Wall clock time and date at job start Tue Mar 9 2021 14:08:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86303 * 109.47318 * 2 1 4 4 C 1.50700 * 109.47306 * 239.99822 * 2 1 3 5 5 C 1.38247 * 119.96827 * 119.97957 * 4 2 1 6 6 C 1.38295 * 120.10668 * 180.02562 * 5 4 2 7 7 C 1.38125 * 120.05606 * 359.67887 * 6 5 4 8 8 C 1.38750 * 119.94134 * 0.59838 * 7 6 5 9 9 O 1.35907 * 120.05483 * 179.70193 * 8 7 6 10 10 C 1.42899 * 116.99903 * 359.72243 * 9 8 7 11 11 C 1.50697 * 109.47043 * 180.02562 * 10 9 8 12 12 O 1.21279 * 120.00099 * 359.97438 * 11 10 9 13 13 N 1.34771 * 119.99727 * 180.02562 * 11 10 9 14 14 C 1.46504 * 119.99958 * 179.97438 * 13 11 10 15 15 H 1.09000 * 112.84690 * 336.19882 * 14 13 11 16 16 C 1.53776 * 113.69020 * 107.46295 * 14 13 11 17 17 C 1.53777 * 87.08220 * 89.13221 * 16 14 13 18 18 H 1.09013 * 113.68907 * 270.87274 * 17 16 14 19 19 C 1.50698 * 113.61797 * 139.98180 * 17 16 14 20 20 N 1.30500 * 125.65161 * 167.47410 * 19 17 16 21 21 C 1.34127 * 109.25894 * 180.02562 * 20 19 17 22 22 C 1.34665 * 108.01668 * 0.26753 * 21 20 19 23 23 N 1.35045 * 125.65255 * 347.50447 * 19 17 16 24 24 C 1.53777 * 87.08115 * 25.43184 * 17 16 14 25 25 C 1.38164 * 119.97213 * 300.00403 * 4 2 1 26 26 H 0.96701 * 113.99896 * 59.99763 * 1 2 3 27 27 H 1.09007 * 109.46941 * 119.99681 * 2 1 3 28 28 H 1.48507 * 109.99970 * 59.99852 * 3 2 1 29 29 H 1.48498 * 110.00201 * 181.31591 * 3 2 1 30 30 H 1.07993 * 119.94736 * 0.02562 * 5 4 2 31 31 H 1.07997 * 119.96726 * 179.97438 * 6 5 4 32 32 H 1.07992 * 120.02779 * 180.32184 * 7 6 5 33 33 H 1.08999 * 109.47250 * 60.00125 * 10 9 8 34 34 H 1.09004 * 109.46827 * 300.00282 * 10 9 8 35 35 H 0.96999 * 120.00429 * 359.97438 * 13 11 10 36 36 H 1.09005 * 113.61551 * 334.58160 * 16 14 13 37 37 H 1.09007 * 113.61553 * 203.67882 * 16 14 13 38 38 H 1.08002 * 125.98809 * 179.97438 * 21 20 19 39 39 H 1.08002 * 126.58770 * 179.69323 * 22 21 20 40 40 H 0.97005 * 126.39044 * 0.02562 * 23 19 17 41 41 H 1.08994 * 113.61350 * 89.12035 * 24 17 16 42 42 H 1.08997 * 113.61376 * 220.02212 * 24 17 16 43 43 H 1.07998 * 120.02487 * 359.97438 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.7258 -0.0378 -2.1402 6 6 3.1879 -0.6869 -3.2706 7 6 2.8621 -2.0111 -3.4898 8 6 2.0602 -2.6866 -2.5811 9 8 1.7332 -3.9878 -2.7976 10 6 2.2450 -4.5964 -3.9849 11 6 1.7815 -6.0286 -4.0552 12 8 1.0821 -6.4835 -3.1750 13 7 2.1450 -6.8042 -5.0957 14 6 1.6949 -8.1967 -5.1638 15 1 1.4465 -8.6095 -4.1860 16 6 0.6149 -8.4455 -6.2298 17 6 1.7628 -8.7128 -7.2175 18 1 2.1165 -7.8183 -7.7305 19 6 1.4954 -9.8595 -8.1580 20 7 2.1887 -10.1447 -9.2262 21 6 1.6643 -11.2283 -9.8177 22 6 0.6023 -11.6263 -9.0916 23 7 0.4982 -10.7620 -8.0354 24 6 2.6160 -9.1019 -5.9987 25 6 1.5972 -2.0332 -1.4485 26 1 -0.3933 0.4417 -0.7650 27 1 1.7923 -0.5138 0.8901 28 1 1.5615 2.4679 1.2085 29 1 3.5346 1.7703 -0.0320 30 1 2.9859 0.9960 -1.9679 31 1 3.8080 -0.1591 -3.9800 32 1 3.2276 -2.5190 -4.3700 33 1 3.3345 -4.5672 -3.9676 34 1 1.8809 -4.0538 -4.8573 35 1 2.7047 -6.4405 -5.7995 36 1 0.0280 -7.5594 -6.4719 37 1 -0.0022 -9.3216 -6.0301 38 1 2.0271 -11.6964 -10.7208 39 1 -0.0422 -12.4672 -9.3012 40 1 -0.1700 -10.7894 -7.3327 41 1 2.5461 -10.1573 -5.7358 42 1 3.6446 -8.7456 -6.0542 43 1 0.9765 -2.5581 -0.7374 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16970406_4860298.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:08:52 Heat of formation + Delta-G solvation = 20.904951 kcal Electronic energy + Delta-G solvation = -26421.950548 eV Core-core repulsion = 22436.452188 eV Total energy + Delta-G solvation = -3985.498359 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.141 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -43.14182 -41.66877 -41.01379 -39.60368 -38.71108 -37.21909 -34.69717 -33.44338 -32.50383 -31.77663 -30.74721 -29.28082 -27.04428 -26.87452 -26.14330 -23.70679 -23.08685 -22.49352 -21.82918 -21.69088 -20.62262 -19.44301 -19.10468 -18.47035 -17.70204 -17.53361 -17.34789 -17.10807 -16.78122 -16.24325 -16.14788 -15.78238 -15.67930 -15.39674 -15.29249 -15.00826 -14.76191 -14.59580 -14.53173 -14.18045 -14.00525 -13.86534 -13.68370 -13.40073 -12.98812 -12.67125 -12.60128 -12.22318 -12.04937 -11.95807 -11.70547 -11.68260 -11.01225 -11.00170 -10.98760 -10.50823 -10.33532 -9.94653 -9.37357 -9.30581 -5.04072 0.16598 0.36659 1.04243 1.22797 1.36054 1.36646 1.62842 1.96415 2.07766 2.15366 2.45259 2.63661 3.10869 3.21662 3.31971 3.43323 3.46677 3.58236 3.60761 3.70154 3.83152 3.84387 3.89003 3.97654 4.08189 4.15394 4.33345 4.35475 4.38636 4.44961 4.51319 4.53830 4.57428 4.61010 4.67969 4.77597 4.85808 4.93626 5.11001 5.19443 5.29449 5.31595 5.40455 5.60800 5.77578 6.14541 6.30757 6.33723 6.57106 6.97737 7.12081 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.071 4.071 3 Si 0.694 3.306 4 C -0.080 4.080 5 C -0.154 4.154 6 C -0.072 4.072 7 C -0.206 4.206 8 C 0.129 3.871 9 O -0.288 6.288 10 C 0.041 3.959 11 C 0.520 3.480 12 O -0.508 6.508 13 N -0.711 5.711 14 C 0.125 3.875 15 H 0.112 0.888 16 C -0.150 4.150 17 C -0.025 4.025 18 H 0.120 0.880 19 C 0.216 3.784 20 N -0.487 5.487 21 C -0.027 4.027 22 C -0.055 4.055 23 N -0.565 5.565 24 C -0.131 4.131 25 C -0.120 4.120 26 H 0.380 0.620 27 H 0.116 0.884 28 H -0.255 1.255 29 H -0.258 1.258 30 H 0.129 0.871 31 H 0.132 0.868 32 H 0.130 0.870 33 H 0.096 0.904 34 H 0.096 0.904 35 H 0.405 0.595 36 H 0.084 0.916 37 H 0.088 0.912 38 H 0.171 0.829 39 H 0.178 0.822 40 H 0.418 0.582 41 H 0.098 0.902 42 H 0.087 0.913 43 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.538 1.239 -4.626 4.820 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.181 4.181 3 Si 0.596 3.404 4 C -0.080 4.080 5 C -0.172 4.172 6 C -0.090 4.090 7 C -0.225 4.225 8 C 0.083 3.917 9 O -0.201 6.201 10 C -0.038 4.038 11 C 0.305 3.695 12 O -0.381 6.381 13 N -0.365 5.365 14 C 0.020 3.980 15 H 0.130 0.870 16 C -0.189 4.189 17 C -0.045 4.045 18 H 0.138 0.862 19 C -0.048 4.048 20 N -0.206 5.206 21 C -0.175 4.175 22 C -0.189 4.189 23 N -0.169 5.169 24 C -0.170 4.170 25 C -0.139 4.139 26 H 0.227 0.773 27 H 0.133 0.867 28 H -0.180 1.180 29 H -0.183 1.183 30 H 0.147 0.853 31 H 0.149 0.851 32 H 0.148 0.852 33 H 0.114 0.886 34 H 0.114 0.886 35 H 0.240 0.760 36 H 0.103 0.897 37 H 0.107 0.893 38 H 0.189 0.811 39 H 0.196 0.804 40 H 0.256 0.744 41 H 0.117 0.883 42 H 0.105 0.895 43 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 1.182 1.478 -3.189 3.708 hybrid contribution -0.516 -1.148 -0.103 1.263 sum 0.666 0.329 -3.292 3.375 Atomic orbital electron populations 1.86523 1.16872 1.81706 1.49219 1.25134 0.85433 1.10260 0.97318 0.94639 0.80895 0.77742 0.87131 1.20165 0.97415 0.93819 0.96624 1.20955 1.00832 0.99905 0.95489 1.20914 0.97790 0.93643 0.96694 1.21297 1.03518 0.96631 1.01039 1.19037 0.94864 0.82948 0.94803 1.86171 1.70423 1.22602 1.40888 1.22450 1.00355 0.92010 0.89006 1.20052 0.80564 0.87035 0.81897 1.90796 1.35734 1.74017 1.37602 1.45462 1.54194 1.11697 1.25131 1.21780 0.94931 0.81184 1.00105 0.87045 1.23525 0.96793 1.03026 0.95554 1.21076 0.97902 0.94163 0.91356 0.86241 1.22920 0.89380 0.95258 0.97268 1.70238 1.28079 1.15570 1.06703 1.22420 0.96355 0.96504 1.02239 1.22834 1.04214 0.99853 0.91957 1.43268 1.26387 1.24078 1.23154 1.23401 0.99497 1.00733 0.93418 1.20268 1.02799 0.93912 0.96933 0.77309 0.86667 1.17955 1.18273 0.85337 0.85052 0.85201 0.88597 0.88571 0.75993 0.89681 0.89348 0.81146 0.80441 0.74369 0.88318 0.89486 0.84596 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.40 12.77 -35.23 -0.45 -0.85 16 2 C -0.07 -0.01 2.82 36.01 0.10 0.09 16 3 Si 0.69 -0.75 29.79 -169.99 -5.06 -5.81 16 4 C -0.08 -0.05 5.39 -104.65 -0.56 -0.61 16 5 C -0.15 0.10 8.67 -39.56 -0.34 -0.24 16 6 C -0.07 0.08 10.04 -39.60 -0.40 -0.31 16 7 C -0.21 0.14 9.04 -39.43 -0.36 -0.21 16 8 C 0.13 0.21 6.69 -39.22 -0.26 -0.06 16 9 O -0.29 -0.74 9.67 -39.36 -0.38 -1.12 16 10 C 0.04 -0.06 5.22 36.00 0.19 0.12 16 11 C 0.52 0.22 7.91 -10.99 -0.09 0.14 16 12 O -0.51 -2.80 16.10 -14.35 -0.23 -3.03 16 13 N -0.71 2.01 5.27 -53.02 -0.28 1.73 16 14 C 0.13 -0.29 4.32 -67.12 -0.29 -0.58 16 15 H 0.11 -0.06 7.46 -51.93 -0.39 -0.45 16 16 C -0.15 0.44 7.36 -25.92 -0.19 0.25 16 17 C -0.02 0.06 4.17 -90.96 -0.38 -0.32 16 18 H 0.12 -0.34 8.14 -51.92 -0.42 -0.76 16 19 C 0.22 0.14 7.36 -155.41 -1.14 -1.01 16 20 N -0.49 -1.68 11.25 -10.82 -0.12 -1.80 16 21 C -0.03 -0.05 11.87 -17.81 -0.21 -0.26 16 22 C -0.05 0.02 12.04 -16.57 -0.20 -0.18 16 23 N -0.57 0.62 5.94 -10.23 -0.06 0.56 16 24 C -0.13 0.38 7.38 -25.92 -0.19 0.19 16 25 C -0.12 -0.25 9.55 -39.43 -0.38 -0.63 16 26 H 0.38 -1.23 8.70 45.56 0.40 -0.83 16 27 H 0.12 0.08 7.96 -51.92 -0.41 -0.34 16 28 H -0.25 -0.56 7.11 56.52 0.40 -0.16 16 29 H -0.26 -0.29 7.11 56.52 0.40 0.12 16 30 H 0.13 -0.32 4.87 -52.49 -0.26 -0.57 16 31 H 0.13 -0.45 8.06 -52.49 -0.42 -0.88 16 32 H 0.13 -0.44 6.30 -52.49 -0.33 -0.77 16 33 H 0.10 -0.39 7.65 -51.93 -0.40 -0.79 16 34 H 0.10 -0.41 7.67 -51.93 -0.40 -0.80 16 35 H 0.41 -2.35 8.70 -40.82 -0.36 -2.71 16 36 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 37 H 0.09 -0.35 6.64 -51.93 -0.34 -0.69 16 38 H 0.17 -0.02 8.06 -52.49 -0.42 -0.44 16 39 H 0.18 -0.61 8.06 -52.49 -0.42 -1.03 16 40 H 0.42 -1.60 7.53 -40.82 -0.31 -1.90 16 41 H 0.10 -0.26 8.09 -51.93 -0.42 -0.68 16 42 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 43 H 0.14 0.39 8.06 -52.49 -0.42 -0.04 16 LS Contribution 363.05 15.07 5.47 5.47 Total: 0.00 -12.34 363.05 -11.19 -23.53 By element: Atomic # 1 Polarization: -9.70 SS G_CDS: -5.37 Total: -15.07 kcal Atomic # 6 Polarization: 1.09 SS G_CDS: -4.70 Total: -3.61 kcal Atomic # 7 Polarization: 0.96 SS G_CDS: -0.46 Total: 0.49 kcal Atomic # 8 Polarization: -3.93 SS G_CDS: -1.06 Total: -4.99 kcal Atomic # 14 Polarization: -0.75 SS G_CDS: -5.06 Total: -5.81 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -12.34 -11.19 -23.53 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16970406_4860298.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.435 kcal (2) G-P(sol) polarization free energy of solvation -12.340 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 32.095 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.190 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.530 kcal (6) G-S(sol) free energy of system = (1) + (5) 20.905 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds