Wall clock time and date at job start Tue Mar 9 2021 14:09:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35991 * 117.00364 * 2 1 4 4 C 1.39151 * 120.07619 * 179.72796 * 3 2 1 5 5 O 1.36002 * 120.06937 * 0.02562 * 4 3 2 6 6 C 1.42902 * 116.99631 * 180.02562 * 5 4 3 7 7 C 1.50699 * 109.47100 * 179.97438 * 6 5 4 8 8 O 1.21287 * 119.99560 * 359.97438 * 7 6 5 9 9 N 1.34770 * 120.00220 * 179.97438 * 7 6 5 10 10 C 1.46495 * 120.00087 * 180.02562 * 9 7 6 11 11 H 1.09003 * 112.85377 * 25.33286 * 10 9 7 12 12 C 1.53779 * 113.61634 * 156.52730 * 10 9 7 13 13 C 1.53786 * 87.08238 * 89.11813 * 12 10 9 14 14 H 1.09001 * 113.61246 * 270.80465 * 13 12 10 15 15 C 1.50697 * 113.61486 * 139.98235 * 13 12 10 16 16 N 1.30501 * 125.64773 * 94.69630 * 15 13 12 17 17 C 1.34135 * 109.25324 * 179.88974 * 16 15 13 18 18 C 1.34663 * 108.01897 * 0.36404 * 17 16 15 19 19 N 1.35044 * 125.64985 * 274.99372 * 15 13 12 20 20 C 1.53777 * 113.61681 * 254.13451 * 10 9 7 21 21 C 1.38559 * 119.85592 * 179.72039 * 4 3 2 22 22 C 1.38247 * 119.99995 * 0.55606 * 21 4 3 23 23 C 1.38254 * 120.14265 * 359.71512 * 22 21 4 24 24 C 1.50700 * 119.92546 * 179.97438 * 23 22 21 25 25 O 1.42902 * 109.47168 * 245.02569 * 24 23 22 26 26 Si 1.86302 * 109.47174 * 5.02467 * 24 23 22 27 27 C 1.38239 * 120.14652 * 0.02562 * 23 22 21 28 28 H 1.09002 * 109.47382 * 179.97438 * 1 2 3 29 29 H 1.09001 * 109.46938 * 59.99845 * 1 2 3 30 30 H 1.09004 * 109.46926 * 299.99967 * 1 2 3 31 31 H 1.09001 * 109.46853 * 299.99631 * 6 5 4 32 32 H 1.08996 * 109.47505 * 59.99406 * 6 5 4 33 33 H 0.97002 * 119.99726 * 359.97438 * 9 7 6 34 34 H 1.09007 * 113.61815 * 203.66417 * 12 10 9 35 35 H 1.09003 * 113.61445 * 334.56849 * 12 10 9 36 36 H 1.07993 * 125.98371 * 180.11641 * 17 16 15 37 37 H 1.08003 * 126.58997 * 179.74110 * 18 17 16 38 38 H 0.96998 * 126.39805 * 359.97438 * 19 15 13 39 39 H 1.09005 * 113.61330 * 25.43165 * 20 10 9 40 40 H 1.09002 * 113.62046 * 156.33276 * 20 10 9 41 41 H 1.08001 * 120.00429 * 180.27535 * 21 4 3 42 42 H 1.07995 * 119.93007 * 179.74252 * 22 21 4 43 43 H 1.08997 * 109.47326 * 125.02843 * 24 23 22 44 44 H 0.96705 * 114.00161 * 180.02562 * 25 24 23 45 45 H 1.48504 * 109.99895 * 299.99817 * 26 24 23 46 46 H 1.48497 * 109.99938 * 61.32065 * 26 24 23 47 47 H 1.08005 * 120.00155 * 179.97438 * 27 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2117 0.0000 4 6 3.4360 1.2862 0.0057 5 8 4.1795 0.1475 0.0108 6 6 5.6003 0.3005 0.0171 7 6 6.2518 -1.0584 0.0227 8 8 5.5668 -2.0593 0.0219 9 7 7.5956 -1.1614 0.0286 10 6 8.2289 -2.4824 0.0335 11 1 7.5951 -3.2573 -0.3977 12 6 9.6630 -2.4801 -0.5217 13 6 10.1341 -2.1901 0.9133 14 1 10.1850 -1.1273 1.1497 15 6 11.3847 -2.9365 1.3005 16 7 12.6023 -2.4741 1.2192 17 6 13.4606 -3.4100 1.6509 18 6 12.7484 -4.4964 2.0060 19 7 11.4314 -4.1966 1.7839 20 6 8.8368 -2.8691 1.3920 21 6 4.0604 2.5232 -0.0002 22 6 3.3031 3.6798 -0.0001 23 6 1.9225 3.6057 -0.0001 24 6 1.1018 4.8696 0.0006 25 8 0.3654 4.9587 1.2220 26 14 2.2311 6.3434 -0.1525 27 6 1.2934 2.3748 0.0004 28 1 -0.3634 -1.0277 -0.0005 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 0.5139 0.8900 31 1 5.9106 0.8489 -0.8724 32 1 5.9025 0.8516 0.9075 33 1 8.1434 -0.3609 0.0288 34 1 9.9865 -3.4500 -0.8998 35 1 9.8600 -1.6657 -1.2189 36 1 14.5349 -3.3112 1.7009 37 1 13.1410 -5.4259 2.3912 38 1 10.6734 -4.7802 1.9438 39 1 8.3672 -2.3686 2.2389 40 1 8.9348 -3.9451 1.5363 41 1 5.1387 2.5838 -0.0002 42 1 3.7910 4.6432 -0.0005 43 1 0.4092 4.8535 -0.8409 44 1 -0.1870 5.7494 1.2915 45 1 3.1803 6.3767 0.9891 46 1 2.9793 6.2790 -1.4336 47 1 0.2147 2.3196 0.0008 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16970406_60476.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:09:06 Heat of formation + Delta-G solvation = -8.059381 kcal Electronic energy + Delta-G solvation = -30893.341948 eV Core-core repulsion = 26432.367790 eV Total energy + Delta-G solvation = -4460.974158 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.156 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -43.12068 -41.82249 -41.19659 -39.80093 -38.94506 -38.64882 -37.02832 -34.64251 -33.42613 -32.17554 -31.51228 -30.80471 -29.48538 -28.44061 -27.01788 -26.37724 -25.98333 -23.72069 -22.72360 -22.42126 -21.85082 -21.76495 -20.60342 -19.76389 -19.11279 -18.54153 -18.31012 -18.17393 -17.55600 -17.47964 -17.11853 -16.58269 -16.32387 -16.19741 -15.86861 -15.74073 -15.61404 -15.53821 -15.27879 -15.14918 -14.63381 -14.57269 -14.31454 -14.15161 -14.05820 -13.81337 -13.65917 -13.52123 -13.41203 -12.80259 -12.65061 -12.37125 -12.26090 -12.20261 -12.03236 -12.00656 -11.82709 -11.67004 -10.99072 -10.97083 -10.95037 -10.37470 -10.28792 -9.79430 -9.35730 -8.86778 -5.00904 0.16090 0.26654 1.05933 1.23530 1.35327 1.42594 1.60371 1.92792 2.09352 2.17106 2.30098 2.46269 2.52518 3.12813 3.24433 3.32172 3.37691 3.47280 3.60457 3.67665 3.72250 3.81581 3.88166 3.89771 3.91948 4.09886 4.13646 4.21173 4.27277 4.29034 4.37740 4.41139 4.42142 4.46574 4.54135 4.56603 4.63810 4.64305 4.70875 4.79954 4.88597 4.96096 5.05492 5.12807 5.33218 5.36049 5.51989 5.79130 5.93530 6.24901 6.35422 6.52237 6.57681 7.03631 7.13707 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.301 6.301 3 C 0.109 3.891 4 C 0.104 3.896 5 O -0.276 6.276 6 C 0.038 3.962 7 C 0.520 3.480 8 O -0.505 6.505 9 N -0.712 5.712 10 C 0.126 3.874 11 H 0.111 0.889 12 C -0.131 4.131 13 C -0.025 4.025 14 H 0.119 0.881 15 C 0.216 3.784 16 N -0.487 5.487 17 C -0.027 4.027 18 C -0.055 4.055 19 N -0.565 5.565 20 C -0.150 4.150 21 C -0.167 4.167 22 C -0.120 4.120 23 C -0.070 4.070 24 C -0.070 4.070 25 O -0.546 6.546 26 Si 0.684 3.316 27 C -0.143 4.143 28 H 0.104 0.896 29 H 0.056 0.944 30 H 0.057 0.943 31 H 0.096 0.904 32 H 0.095 0.905 33 H 0.405 0.595 34 H 0.098 0.902 35 H 0.086 0.914 36 H 0.171 0.829 37 H 0.178 0.822 38 H 0.418 0.582 39 H 0.084 0.916 40 H 0.088 0.912 41 H 0.140 0.860 42 H 0.124 0.876 43 H 0.074 0.926 44 H 0.382 0.618 45 H -0.250 1.250 46 H -0.254 1.254 47 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.230 3.446 -0.525 3.696 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.214 6.214 3 C 0.063 3.937 4 C 0.058 3.942 5 O -0.188 6.188 6 C -0.041 4.041 7 C 0.305 3.695 8 O -0.378 6.378 9 N -0.366 5.366 10 C 0.021 3.979 11 H 0.129 0.871 12 C -0.170 4.170 13 C -0.045 4.045 14 H 0.137 0.863 15 C -0.048 4.048 16 N -0.206 5.206 17 C -0.175 4.175 18 C -0.189 4.189 19 N -0.169 5.169 20 C -0.189 4.189 21 C -0.186 4.186 22 C -0.138 4.138 23 C -0.070 4.070 24 C -0.180 4.180 25 O -0.352 6.352 26 Si 0.585 3.415 27 C -0.162 4.162 28 H 0.122 0.878 29 H 0.074 0.926 30 H 0.076 0.924 31 H 0.113 0.887 32 H 0.113 0.887 33 H 0.240 0.760 34 H 0.117 0.883 35 H 0.105 0.895 36 H 0.188 0.812 37 H 0.196 0.804 38 H 0.256 0.744 39 H 0.103 0.897 40 H 0.106 0.894 41 H 0.157 0.843 42 H 0.141 0.859 43 H 0.092 0.908 44 H 0.230 0.770 45 H -0.175 1.175 46 H -0.179 1.179 47 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -0.327 2.802 -0.780 2.927 hybrid contribution -0.193 -1.033 0.414 1.130 sum -0.521 1.769 -0.366 1.880 Atomic orbital electron populations 1.23144 0.78081 1.04445 1.01401 1.86246 1.21387 1.25208 1.88538 1.18242 0.88956 0.85550 1.00924 1.18222 0.88320 0.85623 1.01993 1.86273 1.15966 1.27642 1.88929 1.22473 0.81381 0.96140 1.04127 1.20015 0.82290 0.90601 0.76597 1.90803 1.62532 1.37987 1.46496 1.45464 1.05888 1.08866 1.76368 1.21768 0.93924 0.85766 0.96462 0.87111 1.23394 0.93505 1.04180 0.95912 1.21127 0.86848 0.99664 0.96889 0.86256 1.22923 0.95456 0.84005 1.02383 1.70243 0.98816 1.30971 1.20593 1.22419 0.99948 0.90505 1.04656 1.22833 0.83096 1.02755 1.10199 1.43269 1.08879 1.14417 1.50318 1.23572 0.95185 1.01187 0.98964 1.20935 1.00400 0.90617 1.06657 1.20569 0.93023 0.97636 1.02544 1.19031 0.92739 0.93481 1.01761 1.24661 1.00793 1.02759 0.89804 1.86501 1.63257 1.48496 1.36943 0.95312 0.81218 0.84399 0.80529 1.20921 1.00424 0.90258 1.04557 0.87807 0.92555 0.92401 0.88657 0.88688 0.76033 0.88311 0.89488 0.81151 0.80443 0.74365 0.89688 0.89367 0.84280 0.85867 0.90776 0.77000 1.17474 1.17896 0.84008 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 101.05 0.99 1.01 16 2 O -0.30 -1.47 10.28 -34.22 -0.35 -1.82 16 3 C 0.11 0.48 6.70 -39.12 -0.26 0.22 16 4 C 0.10 0.40 6.70 -39.12 -0.26 0.14 16 5 O -0.28 -1.24 9.46 -47.37 -0.45 -1.69 16 6 C 0.04 -0.01 5.22 36.01 0.19 0.18 16 7 C 0.52 0.79 7.91 -10.99 -0.09 0.70 16 8 O -0.51 -3.33 16.12 -14.36 -0.23 -3.56 16 9 N -0.71 1.41 5.26 -53.02 -0.28 1.13 16 10 C 0.13 -0.21 4.29 -67.12 -0.29 -0.50 16 11 H 0.11 0.00 7.50 -51.93 -0.39 -0.39 16 12 C -0.13 0.32 7.37 -25.92 -0.19 0.13 16 13 C -0.03 0.04 4.18 -90.82 -0.38 -0.34 16 14 H 0.12 -0.26 8.14 -51.93 -0.42 -0.68 16 15 C 0.22 0.24 7.36 -155.41 -1.14 -0.90 16 16 N -0.49 -1.89 11.25 -10.82 -0.12 -2.01 16 17 C -0.03 -0.06 11.87 -17.81 -0.21 -0.27 16 18 C -0.06 0.00 12.04 -16.56 -0.20 -0.20 16 19 N -0.57 0.38 5.94 -10.23 -0.06 0.32 16 20 C -0.15 0.34 7.37 -25.78 -0.19 0.15 16 21 C -0.17 -0.27 9.04 -39.46 -0.36 -0.63 16 22 C -0.12 -0.27 8.66 -39.57 -0.34 -0.61 16 23 C -0.07 -0.17 5.38 -104.62 -0.56 -0.74 16 24 C -0.07 0.01 2.79 36.01 0.10 0.11 16 25 O -0.55 -0.02 12.81 -35.23 -0.45 -0.47 16 26 Si 0.68 -0.94 29.84 -169.99 -5.07 -6.02 16 27 C -0.14 -0.40 8.67 -39.46 -0.34 -0.74 16 28 H 0.10 -0.09 8.14 -51.93 -0.42 -0.52 16 29 H 0.06 -0.04 7.66 -51.93 -0.40 -0.44 16 30 H 0.06 -0.02 7.66 -51.93 -0.40 -0.42 16 31 H 0.10 -0.28 7.65 -51.93 -0.40 -0.68 16 32 H 0.10 -0.27 7.68 -51.93 -0.40 -0.67 16 33 H 0.40 -2.01 8.70 -40.82 -0.36 -2.37 16 34 H 0.10 -0.22 8.09 -51.92 -0.42 -0.64 16 35 H 0.09 -0.25 8.14 -51.93 -0.42 -0.67 16 36 H 0.17 0.04 8.06 -52.49 -0.42 -0.39 16 37 H 0.18 -0.55 8.06 -52.48 -0.42 -0.97 16 38 H 0.42 -1.41 7.53 -40.82 -0.31 -1.72 16 39 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 40 H 0.09 -0.29 6.65 -51.93 -0.35 -0.64 16 41 H 0.14 -0.23 6.30 -52.49 -0.33 -0.56 16 42 H 0.12 0.15 4.85 -52.49 -0.25 -0.11 16 43 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 44 H 0.38 -1.94 8.74 45.56 0.40 -1.54 16 45 H -0.25 -0.41 7.05 56.52 0.40 -0.01 16 46 H -0.25 -0.25 7.11 56.52 0.40 0.16 16 47 H 0.14 0.15 6.30 -52.48 -0.33 -0.18 16 LS Contribution 392.46 15.07 5.91 5.91 Total: 0.00 -14.30 392.46 -10.72 -25.02 By element: Atomic # 1 Polarization: -8.45 SS G_CDS: -6.08 Total: -14.53 kcal Atomic # 6 Polarization: 1.25 SS G_CDS: -3.54 Total: -2.29 kcal Atomic # 7 Polarization: -0.10 SS G_CDS: -0.46 Total: -0.56 kcal Atomic # 8 Polarization: -6.06 SS G_CDS: -1.48 Total: -7.54 kcal Atomic # 14 Polarization: -0.94 SS G_CDS: -5.07 Total: -6.02 kcal Total LS contribution 5.91 Total: 5.91 kcal Total: -14.30 -10.72 -25.02 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16970406_60476.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.959 kcal (2) G-P(sol) polarization free energy of solvation -14.298 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 2.661 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.721 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.019 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.059 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds