Wall clock time and date at job start Tue Mar 9 2021 14:09:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35991 * 117.00364 * 2 1 4 4 C 1.39151 * 120.07619 * 179.72796 * 3 2 1 5 5 O 1.36002 * 120.06937 * 0.02562 * 4 3 2 6 6 C 1.42902 * 116.99631 * 180.02562 * 5 4 3 7 7 C 1.50699 * 109.47100 * 179.97438 * 6 5 4 8 8 O 1.21287 * 119.99560 * 359.97438 * 7 6 5 9 9 N 1.34770 * 120.00220 * 179.97438 * 7 6 5 10 10 C 1.46495 * 120.00087 * 180.02562 * 9 7 6 11 11 H 1.09003 * 112.85377 * 25.33286 * 10 9 7 12 12 C 1.53779 * 113.61634 * 156.52730 * 10 9 7 13 13 C 1.53786 * 87.08238 * 89.11813 * 12 10 9 14 14 H 1.09001 * 113.61246 * 270.80465 * 13 12 10 15 15 C 1.50697 * 113.61486 * 139.98235 * 13 12 10 16 16 N 1.30501 * 125.64773 * 94.69630 * 15 13 12 17 17 C 1.34135 * 109.25324 * 179.88974 * 16 15 13 18 18 C 1.34663 * 108.01897 * 0.36404 * 17 16 15 19 19 N 1.35044 * 125.64985 * 274.99372 * 15 13 12 20 20 C 1.53777 * 113.61681 * 254.13451 * 10 9 7 21 21 C 1.38559 * 119.85592 * 179.72039 * 4 3 2 22 22 C 1.38247 * 119.99995 * 0.55606 * 21 4 3 23 23 C 1.38254 * 120.14265 * 359.71512 * 22 21 4 24 24 C 1.50700 * 119.92546 * 179.97438 * 23 22 21 25 25 O 1.42902 * 109.47168 * 245.02569 * 24 23 22 26 26 Si 1.86302 * 109.47174 * 5.02467 * 24 23 22 27 27 C 1.38239 * 120.14652 * 0.02562 * 23 22 21 28 28 H 1.09002 * 109.47382 * 179.97438 * 1 2 3 29 29 H 1.09001 * 109.46938 * 59.99845 * 1 2 3 30 30 H 1.09004 * 109.46926 * 299.99967 * 1 2 3 31 31 H 1.09001 * 109.46853 * 299.99631 * 6 5 4 32 32 H 1.08996 * 109.47505 * 59.99406 * 6 5 4 33 33 H 0.97002 * 119.99726 * 359.97438 * 9 7 6 34 34 H 1.09007 * 113.61815 * 203.66417 * 12 10 9 35 35 H 1.09003 * 113.61445 * 334.56849 * 12 10 9 36 36 H 1.07993 * 125.98371 * 180.11641 * 17 16 15 37 37 H 1.08003 * 126.58997 * 179.74110 * 18 17 16 38 38 H 0.96998 * 126.39805 * 359.97438 * 19 15 13 39 39 H 1.09005 * 113.61330 * 25.43165 * 20 10 9 40 40 H 1.09002 * 113.62046 * 156.33276 * 20 10 9 41 41 H 1.08001 * 120.00429 * 180.27535 * 21 4 3 42 42 H 1.07995 * 119.93007 * 179.74252 * 22 21 4 43 43 H 1.08997 * 109.47326 * 125.02843 * 24 23 22 44 44 H 0.96705 * 114.00161 * 180.02562 * 25 24 23 45 45 H 1.48504 * 109.99895 * 299.99817 * 26 24 23 46 46 H 1.48497 * 109.99938 * 61.32065 * 26 24 23 47 47 H 1.08005 * 120.00155 * 179.97438 * 27 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2117 0.0000 4 6 3.4360 1.2862 0.0057 5 8 4.1795 0.1475 0.0108 6 6 5.6003 0.3005 0.0171 7 6 6.2518 -1.0584 0.0227 8 8 5.5668 -2.0593 0.0219 9 7 7.5956 -1.1614 0.0286 10 6 8.2289 -2.4824 0.0335 11 1 7.5951 -3.2573 -0.3977 12 6 9.6630 -2.4801 -0.5217 13 6 10.1341 -2.1901 0.9133 14 1 10.1850 -1.1273 1.1497 15 6 11.3847 -2.9365 1.3005 16 7 12.6023 -2.4741 1.2192 17 6 13.4606 -3.4100 1.6509 18 6 12.7484 -4.4964 2.0060 19 7 11.4314 -4.1966 1.7839 20 6 8.8368 -2.8691 1.3920 21 6 4.0604 2.5232 -0.0002 22 6 3.3031 3.6798 -0.0001 23 6 1.9225 3.6057 -0.0001 24 6 1.1018 4.8696 0.0006 25 8 0.3654 4.9587 1.2220 26 14 2.2311 6.3434 -0.1525 27 6 1.2934 2.3748 0.0004 28 1 -0.3634 -1.0277 -0.0005 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 0.5139 0.8900 31 1 5.9106 0.8489 -0.8724 32 1 5.9025 0.8516 0.9075 33 1 8.1434 -0.3609 0.0288 34 1 9.9865 -3.4500 -0.8998 35 1 9.8600 -1.6657 -1.2189 36 1 14.5349 -3.3112 1.7009 37 1 13.1410 -5.4259 2.3912 38 1 10.6734 -4.7802 1.9438 39 1 8.3672 -2.3686 2.2389 40 1 8.9348 -3.9451 1.5363 41 1 5.1387 2.5838 -0.0002 42 1 3.7910 4.6432 -0.0005 43 1 0.4092 4.8535 -0.8409 44 1 -0.1870 5.7494 1.2915 45 1 3.1803 6.3767 0.9891 46 1 2.9793 6.2790 -1.4336 47 1 0.2147 2.3196 0.0008 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16970406_60476.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:09:05 Heat of formation + Delta-G solvation = -13.629181 kcal Electronic energy + Delta-G solvation = -30893.583473 eV Core-core repulsion = 26432.367790 eV Total energy + Delta-G solvation = -4461.215683 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.156 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -43.12025 -41.93524 -41.23880 -39.85850 -39.06249 -38.71784 -37.03796 -34.68880 -33.46235 -32.24528 -31.62461 -30.81635 -29.49549 -28.49604 -26.86357 -26.37510 -25.96564 -23.80881 -22.76244 -22.48605 -21.88765 -21.78278 -20.55041 -19.85752 -19.06861 -18.54283 -18.37030 -18.22166 -17.62578 -17.56056 -17.07042 -16.70065 -16.37802 -16.20902 -15.92371 -15.73473 -15.65491 -15.52236 -15.35301 -15.15008 -14.60575 -14.57606 -14.36589 -14.21473 -14.07783 -13.74747 -13.60621 -13.54788 -13.41491 -12.82453 -12.56984 -12.42848 -12.32000 -12.25002 -12.09677 -11.94134 -11.84479 -11.55303 -11.10702 -11.06721 -11.03436 -10.30674 -10.26919 -9.90727 -9.37060 -9.03492 -4.90184 0.03956 0.10786 1.07164 1.32216 1.35367 1.35725 1.68581 1.98983 2.09816 2.18689 2.21714 2.39808 2.46456 3.24415 3.34098 3.36192 3.42797 3.55067 3.65480 3.71122 3.74205 3.85195 3.92584 4.01789 4.06037 4.10788 4.15690 4.21942 4.26851 4.29615 4.46572 4.48595 4.50837 4.52046 4.57488 4.62484 4.64491 4.74513 4.83724 4.85358 4.92248 4.93282 4.99786 5.12479 5.23181 5.40441 5.44211 5.77138 5.85891 6.31697 6.43145 6.45910 6.91572 7.04681 7.10762 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.331 6.331 3 C 0.085 3.915 4 C 0.086 3.914 5 O -0.309 6.309 6 C 0.031 3.969 7 C 0.519 3.481 8 O -0.566 6.566 9 N -0.692 5.692 10 C 0.123 3.877 11 H 0.093 0.907 12 C -0.119 4.119 13 C -0.022 4.022 14 H 0.126 0.874 15 C 0.208 3.792 16 N -0.530 5.530 17 C -0.063 4.063 18 C -0.045 4.045 19 N -0.559 5.559 20 C -0.142 4.142 21 C -0.160 4.160 22 C -0.134 4.134 23 C -0.085 4.085 24 C -0.080 4.080 25 O -0.565 6.565 26 Si 0.777 3.223 27 C -0.148 4.148 28 H 0.114 0.886 29 H 0.068 0.932 30 H 0.064 0.936 31 H 0.126 0.874 32 H 0.125 0.875 33 H 0.422 0.578 34 H 0.098 0.902 35 H 0.095 0.905 36 H 0.178 0.822 37 H 0.208 0.792 38 H 0.431 0.569 39 H 0.081 0.919 40 H 0.099 0.901 41 H 0.172 0.828 42 H 0.131 0.869 43 H 0.093 0.907 44 H 0.404 0.596 45 H -0.292 1.292 46 H -0.285 1.285 47 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.096 4.480 -0.486 4.637 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.245 6.245 3 C 0.039 3.961 4 C 0.040 3.960 5 O -0.222 6.222 6 C -0.046 4.046 7 C 0.306 3.694 8 O -0.444 6.444 9 N -0.347 5.347 10 C 0.017 3.983 11 H 0.111 0.889 12 C -0.158 4.158 13 C -0.042 4.042 14 H 0.144 0.856 15 C -0.056 4.056 16 N -0.250 5.250 17 C -0.210 4.210 18 C -0.180 4.180 19 N -0.163 5.163 20 C -0.181 4.181 21 C -0.179 4.179 22 C -0.151 4.151 23 C -0.086 4.086 24 C -0.190 4.190 25 O -0.375 6.375 26 Si 0.682 3.318 27 C -0.166 4.166 28 H 0.132 0.868 29 H 0.087 0.913 30 H 0.083 0.917 31 H 0.144 0.856 32 H 0.142 0.858 33 H 0.260 0.740 34 H 0.116 0.884 35 H 0.113 0.887 36 H 0.195 0.805 37 H 0.225 0.775 38 H 0.272 0.728 39 H 0.100 0.900 40 H 0.117 0.883 41 H 0.189 0.811 42 H 0.149 0.851 43 H 0.111 0.889 44 H 0.255 0.745 45 H -0.220 1.220 46 H -0.212 1.212 47 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges -0.198 3.867 -0.737 3.942 hybrid contribution -0.181 -1.372 0.425 1.447 sum -0.379 2.495 -0.312 2.543 Atomic orbital electron populations 1.23352 0.76457 1.05500 1.02319 1.86195 1.23336 1.26090 1.88878 1.18628 0.89723 0.85824 1.01908 1.18476 0.88431 0.86199 1.02864 1.86220 1.18163 1.28553 1.89278 1.22788 0.79412 0.95511 1.06919 1.20410 0.82907 0.90609 0.75514 1.90776 1.63978 1.39917 1.49700 1.45329 1.05036 1.09651 1.74650 1.21750 0.93899 0.85501 0.97147 0.88931 1.23318 0.92339 1.04487 0.95691 1.21191 0.85911 0.99785 0.97272 0.85650 1.23299 0.95505 0.84668 1.02135 1.70179 1.00160 1.32466 1.22182 1.22748 1.00656 0.91368 1.06214 1.23285 0.82996 1.03085 1.08590 1.43292 1.09302 1.14154 1.49584 1.23551 0.94456 1.01878 0.98245 1.21266 1.02025 0.89508 1.05081 1.20826 0.93305 0.98253 1.02758 1.19484 0.93423 0.94502 1.01170 1.24872 1.01563 1.02053 0.90463 1.86448 1.63811 1.50255 1.36987 0.94287 0.78751 0.82349 0.76423 1.21081 1.00986 0.90053 1.04524 0.86757 0.91313 0.91733 0.85595 0.85777 0.73973 0.88375 0.88683 0.80519 0.77529 0.72844 0.90038 0.88290 0.81069 0.85127 0.88870 0.74519 1.21963 1.21215 0.82931 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.04 9.81 113.37 1.11 1.15 16 2 O -0.33 -3.90 10.28 -79.59 -0.82 -4.72 16 3 C 0.08 0.87 6.70 22.57 0.15 1.02 16 4 C 0.09 0.75 6.70 22.57 0.15 0.90 16 5 O -0.31 -3.16 9.46 -67.15 -0.63 -3.80 16 6 C 0.03 -0.02 5.22 71.24 0.37 0.35 16 7 C 0.52 1.88 7.91 87.66 0.69 2.58 16 8 O -0.57 -8.65 16.12 15.99 0.26 -8.39 16 9 N -0.69 2.92 5.26 -440.06 -2.32 0.60 16 10 C 0.12 -0.38 4.29 45.52 0.20 -0.18 16 11 H 0.09 0.13 7.50 -2.39 -0.02 0.11 16 12 C -0.12 0.61 7.37 31.12 0.23 0.84 16 13 C -0.02 0.08 4.18 -10.92 -0.05 0.03 16 14 H 0.13 -0.62 8.14 -2.39 -0.02 -0.64 16 15 C 0.21 0.45 7.36 138.13 1.02 1.47 16 16 N -0.53 -4.41 11.25 -188.14 -2.12 -6.53 16 17 C -0.06 -0.30 11.87 83.52 0.99 0.69 16 18 C -0.05 0.03 12.04 83.08 1.00 1.03 16 19 N -0.56 1.06 5.94 -186.27 -1.11 -0.05 16 20 C -0.14 0.68 7.37 31.21 0.23 0.91 16 21 C -0.16 -0.47 9.04 22.35 0.20 -0.27 16 22 C -0.13 -0.58 8.66 22.28 0.19 -0.38 16 23 C -0.09 -0.43 5.38 -19.86 -0.11 -0.54 16 24 C -0.08 0.09 2.79 71.24 0.20 0.29 16 25 O -0.56 0.43 12.81 -148.98 -1.91 -1.48 16 26 Si 0.78 -2.69 29.84 68.60 2.05 -0.64 16 27 C -0.15 -0.94 8.67 22.35 0.19 -0.75 16 28 H 0.11 -0.08 8.14 -2.39 -0.02 -0.10 16 29 H 0.07 -0.06 7.66 -2.39 -0.02 -0.07 16 30 H 0.06 0.02 7.66 -2.38 -0.02 0.01 16 31 H 0.13 -0.93 7.65 -2.39 -0.02 -0.94 16 32 H 0.12 -0.87 7.68 -2.39 -0.02 -0.89 16 33 H 0.42 -4.73 8.70 -92.71 -0.81 -5.53 16 34 H 0.10 -0.45 8.09 -2.38 -0.02 -0.47 16 35 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 36 H 0.18 0.26 8.06 -2.91 -0.02 0.24 16 37 H 0.21 -1.61 8.06 -2.91 -0.02 -1.63 16 38 H 0.43 -3.29 7.53 -92.71 -0.70 -3.99 16 39 H 0.08 -0.29 8.14 -2.38 -0.02 -0.31 16 40 H 0.10 -0.70 6.65 -2.39 -0.02 -0.71 16 41 H 0.17 -0.88 6.30 -2.91 -0.02 -0.90 16 42 H 0.13 0.27 4.85 -2.91 -0.01 0.26 16 43 H 0.09 -0.48 7.96 -2.39 -0.02 -0.50 16 44 H 0.40 -4.62 8.74 -74.05 -0.65 -5.27 16 45 H -0.29 -0.99 7.05 99.48 0.70 -0.29 16 46 H -0.29 -0.44 7.11 99.48 0.71 0.27 16 47 H 0.15 0.42 6.30 -2.91 -0.02 0.40 16 Total: 0.00 -36.60 392.46 -0.88 -37.48 By element: Atomic # 1 Polarization: -20.55 SS G_CDS: -1.07 Total: -21.62 kcal Atomic # 6 Polarization: 2.36 SS G_CDS: 6.78 Total: 9.14 kcal Atomic # 7 Polarization: -0.44 SS G_CDS: -5.54 Total: -5.98 kcal Atomic # 8 Polarization: -15.28 SS G_CDS: -3.10 Total: -18.39 kcal Atomic # 14 Polarization: -2.69 SS G_CDS: 2.05 Total: -0.64 kcal Total: -36.60 -0.88 -37.48 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16970406_60476.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.855 kcal (2) G-P(sol) polarization free energy of solvation -36.601 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.745 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.884 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.485 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.629 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds