -0.171 4.171 15 C -0.046 4.046 16 H 0.137 0.863 17 C -0.047 4.047 18 N -0.206 5.206 19 C -0.175 4.175 20 C -0.189 4.189 21 N -0.169 5.169 22 C -0.188 4.188 23 C -0.104 4.104 24 C 0.056 3.944 25 F -0.096 7.096 26 H 0.231 0.769 27 H 0.148 0.852 28 H -0.149 1.149 29 H -0.181 1.181 30 H 0.181 0.819 31 H 0.239 0.761 32 H 0.118 0.882 33 H 0.105 0.895 34 H 0.188 0.812 35 H 0.196 0.804 36 H 0.256 0.744 37 H 0.104 0.896 38 H 0.107 0.893 39 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 0.487 2.092 1.131 2.428 hybrid contribution -0.148 -0.798 0.732 1.093 sum 0.339 1.294 1.863 2.293 Atomic orbital electron populations 1.86532 1.16436 1.81401 1.49607 1.25160 0.85799 1.10723 0.96447 0.95158 0.81983 0.75728 0.88553 1.20463 0.92204 0.98043 0.98422 1.20855 1.02493 0.97310 0.93740 1.17618 0.86614 0.91199 0.90371 1.91655 1.69161 1.71686 1.75815 1.19799 0.93480 1.03653 0.98684 1.17829 0.82190 0.80950 0.83884 1.90894 1.55167 1.38392 1.54223 1.45522 1.10799 1.51388 1.28290 1.21808 0.95514 0.96188 0.84583 0.86880 1.23409 0.94231 0.96796 1.02669 1.21079 0.89642 0.99741 0.94114 0.86296 1.22907 0.94342 1.02998 0.84497 1.70241 1.03278 1.20183 1.26904 1.22418 1.00509 1.05827 0.88753 1.22834 0.85621 1.10116 1.00299 1.43267 1.11923 1.52093 1.09607 1.23522 0.95272 1.01414 0.98634 1.21117 1.00547 0.95415 0.93281 1.17213 0.87964 0.96379 0.92874 1.91610 1.70810 1.71561 1.75592 0.76929 0.85249 1.14885 1.18102 0.81888 0.76124 0.88248 0.89511 0.81157 0.80443 0.74370 0.89621 0.89301 0.83077 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 1.03 11.63 -35.23 -0.41 0.62 16 2 C -0.07 0.14 2.96 36.01 0.11 0.25 16 3 Si 0.69 -1.44 30.81 -169.99 -5.24 -6.67 16 4 C -0.09 0.16 5.14 -104.49 -0.54 -0.38 16 5 C -0.13 0.18 9.20 -39.57 -0.36 -0.18 16 6 C 0.16 0.09 7.28 -38.97 -0.28 -0.20 16 7 F -0.11 -0.34 15.55 2.25 0.04 -0.30 16 8 C -0.15 0.05 5.88 -104.92 -0.62 -0.56 16 9 C 0.56 0.53 7.77 -12.40 -0.10 0.43 16 10 O -0.51 -2.52 14.94 5.31 0.08 -2.44 16 11 N -0.71 1.55 5.21 -54.00 -0.28 1.26 16 12 C 0.12 -0.28 4.33 -67.12 -0.29 -0.57 16 13 H 0.11 -0.09 7.46 -51.93 -0.39 -0.48 16 14 C -0.13 0.37 7.38 -25.92 -0.19 0.18 16 15 C -0.03 0.05 4.17 -90.96 -0.38 -0.32 16 16 H 0.12 -0.31 8.14 -51.93 -0.42 -0.73 16 17 C 0.22 0.15 7.36 -155.41 -1.14 -1.00 16 18 N -0.49 -1.72 11.25 -10.82 -0.12 -1.84 16 19 C -0.03 -0.05 11.87 -17.82 -0.21 -0.26 16 20 C -0.06 0.02 12.04 -16.56 -0.20 -0.18 16 21 N -0.57 0.64 5.94 -10.23 -0.06 0.57 16 22 C -0.15 0.45 7.35 -25.92 -0.19 0.26 16 23 C -0.08 0.20 9.52 -39.11 -0.37 -0.17 16 24 C 0.08 -0.12 6.65 -39.49 -0.26 -0.38 16 25 F -0.12 0.04 12.80 2.25 0.03 0.07 16 26 H 0.38 -2.29 8.42 45.56 0.38 -1.90 16 27 H 0.13 -0.21 7.96 -51.93 -0.41 -0.62 16 28 H -0.23 -0.03 5.27 56.52 0.30 0.27 16 29 H -0.26 -0.34 7.11 56.52 0.40 0.07 16 30 H 0.16 -0.44 7.06 -52.49 -0.37 -0.81 16 31 H 0.40 -1.89 6.73 -40.82 -0.27 -2.16 16 32 H 0.10 -0.26 8.09 -51.93 -0.42 -0.68 16 33 H 0.09 -0.26 8.14 -51.93 -0.42 -0.69 16 34 H 0.17 -0.01 8.06 -52.48 -0.42 -0.43 16 35 H 0.18 -0.61 8.06 -52.48 -0.42 -1.03 16 36 H 0.42 -1.63 7.53 -40.82 -0.31 -1.94 16 37 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 38 H 0.09 -0.36 6.64 -51.93 -0.34 -0.71 16 39 H 0.15 -0.78 6.41 -52.49 -0.34 -1.12 16 LS Contribution 336.23 15.07 5.07 5.07 Total: 0.00 -10.51 336.23 -9.82 -20.33 By element: Atomic # 1 Polarization: -9.71 SS G_CDS: -3.89 Total: -13.60 kcal Atomic # 6 Polarization: 1.96 SS G_CDS: -5.03 Total: -3.08 kcal Atomic # 7 Polarization: 0.46 SS G_CDS: -0.46 Total: 0.00 kcal Atomic # 8 Polarization: -1.49 SS G_CDS: -0.33 Total: -1.82 kcal Atomic # 9 Polarization: -0.29 SS G_CDS: 0.06 Total: -0.23 kcal Atomic # 14 Polarization: -1.44 SS G_CDS: -5.24 Total: -6.67 kcal Total LS contribution 5.07 Total: 5.07 kcal Total: -10.51 -9.82 -20.33 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16970406_12360598.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.553 kcal (2) G-P(sol) polarization free energy of solvation -10.514 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.067 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.819 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.334 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.886 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds