Wall clock time and date at job start Tue Mar 9 2021 14:07:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.38972 * 119.95202 * 2 1 4 4 O 1.35709 * 119.91680 * 359.97438 * 3 2 1 5 5 C 1.39015 * 120.17228 * 179.97438 * 3 2 1 6 6 C 1.50703 * 119.95508 * 180.02562 * 5 3 2 7 7 O 1.42897 * 109.47264 * 75.00413 * 6 5 3 8 8 Si 1.86307 * 109.46805 * 195.00217 * 6 5 3 9 9 C 1.37690 * 120.09043 * 359.79014 * 5 3 2 10 10 C 1.39751 * 119.90517 * 0.44396 * 9 5 3 11 11 C 1.47603 * 120.08424 * 179.81473 * 10 9 5 12 12 O 1.21586 * 119.99921 * 359.71958 * 11 10 9 13 13 N 1.34781 * 120.00185 * 179.72211 * 11 10 9 14 14 C 1.46497 * 119.99914 * 179.97438 * 13 11 10 15 15 H 1.08994 * 112.84849 * 336.19233 * 14 13 11 16 16 C 1.53959 * 113.61331 * 107.46648 * 14 13 11 17 17 C 1.53788 * 87.01955 * 89.19474 * 16 14 13 18 18 H 1.09000 * 113.61148 * 270.77035 * 17 16 14 19 19 C 1.50700 * 113.60880 * 139.95054 * 17 16 14 20 20 N 1.30502 * 125.64425 * 166.13902 * 19 17 16 21 21 C 1.34127 * 109.25683 * 180.14781 * 20 19 17 22 22 C 1.34672 * 108.01948 * 359.61488 * 21 20 19 23 23 N 1.35041 * 125.65474 * 345.86027 * 19 17 16 24 24 C 1.53777 * 87.17253 * 25.36080 * 17 16 14 25 25 C 1.37719 * 119.95588 * 179.97438 * 2 1 3 26 26 H 1.08997 * 109.47904 * 270.02343 * 1 2 3 27 27 H 1.09009 * 109.46915 * 30.02684 * 1 2 3 28 28 H 1.09000 * 109.47223 * 150.01881 * 1 2 3 29 29 H 0.96704 * 114.00034 * 90.00144 * 4 3 2 30 30 H 1.08993 * 109.47367 * 314.99988 * 6 5 3 31 31 H 0.96698 * 114.00165 * 180.02562 * 7 6 5 32 32 H 1.48497 * 109.99916 * 299.99791 * 8 6 5 33 33 H 1.48501 * 110.00119 * 61.32313 * 8 6 5 34 34 H 1.07995 * 120.04493 * 180.22787 * 9 5 3 35 35 H 0.96998 * 119.99612 * 359.97438 * 13 11 10 36 36 H 1.08996 * 113.66464 * 334.66530 * 16 14 13 37 37 H 1.08998 * 113.61036 * 203.71261 * 16 14 13 38 38 H 1.08002 * 125.99481 * 179.88589 * 21 20 19 39 39 H 1.07996 * 126.59510 * 180.20974 * 22 21 20 40 40 H 0.96995 * 126.39762 * 0.02562 * 23 19 17 41 41 H 1.09000 * 113.61877 * 89.15774 * 24 17 16 42 42 H 1.09000 * 113.61569 * 220.05868 * 24 17 16 43 43 H 1.08004 * 120.04005 * 359.97438 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2009 1.2041 0.0000 4 8 1.5197 2.3778 -0.0005 5 6 3.5910 1.2095 0.0005 6 6 4.3385 2.5181 0.0011 7 8 4.2716 3.1043 1.3026 8 14 6.1199 2.2158 -0.4530 9 6 4.2859 0.0208 0.0054 10 6 3.5918 -1.1921 0.0005 11 6 4.3328 -2.4687 0.0016 12 8 5.5486 -2.4659 0.0016 13 7 3.6616 -3.6375 0.0025 14 6 4.3971 -4.9045 0.0030 15 1 5.4042 -4.8094 -0.4028 16 6 4.3409 -5.6496 1.3491 17 6 3.0646 -6.3308 0.8273 18 1 2.1519 -5.7794 1.0531 19 6 2.9701 -7.7914 1.1863 20 7 1.8977 -8.5293 1.0943 21 6 2.1819 -9.7753 1.5014 22 6 3.4818 -9.8130 1.8512 23 7 3.9824 -8.5547 1.6514 24 6 3.6015 -6.0787 -0.5915 25 6 2.1947 -1.1932 0.0005 26 1 -0.3635 0.0004 1.0276 27 1 -0.3633 0.8898 -0.5143 28 1 -0.3634 -0.8901 -0.5135 29 1 1.3219 2.7182 0.8828 30 1 3.8881 3.1941 -0.7255 31 1 4.7322 3.9513 1.3766 32 1 6.7455 1.2954 0.5303 33 1 6.2049 1.6357 -1.8173 34 1 5.3659 0.0258 0.0096 35 1 2.6916 -3.6397 0.0027 36 1 4.1686 -4.9960 2.2041 37 1 5.1720 -6.3381 1.5019 38 1 1.4906 -10.6043 1.5378 39 1 4.0250 -10.6710 2.2189 40 1 4.8937 -8.2653 1.8140 41 1 4.2302 -6.8846 -0.9702 42 1 2.8333 -5.7710 -1.3008 43 1 1.6546 -2.1285 0.0014 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16970406_13287732.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:07:11 Heat of formation + Delta-G solvation = 9.063595 kcal Electronic energy + Delta-G solvation = -27485.406617 eV Core-core repulsion = 23499.394778 eV Total energy + Delta-G solvation = -3986.011839 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.141 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -43.12556 -41.81385 -40.86605 -39.32427 -37.78568 -37.52706 -34.78607 -34.10254 -33.42812 -31.94266 -30.49205 -28.13854 -27.01971 -26.99549 -26.41849 -24.71250 -22.62916 -22.06145 -21.77176 -21.62438 -20.59954 -19.57666 -19.14787 -18.57125 -18.42121 -17.78592 -16.95380 -16.68114 -16.36656 -16.02146 -15.95960 -15.56796 -15.53153 -15.35126 -15.12258 -14.95336 -14.59034 -14.53304 -14.40812 -13.93609 -13.79438 -13.70607 -13.60482 -13.50985 -13.02885 -12.95778 -12.63682 -12.60560 -12.02419 -11.93832 -11.67480 -11.53641 -11.09356 -10.99088 -10.97224 -10.36203 -10.29550 -10.04569 -9.71554 -9.35744 -4.99567 -0.44328 0.00763 1.05742 1.25526 1.55226 1.68129 1.84906 2.00192 2.10653 2.17113 2.48836 3.04339 3.14012 3.20485 3.24818 3.40899 3.49247 3.57329 3.61726 3.73424 3.87471 3.92368 4.09544 4.10769 4.25731 4.34565 4.38088 4.42048 4.46272 4.50113 4.55014 4.58542 4.61256 4.65447 4.71916 4.80323 4.89049 4.94789 5.02853 5.04662 5.12803 5.22240 5.34926 5.47313 5.79010 6.29236 6.35167 6.52444 6.53825 7.04614 7.13695 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 C -0.116 4.116 3 C 0.163 3.837 4 O -0.488 6.488 5 C -0.105 4.105 6 C -0.065 4.065 7 O -0.547 6.547 8 Si 0.679 3.321 9 C -0.053 4.053 10 C -0.140 4.140 11 C 0.566 3.434 12 O -0.531 6.531 13 N -0.709 5.709 14 C 0.124 3.876 15 H 0.112 0.888 16 C -0.149 4.149 17 C -0.025 4.025 18 H 0.119 0.881 19 C 0.217 3.783 20 N -0.487 5.487 21 C -0.027 4.027 22 C -0.055 4.055 23 N -0.565 5.565 24 C -0.132 4.132 25 C -0.065 4.065 26 H 0.074 0.926 27 H 0.078 0.922 28 H 0.072 0.928 29 H 0.400 0.600 30 H 0.081 0.919 31 H 0.385 0.615 32 H -0.245 1.245 33 H -0.252 1.252 34 H 0.139 0.861 35 H 0.403 0.597 36 H 0.084 0.916 37 H 0.088 0.912 38 H 0.171 0.829 39 H 0.178 0.822 40 H 0.418 0.582 41 H 0.098 0.902 42 H 0.086 0.914 43 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.168 2.045 1.175 2.364 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.116 4.116 3 C 0.118 3.882 4 O -0.299 6.299 5 C -0.106 4.106 6 C -0.175 4.175 7 O -0.354 6.354 8 Si 0.580 3.420 9 C -0.071 4.071 10 C -0.143 4.143 11 C 0.354 3.646 12 O -0.408 6.408 13 N -0.361 5.361 14 C 0.018 3.982 15 H 0.130 0.870 16 C -0.189 4.189 17 C -0.045 4.045 18 H 0.137 0.863 19 C -0.047 4.047 20 N -0.206 5.206 21 C -0.175 4.175 22 C -0.189 4.189 23 N -0.169 5.169 24 C -0.171 4.171 25 C -0.084 4.084 26 H 0.093 0.907 27 H 0.097 0.903 28 H 0.091 0.909 29 H 0.259 0.741 30 H 0.099 0.901 31 H 0.233 0.767 32 H -0.170 1.170 33 H -0.177 1.177 34 H 0.156 0.844 35 H 0.239 0.761 36 H 0.103 0.897 37 H 0.106 0.894 38 H 0.189 0.811 39 H 0.196 0.804 40 H 0.256 0.744 41 H 0.117 0.883 42 H 0.105 0.895 43 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 0.181 1.070 0.183 1.100 hybrid contribution 0.115 -0.551 0.950 1.104 sum 0.296 0.519 1.132 1.280 Atomic orbital electron populations 1.20747 0.89453 1.03932 1.02960 1.20212 0.97450 0.91939 1.02028 1.18265 0.88629 0.85439 0.95900 1.84641 1.75572 1.35624 1.34113 1.19614 0.93191 0.93917 1.03877 1.24534 1.10137 0.93856 0.89004 1.86425 1.79406 1.40762 1.28804 0.95413 0.77994 0.88075 0.80550 1.20982 1.00239 0.90527 0.95357 1.19725 0.93559 0.93115 1.07919 1.18127 0.87189 0.83510 0.75758 1.90813 1.13367 1.87456 1.49133 1.45542 1.10218 1.04747 1.75552 1.21832 0.97639 0.82365 0.96364 0.87039 1.23556 0.96945 0.99430 0.98946 1.21072 0.99790 0.86643 0.97014 0.86307 1.22909 0.83918 0.95307 1.02557 1.70242 1.26391 1.03398 1.20584 1.22421 0.94597 0.95639 1.04848 1.22834 0.97077 0.88604 1.10385 1.43264 1.12939 1.09809 1.50876 1.23405 1.00176 0.97514 0.96014 1.21106 0.92386 0.97987 0.96885 0.90706 0.90305 0.90911 0.74141 0.90109 0.76734 1.17023 1.17676 0.84352 0.76086 0.89688 0.89373 0.81141 0.80443 0.74385 0.88319 0.89515 0.84778 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.20 9.78 36.01 0.35 0.55 16 2 C -0.12 -0.04 5.89 -104.54 -0.62 -0.65 16 3 C 0.16 0.25 6.66 -39.02 -0.26 -0.01 16 4 O -0.49 -0.13 11.84 -18.83 -0.22 -0.35 16 5 C -0.11 -0.27 5.30 -104.53 -0.55 -0.82 16 6 C -0.06 -0.03 2.36 36.01 0.09 0.06 16 7 O -0.55 0.18 12.86 -35.23 -0.45 -0.27 16 8 Si 0.68 0.07 30.20 -169.99 -5.13 -5.06 16 9 C -0.05 -0.19 8.20 -39.22 -0.32 -0.51 16 10 C -0.14 -0.33 5.87 -104.96 -0.62 -0.94 16 11 C 0.57 1.66 7.76 -12.44 -0.10 1.57 16 12 O -0.53 -3.55 15.94 5.29 0.08 -3.46 16 13 N -0.71 0.41 5.21 -53.94 -0.28 0.13 16 14 C 0.12 -0.12 4.33 -67.02 -0.29 -0.41 16 15 H 0.11 0.05 7.46 -51.93 -0.39 -0.34 16 16 C -0.15 0.28 7.38 -25.82 -0.19 0.09 16 17 C -0.03 0.03 4.16 -90.96 -0.38 -0.35 16 18 H 0.12 -0.20 8.14 -51.93 -0.42 -0.62 16 19 C 0.22 0.28 7.36 -155.42 -1.14 -0.86 16 20 N -0.49 -1.96 11.25 -10.81 -0.12 -2.08 16 21 C -0.03 -0.06 11.87 -17.81 -0.21 -0.27 16 22 C -0.06 0.00 12.04 -16.56 -0.20 -0.20 16 23 N -0.57 0.31 5.94 -10.23 -0.06 0.25 16 24 C -0.13 0.25 7.38 -25.92 -0.19 0.06 16 25 C -0.06 0.01 9.18 -39.22 -0.36 -0.35 16 26 H 0.07 -0.19 8.14 -51.93 -0.42 -0.62 16 27 H 0.08 -0.10 7.52 -51.92 -0.39 -0.49 16 28 H 0.07 -0.20 8.08 -51.93 -0.42 -0.62 16 29 H 0.40 -1.26 9.06 45.56 0.41 -0.85 16 30 H 0.08 -0.04 7.82 -51.93 -0.41 -0.45 16 31 H 0.38 -1.97 8.74 45.56 0.40 -1.57 16 32 H -0.25 -0.86 6.74 56.52 0.38 -0.48 16 33 H -0.25 -0.78 7.11 56.52 0.40 -0.38 16 34 H 0.14 0.66 4.47 -52.49 -0.23 0.43 16 35 H 0.40 -1.25 6.73 -40.82 -0.27 -1.52 16 36 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 37 H 0.09 -0.28 6.64 -51.93 -0.34 -0.62 16 38 H 0.17 0.05 8.06 -52.49 -0.42 -0.37 16 39 H 0.18 -0.54 8.06 -52.49 -0.42 -0.96 16 40 H 0.42 -1.37 7.54 -40.82 -0.31 -1.68 16 41 H 0.10 -0.19 8.09 -51.93 -0.42 -0.61 16 42 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 43 H 0.13 -0.44 6.39 -52.48 -0.34 -0.78 16 LS Contribution 359.85 15.07 5.42 5.42 Total: 0.00 -11.90 359.85 -10.22 -22.12 By element: Atomic # 1 Polarization: -9.19 SS G_CDS: -4.47 Total: -13.65 kcal Atomic # 6 Polarization: 1.94 SS G_CDS: -4.99 Total: -3.05 kcal Atomic # 7 Polarization: -1.23 SS G_CDS: -0.46 Total: -1.70 kcal Atomic # 8 Polarization: -3.49 SS G_CDS: -0.59 Total: -4.08 kcal Atomic # 14 Polarization: 0.07 SS G_CDS: -5.13 Total: -5.06 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -11.90 -10.22 -22.12 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16970406_13287732.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 31.187 kcal (2) G-P(sol) polarization free energy of solvation -11.900 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 19.286 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.223 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.123 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.064 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds