Wall clock time and date at job start Tue Mar 9 2021 14:08:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86297 * 109.47276 * 2 1 4 4 C 1.50705 * 109.46957 * 239.99679 * 2 1 3 5 5 C 1.38270 * 119.93813 * 120.27839 * 4 2 1 6 6 C 1.38147 * 120.05177 * 180.24023 * 5 4 2 7 7 C 1.38736 * 119.94540 * 359.46077 * 6 5 4 8 8 O 1.35892 * 120.05957 * 180.26040 * 7 6 5 9 9 C 1.42899 * 117.00396 * 180.02562 * 8 7 6 10 10 C 1.50699 * 109.47210 * 179.97438 * 9 8 7 11 11 O 1.21281 * 120.00226 * 0.02562 * 10 9 8 12 12 N 1.34779 * 119.99660 * 180.02562 * 10 9 8 13 13 C 1.46505 * 119.99925 * 180.02562 * 12 10 9 14 14 H 1.09000 * 112.84851 * 25.32388 * 13 12 10 15 15 C 1.53777 * 113.61680 * 156.52495 * 13 12 10 16 16 C 1.53780 * 87.08223 * 89.11496 * 15 13 12 17 17 H 1.09002 * 113.61158 * 270.88542 * 16 15 13 18 18 C 1.50690 * 113.61281 * 139.98100 * 16 15 13 19 19 N 1.30507 * 125.64997 * 94.69445 * 18 16 15 20 20 C 1.34126 * 109.25622 * 179.88989 * 19 18 16 21 21 C 1.34666 * 108.02108 * 0.36857 * 20 19 18 22 22 N 1.35042 * 125.65252 * 274.99855 * 18 16 15 23 23 C 1.53776 * 113.61157 * 254.13452 * 13 12 10 24 24 C 1.38740 * 119.88595 * 0.28283 * 7 6 5 25 25 C 1.38146 * 119.94197 * 359.97438 * 24 7 6 26 26 H 0.96695 * 113.99875 * 59.99881 * 1 2 3 27 27 H 1.09002 * 109.47438 * 120.00333 * 2 1 3 28 28 H 1.48497 * 110.00036 * 60.00230 * 3 2 1 29 29 H 1.48499 * 109.99739 * 181.32129 * 3 2 1 30 30 H 1.07995 * 119.98059 * 359.97438 * 5 4 2 31 31 H 1.08002 * 120.03108 * 179.74549 * 6 5 4 32 32 H 1.08997 * 109.47463 * 300.00468 * 9 8 7 33 33 H 1.09002 * 109.46662 * 59.99805 * 9 8 7 34 34 H 0.96996 * 120.00073 * 359.97438 * 12 10 9 35 35 H 1.08997 * 113.61338 * 203.66638 * 15 13 12 36 36 H 1.09004 * 113.61200 * 334.48066 * 15 13 12 37 37 H 1.07997 * 125.98897 * 180.11312 * 20 19 18 38 38 H 1.08004 * 126.59381 * 179.73977 * 21 20 19 39 39 H 0.96996 * 126.39789 * 359.94227 * 22 18 16 40 40 H 1.08999 * 113.62209 * 25.42966 * 23 13 12 41 41 H 1.09002 * 113.61275 * 156.33329 * 23 13 12 42 42 H 1.07993 * 120.02463 * 180.02562 * 24 7 6 43 43 H 1.08006 * 119.96944 * 179.97438 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2305 5 6 2.7309 -0.0391 -2.1369 6 6 3.1886 -0.6866 -3.2682 7 6 2.8545 -2.0150 -3.4887 8 8 3.3078 -2.6557 -4.5980 9 6 2.9238 -4.0226 -4.7602 10 6 3.5148 -4.5623 -6.0371 11 8 4.1980 -3.8470 -6.7389 12 7 3.2841 -5.8398 -6.3992 13 6 3.8591 -6.3647 -7.6402 14 1 4.7610 -5.8346 -7.9462 15 6 4.0106 -7.8950 -7.6501 16 6 2.5847 -7.9538 -8.2231 17 1 1.8086 -7.9977 -7.4591 18 6 2.4089 -8.9946 -9.2985 19 7 1.9713 -10.2105 -9.1160 20 6 1.9433 -10.8520 -10.2936 21 6 2.3879 -10.0041 -11.2406 22 7 2.6834 -8.8257 -10.6099 23 6 2.8313 -6.5354 -8.7713 24 6 2.0565 -2.6880 -2.5749 25 6 1.5970 -2.0343 -1.4479 26 1 -0.3933 0.4417 -0.7650 27 1 1.7924 -0.5139 0.8899 28 1 1.5616 2.4678 1.2085 29 1 3.5346 1.7701 -0.0322 30 1 2.9944 0.9937 -1.9627 31 1 3.8097 -0.1606 -3.9780 32 1 3.2898 -4.6056 -3.9151 33 1 1.8369 -4.0916 -4.8056 34 1 2.7380 -6.4120 -5.8377 35 1 4.7738 -8.2537 -8.3406 36 1 4.1011 -8.3312 -6.6552 37 1 1.6245 -11.8714 -10.4535 38 1 2.4920 -10.2137 -12.2950 39 1 3.0256 -8.0197 -11.0271 40 1 1.9689 -5.8749 -8.6812 41 1 3.2727 -6.5231 -9.7679 42 1 1.7954 -3.7221 -2.7441 43 1 0.9753 -2.5577 -0.7364 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16970406_2989410.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:08:06 Heat of formation + Delta-G solvation = 20.533169 kcal Electronic energy + Delta-G solvation = -26342.991036 eV Core-core repulsion = 22357.476555 eV Total energy + Delta-G solvation = -3985.514481 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.141 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -43.14056 -41.67623 -41.01304 -39.61321 -38.75529 -37.13723 -34.70057 -33.44508 -32.24975 -32.01872 -30.84349 -29.50605 -27.05142 -26.46097 -26.03832 -24.11615 -22.81575 -22.43217 -21.88668 -21.78550 -20.63651 -19.57094 -19.13747 -18.45726 -18.11253 -17.54582 -17.33513 -16.85371 -16.44483 -16.22923 -15.99843 -15.81945 -15.66613 -15.45156 -15.37171 -15.03108 -14.71264 -14.60495 -14.57292 -14.21516 -14.03941 -13.86977 -13.68321 -13.41666 -13.31287 -12.68099 -12.30573 -12.17965 -12.06305 -12.05970 -11.70476 -11.69854 -11.02243 -11.00470 -10.98788 -10.44333 -10.34272 -10.08789 -9.37533 -9.23969 -5.04153 0.21657 0.31298 1.04037 1.29292 1.30737 1.35595 1.62497 1.97041 2.07341 2.15382 2.43510 2.63022 3.09512 3.21680 3.31247 3.43241 3.46323 3.57489 3.67172 3.69492 3.82537 3.84121 3.85998 3.88923 4.07955 4.22044 4.33730 4.35154 4.38050 4.44804 4.53092 4.53455 4.56376 4.60357 4.67494 4.77163 4.85500 4.95156 5.10741 5.13668 5.25537 5.28806 5.45029 5.61151 5.77443 6.13207 6.28632 6.33597 6.56601 6.96551 7.11962 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.063 4.063 3 Si 0.686 3.314 4 C -0.157 4.157 5 C -0.076 4.076 6 C -0.141 4.141 7 C 0.133 3.867 8 O -0.288 6.288 9 C 0.040 3.960 10 C 0.520 3.480 11 O -0.509 6.509 12 N -0.711 5.711 13 C 0.126 3.874 14 H 0.111 0.889 15 C -0.131 4.131 16 C -0.025 4.025 17 H 0.120 0.880 18 C 0.216 3.784 19 N -0.487 5.487 20 C -0.027 4.027 21 C -0.055 4.055 22 N -0.565 5.565 23 C -0.149 4.149 24 C -0.210 4.210 25 C -0.051 4.051 26 H 0.379 0.621 27 H 0.112 0.888 28 H -0.255 1.255 29 H -0.258 1.258 30 H 0.134 0.866 31 H 0.138 0.862 32 H 0.096 0.904 33 H 0.097 0.903 34 H 0.405 0.595 35 H 0.098 0.902 36 H 0.087 0.913 37 H 0.171 0.829 38 H 0.178 0.822 39 H 0.418 0.582 40 H 0.085 0.915 41 H 0.088 0.912 42 H 0.130 0.870 43 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.324 -0.538 -2.412 2.804 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.174 4.174 3 Si 0.589 3.411 4 C -0.158 4.158 5 C -0.094 4.094 6 C -0.159 4.159 7 C 0.088 3.912 8 O -0.201 6.201 9 C -0.038 4.038 10 C 0.305 3.695 11 O -0.382 6.382 12 N -0.365 5.365 13 C 0.020 3.980 14 H 0.129 0.871 15 C -0.170 4.170 16 C -0.045 4.045 17 H 0.138 0.862 18 C -0.048 4.048 19 N -0.206 5.206 20 C -0.175 4.175 21 C -0.189 4.189 22 N -0.169 5.169 23 C -0.189 4.189 24 C -0.228 4.228 25 C -0.069 4.069 26 H 0.226 0.774 27 H 0.130 0.870 28 H -0.180 1.180 29 H -0.183 1.183 30 H 0.151 0.849 31 H 0.156 0.844 32 H 0.114 0.886 33 H 0.114 0.886 34 H 0.240 0.760 35 H 0.117 0.883 36 H 0.105 0.895 37 H 0.189 0.811 38 H 0.196 0.804 39 H 0.256 0.744 40 H 0.103 0.897 41 H 0.106 0.894 42 H 0.148 0.852 43 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -0.370 -0.029 -1.348 1.398 hybrid contribution 0.029 -0.668 -0.674 0.949 sum -0.341 -0.697 -2.022 2.165 Atomic orbital electron populations 1.86494 1.17215 1.81687 1.49307 1.24967 0.85143 1.09936 0.97359 0.94738 0.81020 0.78141 0.87235 1.20257 1.01777 0.95575 0.98159 1.20845 0.96268 0.99232 0.93013 1.20407 1.04026 0.92146 0.99355 1.19065 0.93862 0.92337 0.85969 1.86156 1.70271 1.23597 1.40041 1.22455 1.01060 0.83175 0.97160 1.20047 0.80911 0.81964 0.86589 1.90792 1.37021 1.57050 1.53345 1.45473 1.54257 1.12116 1.24653 1.21779 0.97355 0.94816 0.84009 0.87108 1.23391 0.96205 0.94352 1.03070 1.21120 0.99070 0.89937 0.94369 0.86244 1.22916 1.03054 0.94886 0.83964 1.70242 1.19299 1.03775 1.27272 1.22421 1.05996 1.00830 0.88262 1.22837 1.09099 0.86802 1.00125 1.43266 1.50987 1.13974 1.08657 1.23571 1.00683 0.95697 0.98936 1.21295 1.03508 1.01027 0.97006 1.20797 0.96682 0.93465 0.95954 0.77360 0.87015 1.17990 1.18253 0.84884 0.84431 0.88580 0.88550 0.75976 0.88306 0.89476 0.81148 0.80438 0.74373 0.89673 0.89357 0.85201 0.85212 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.00 12.77 -35.23 -0.45 -0.45 16 2 C -0.06 0.02 2.82 36.01 0.10 0.13 16 3 Si 0.69 -0.74 29.78 -169.99 -5.06 -5.81 16 4 C -0.16 0.01 5.39 -104.60 -0.56 -0.56 16 5 C -0.08 0.02 8.66 -39.60 -0.34 -0.32 16 6 C -0.14 -0.11 9.99 -39.43 -0.39 -0.51 16 7 C 0.13 0.15 6.69 -39.21 -0.26 -0.11 16 8 O -0.29 -0.58 9.67 -39.31 -0.38 -0.96 16 9 C 0.04 -0.07 5.22 36.01 0.19 0.12 16 10 C 0.52 0.09 7.91 -10.98 -0.09 0.00 16 11 O -0.51 -2.59 16.12 -14.35 -0.23 -2.82 16 12 N -0.71 2.11 5.26 -53.02 -0.28 1.83 16 13 C 0.13 -0.31 4.29 -67.12 -0.29 -0.60 16 14 H 0.11 -0.09 7.50 -51.93 -0.39 -0.48 16 15 C -0.13 0.40 7.37 -25.92 -0.19 0.21 16 16 C -0.02 0.06 4.18 -90.82 -0.38 -0.32 16 17 H 0.12 -0.33 8.14 -51.93 -0.42 -0.76 16 18 C 0.22 0.13 7.36 -155.42 -1.14 -1.01 16 19 N -0.49 -1.67 11.25 -10.82 -0.12 -1.79 16 20 C -0.03 -0.05 11.87 -17.81 -0.21 -0.26 16 21 C -0.05 0.03 12.04 -16.56 -0.20 -0.17 16 22 N -0.57 0.65 5.94 -10.23 -0.06 0.59 16 23 C -0.15 0.46 7.37 -25.78 -0.19 0.27 16 24 C -0.21 0.08 9.04 -39.43 -0.36 -0.27 16 25 C -0.05 0.00 9.60 -39.61 -0.38 -0.38 16 26 H 0.38 -1.43 8.70 45.56 0.40 -1.03 16 27 H 0.11 0.00 7.96 -51.93 -0.41 -0.41 16 28 H -0.25 -0.57 7.11 56.52 0.40 -0.16 16 29 H -0.26 -0.32 7.11 56.52 0.40 0.08 16 30 H 0.13 -0.28 4.87 -52.49 -0.26 -0.54 16 31 H 0.14 0.01 8.06 -52.49 -0.42 -0.41 16 32 H 0.10 -0.40 7.66 -51.93 -0.40 -0.79 16 33 H 0.10 -0.41 7.66 -51.93 -0.40 -0.81 16 34 H 0.41 -2.37 8.70 -40.82 -0.36 -2.72 16 35 H 0.10 -0.27 8.09 -51.93 -0.42 -0.69 16 36 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 37 H 0.17 -0.02 8.06 -52.49 -0.42 -0.44 16 38 H 0.18 -0.61 8.06 -52.48 -0.42 -1.04 16 39 H 0.42 -1.63 7.53 -40.82 -0.31 -1.94 16 40 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 41 H 0.09 -0.36 6.65 -51.93 -0.35 -0.70 16 42 H 0.13 -0.38 6.30 -52.49 -0.33 -0.71 16 43 H 0.13 -0.10 8.06 -52.48 -0.42 -0.53 16 LS Contribution 363.10 15.07 5.47 5.47 Total: 0.00 -12.00 363.10 -11.19 -23.19 By element: Atomic # 1 Polarization: -10.07 SS G_CDS: -5.37 Total: -15.45 kcal Atomic # 6 Polarization: 0.90 SS G_CDS: -4.70 Total: -3.80 kcal Atomic # 7 Polarization: 1.09 SS G_CDS: -0.46 Total: 0.63 kcal Atomic # 8 Polarization: -3.17 SS G_CDS: -1.06 Total: -4.23 kcal Atomic # 14 Polarization: -0.74 SS G_CDS: -5.06 Total: -5.81 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -12.00 -11.19 -23.19 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16970406_2989410.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.719 kcal (2) G-P(sol) polarization free energy of solvation -11.997 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 31.723 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.190 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.186 kcal (6) G-S(sol) free energy of system = (1) + (5) 20.533 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds