Wall clock time and date at job start Tue Mar 9 2021 14:09:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46905 * 1 3 3 C 1.46900 * 110.99685 * 2 1 4 4 C 1.50700 * 109.47294 * 293.94704 * 3 2 1 5 5 O 1.21279 * 119.99795 * 0.02562 * 4 3 2 6 6 N 1.34773 * 120.00325 * 180.02562 * 4 3 2 7 7 C 1.46498 * 120.00318 * 180.02562 * 6 4 3 8 8 H 1.09004 * 112.84630 * 334.66446 * 7 6 4 9 9 C 1.53774 * 113.61507 * 105.86239 * 7 6 4 10 10 C 1.54048 * 86.98622 * 89.16576 * 9 7 6 11 11 H 1.09007 * 113.69015 * 270.87231 * 10 9 7 12 12 C 1.50703 * 113.62289 * 139.97782 * 10 9 7 13 13 N 1.30498 * 125.64747 * 167.19477 * 12 10 9 14 14 C 1.34128 * 109.25289 * 179.89518 * 13 12 10 15 15 C 1.34671 * 108.02089 * 0.36834 * 14 13 12 16 16 N 1.35036 * 125.64962 * 347.50474 * 12 10 9 17 17 C 1.53782 * 113.61538 * 203.47557 * 7 6 4 18 18 C 1.39676 * 110.99870 * 123.94817 * 2 1 3 19 19 C 1.38886 * 120.07123 * 116.04582 * 18 2 1 20 20 C 1.50698 * 120.04213 * 0.04885 * 19 18 2 21 21 O 1.42901 * 109.47110 * 284.97867 * 20 19 18 22 22 Si 1.86297 * 109.47516 * 164.97353 * 20 19 18 23 23 C 1.38133 * 119.92263 * 180.02562 * 19 18 2 24 24 C 1.38265 * 120.07407 * 0.28038 * 23 19 18 25 25 C 1.50698 * 119.92365 * 179.69849 * 24 23 19 26 26 F 1.39901 * 109.47046 * 90.00292 * 25 24 23 27 27 F 1.39898 * 109.47118 * 210.00072 * 25 24 23 28 28 F 1.39898 * 109.47325 * 329.99884 * 25 24 23 29 29 C 1.38306 * 120.14784 * 359.44555 * 24 23 19 30 30 C 1.38089 * 120.07673 * 0.55309 * 29 24 23 31 31 H 1.08995 * 109.47484 * 296.04926 * 1 2 3 32 32 H 1.09005 * 109.46350 * 56.05080 * 1 2 3 33 33 H 1.08999 * 109.46848 * 176.04488 * 1 2 3 34 34 H 1.08999 * 109.47636 * 53.95527 * 3 2 1 35 35 H 1.09007 * 109.47132 * 173.95308 * 3 2 1 36 36 H 0.97003 * 119.99434 * 0.02562 * 6 4 3 37 37 H 1.09002 * 113.61295 * 203.66737 * 9 7 6 38 38 H 1.08995 * 113.61564 * 334.56938 * 9 7 6 39 39 H 1.08001 * 125.99427 * 180.11629 * 14 13 12 40 40 H 1.07997 * 126.59326 * 179.81205 * 15 14 13 41 41 H 0.97001 * 126.39948 * 359.97438 * 16 12 10 42 42 H 1.08994 * 113.61567 * 25.42348 * 17 7 6 43 43 H 1.08999 * 113.61407 * 156.25232 * 17 7 6 44 44 H 1.09004 * 109.46707 * 44.97596 * 20 19 18 45 45 H 0.96702 * 113.99987 * 59.99098 * 21 20 19 46 46 H 1.48500 * 110.00076 * 300.00325 * 22 20 19 47 47 H 1.48504 * 109.99840 * 61.32066 * 22 20 19 48 48 H 1.08002 * 119.95961 * 179.97438 * 23 19 18 49 49 H 1.08003 * 119.96002 * 180.27453 * 29 24 23 50 50 H 1.07998 * 120.03790 * 179.70139 * 30 29 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4691 0.0000 0.0000 3 6 1.9954 1.3715 0.0000 4 6 1.6370 2.0471 -1.2985 5 8 1.0049 1.4456 -2.1408 6 7 2.0189 3.3198 -1.5238 7 6 1.6700 3.9768 -2.7859 8 1 1.5139 3.2708 -3.6015 9 6 0.5465 5.0177 -2.6485 10 6 1.6505 6.0509 -2.3543 11 1 1.9056 6.1304 -1.2975 12 6 1.4111 7.3910 -3.0008 13 7 2.0537 8.4933 -2.7267 14 6 1.5784 9.4849 -3.4947 15 6 0.5988 8.9797 -4.2685 16 7 0.4923 7.6514 -3.9555 17 6 2.6026 5.1437 -3.1513 18 6 1.9696 -0.7282 1.0817 19 6 2.7117 -1.8812 0.8608 20 6 2.9791 -2.3481 -0.5469 21 8 1.7927 -2.9321 -1.0886 22 14 4.3443 -3.6157 -0.5320 23 6 3.2047 -2.5993 1.9328 24 6 2.9553 -2.1746 3.2248 25 6 3.4891 -2.9644 4.3919 26 9 4.7616 -2.4924 4.7314 27 9 2.6301 -2.8175 5.4863 28 9 3.5713 -4.3163 4.0418 29 6 2.2215 -1.0238 3.4482 30 6 1.7256 -0.3011 2.3811 31 1 -0.3634 0.4513 0.9232 32 1 -0.3632 0.5740 -0.8526 33 1 -0.3633 -1.0252 -0.0709 34 1 1.5611 1.9274 0.8309 35 1 3.0798 1.3445 0.1083 36 1 2.5248 3.8008 -0.8502 37 1 0.0092 5.2055 -3.5781 38 1 -0.1179 4.8341 -1.8042 39 1 1.9185 10.5100 -3.4902 40 1 0.0107 9.5187 -4.9964 41 1 -0.1275 7.0159 -4.3465 42 1 3.5970 5.0618 -2.7126 43 1 2.6276 5.3650 -4.2183 44 1 3.2788 -1.4986 -1.1606 45 1 1.0388 -2.3276 -1.1267 46 1 5.5837 -3.0207 0.0291 47 1 3.9353 -4.7930 0.2754 48 1 3.7815 -3.4962 1.7617 49 1 2.0323 -0.6924 4.4585 50 1 1.1486 0.5948 2.5563 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16970406_6406254.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:09:12 Heat of formation + Delta-G solvation = -75.326862 kcal Electronic energy + Delta-G solvation = -39166.965118 eV Core-core repulsion = 33555.575332 eV Total energy + Delta-G solvation = -5611.389787 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 411.156 amu Computer time = 1.43 seconds Orbital eigenvalues (eV) -51.37739 -48.90348 -48.83864 -43.09140 -41.86989 -40.99353 -39.40196 -37.65102 -37.53536 -34.48617 -33.43760 -33.10541 -32.23359 -30.75224 -29.33236 -27.72868 -26.99049 -26.79927 -26.17400 -25.08072 -23.60130 -22.62417 -22.19269 -21.75330 -21.57234 -20.43679 -19.73156 -19.68015 -19.56477 -19.07247 -18.45383 -18.16973 -17.65243 -17.07177 -17.00088 -16.56495 -16.34089 -16.16777 -15.85942 -15.78705 -15.75318 -15.55395 -15.46413 -15.32672 -15.26382 -15.04230 -15.00149 -14.99609 -14.81674 -14.74056 -14.53194 -14.48735 -14.05606 -13.99137 -13.70501 -13.60165 -13.42665 -13.33987 -13.00755 -12.82036 -12.65431 -12.45482 -12.30298 -11.84642 -11.48139 -11.43636 -11.06925 -11.04515 -11.01062 -10.89874 -10.35891 -10.19179 -10.08720 -9.69114 -9.34748 -4.88907 -0.48550 -0.11554 1.09777 1.31501 1.42857 1.56907 1.59720 1.86069 1.88161 2.06296 2.12394 2.22239 2.48112 2.66789 2.78012 3.18456 3.30544 3.40407 3.41391 3.46810 3.57735 3.69001 3.80995 3.81668 3.95580 3.97915 4.04253 4.10543 4.16007 4.24939 4.27339 4.35245 4.43882 4.47324 4.53348 4.55558 4.58923 4.63174 4.66362 4.81249 4.83374 4.85782 4.90120 4.97222 4.98636 5.04538 5.10259 5.16676 5.27349 5.54309 5.58284 5.79080 6.02177 6.49064 6.53888 6.61811 7.13427 7.25758 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 N -0.502 5.502 3 C 0.036 3.964 4 C 0.520 3.480 5 O -0.553 6.553 6 N -0.703 5.703 7 C 0.129 3.871 8 H 0.095 0.905 9 C -0.139 4.139 10 C -0.023 4.023 11 H 0.123 0.877 12 C 0.209 3.791 13 N -0.532 5.532 14 C -0.064 4.064 15 C -0.046 4.046 16 N -0.558 5.558 17 C -0.124 4.124 18 C 0.136 3.864 19 C -0.098 4.098 20 C -0.069 4.069 21 O -0.544 6.544 22 Si 0.786 3.214 23 C -0.084 4.084 24 C -0.187 4.187 25 C 0.507 3.493 26 F -0.179 7.179 27 F -0.174 7.174 28 F -0.186 7.186 29 C -0.053 4.053 30 C -0.134 4.134 31 H 0.047 0.953 32 H 0.087 0.913 33 H 0.071 0.929 34 H 0.102 0.898 35 H 0.122 0.878 36 H 0.416 0.584 37 H 0.096 0.904 38 H 0.082 0.918 39 H 0.176 0.824 40 H 0.207 0.793 41 H 0.431 0.569 42 H 0.089 0.911 43 H 0.094 0.906 44 H 0.092 0.908 45 H 0.373 0.627 46 H -0.262 1.262 47 H -0.289 1.289 48 H 0.125 0.875 49 H 0.160 0.840 50 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.562 5.521 -2.586 6.613 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 N -0.223 5.223 3 C -0.093 4.093 4 C 0.307 3.693 5 O -0.431 6.431 6 N -0.356 5.356 7 C 0.023 3.977 8 H 0.113 0.887 9 C -0.178 4.178 10 C -0.043 4.043 11 H 0.141 0.859 12 C -0.055 4.055 13 N -0.252 5.252 14 C -0.211 4.211 15 C -0.180 4.180 16 N -0.163 5.163 17 C -0.163 4.163 18 C 0.042 3.958 19 C -0.100 4.100 20 C -0.179 4.179 21 O -0.351 6.351 22 Si 0.689 3.311 23 C -0.102 4.102 24 C -0.189 4.189 25 C 0.453 3.547 26 F -0.160 7.160 27 F -0.155 7.155 28 F -0.167 7.167 29 C -0.071 4.071 30 C -0.154 4.154 31 H 0.066 0.934 32 H 0.105 0.895 33 H 0.089 0.911 34 H 0.120 0.880 35 H 0.140 0.860 36 H 0.254 0.746 37 H 0.114 0.886 38 H 0.101 0.899 39 H 0.193 0.807 40 H 0.224 0.776 41 H 0.272 0.728 42 H 0.108 0.892 43 H 0.113 0.887 44 H 0.110 0.890 45 H 0.222 0.778 46 H -0.187 1.187 47 H -0.216 1.216 48 H 0.143 0.857 49 H 0.177 0.823 50 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges -1.281 4.032 -2.600 4.965 hybrid contribution -1.678 1.295 1.318 2.496 sum -2.959 5.327 -1.282 6.227 Atomic orbital electron populations 1.22668 0.83677 1.03582 1.02464 1.59172 1.10052 1.13320 1.39762 1.22175 1.03569 0.87942 0.95582 1.20614 0.78541 0.81365 0.88773 1.90717 1.40289 1.64748 1.47296 1.45546 1.57512 1.13159 1.19401 1.21645 0.95439 0.93335 0.87264 0.88701 1.23523 0.96626 0.94256 1.03442 1.21205 0.98516 0.84365 1.00222 0.85945 1.23363 0.91572 0.96978 0.93610 1.70178 1.28579 0.99613 1.26865 1.22736 0.99632 0.99990 0.98725 1.23272 1.04385 0.84479 1.05856 1.43276 1.30563 1.10491 1.31941 1.23320 0.98856 0.92732 1.01399 1.18809 0.94661 0.92747 0.89550 1.20326 0.98422 0.95179 0.96038 1.25172 0.95916 1.07043 0.89725 1.86679 1.21645 1.42098 1.84678 0.92400 0.74101 0.76341 0.88277 1.20794 0.98713 0.99106 0.91627 1.19977 1.06878 1.00096 0.91929 1.18411 0.75724 0.77597 0.83017 1.93234 1.41376 1.88178 1.93237 1.93204 1.70004 1.95430 1.56842 1.93195 1.96166 1.35367 1.91966 1.21132 0.92951 0.91280 1.01759 1.21965 1.00420 1.01621 0.91354 0.93409 0.89470 0.91055 0.88048 0.86016 0.74650 0.88553 0.89894 0.80672 0.77575 0.72799 0.89190 0.88728 0.89025 0.77810 1.18739 1.21627 0.85733 0.82272 0.81559 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 8.75 127.69 1.12 1.02 16 2 N -0.50 2.09 3.22 -724.42 -2.33 -0.24 16 3 C 0.04 -0.31 5.03 85.56 0.43 0.12 16 4 C 0.52 -2.34 7.52 87.66 0.66 -1.68 16 5 O -0.55 -2.12 13.95 -3.03 -0.04 -2.16 16 6 N -0.70 6.27 5.26 -440.05 -2.32 3.95 16 7 C 0.13 -0.92 4.29 45.52 0.20 -0.72 16 8 H 0.09 -0.30 7.50 -2.38 -0.02 -0.32 16 9 C -0.14 1.16 7.37 31.21 0.23 1.39 16 10 C -0.02 0.13 4.18 -10.92 -0.05 0.09 16 11 H 0.12 -0.82 8.14 -2.38 -0.02 -0.84 16 12 C 0.21 0.11 7.37 138.13 1.02 1.13 16 13 N -0.53 -3.82 11.25 -188.13 -2.12 -5.94 16 14 C -0.06 -0.24 11.87 83.52 0.99 0.75 16 15 C -0.05 0.09 12.04 83.09 1.00 1.09 16 16 N -0.56 1.99 5.94 -186.28 -1.11 0.88 16 17 C -0.12 0.90 7.37 31.12 0.23 1.13 16 18 C 0.14 -0.35 4.62 38.21 0.18 -0.18 16 19 C -0.10 -0.19 5.28 -19.73 -0.10 -0.29 16 20 C -0.07 -0.13 2.30 71.24 0.16 0.03 16 21 O -0.54 -2.42 12.65 -148.98 -1.89 -4.30 16 22 Si 0.79 1.39 30.41 68.60 2.09 3.48 16 23 C -0.08 -0.36 8.01 22.25 0.18 -0.19 16 24 C -0.19 -0.49 5.45 -19.84 -0.11 -0.60 16 25 C 0.51 2.53 3.36 71.24 0.24 2.77 16 26 F -0.18 -1.09 17.30 44.97 0.78 -0.31 16 27 F -0.17 -0.77 16.46 44.97 0.74 -0.03 16 28 F -0.19 -1.50 16.46 44.97 0.74 -0.76 16 29 C -0.05 0.15 9.39 22.25 0.21 0.35 16 30 C -0.13 0.76 8.66 22.40 0.19 0.95 16 31 H 0.05 -0.36 7.34 -2.39 -0.02 -0.38 16 32 H 0.09 -0.10 5.82 -2.38 -0.01 -0.11 16 33 H 0.07 -0.25 7.42 -2.39 -0.02 -0.26 16 34 H 0.10 -1.40 7.48 -2.39 -0.02 -1.41 16 35 H 0.12 -1.29 8.06 -2.38 -0.02 -1.31 16 36 H 0.42 -5.81 8.70 -92.71 -0.81 -6.62 16 37 H 0.10 -0.98 6.65 -2.39 -0.02 -1.00 16 38 H 0.08 -0.64 8.14 -2.39 -0.02 -0.66 16 39 H 0.18 0.12 8.06 -2.91 -0.02 0.10 16 40 H 0.21 -1.84 8.06 -2.91 -0.02 -1.87 16 41 H 0.43 -4.14 7.54 -92.71 -0.70 -4.83 16 42 H 0.09 -0.70 8.14 -2.39 -0.02 -0.72 16 43 H 0.09 -0.59 8.10 -2.39 -0.02 -0.61 16 44 H 0.09 0.02 7.78 -2.39 -0.02 0.00 16 45 H 0.37 0.61 7.51 -74.06 -0.56 0.06 16 46 H -0.26 -1.04 7.11 99.48 0.71 -0.34 16 47 H -0.29 -2.37 6.81 99.48 0.68 -1.69 16 48 H 0.13 0.79 4.48 -2.91 -0.01 0.77 16 49 H 0.16 -1.04 7.60 -2.91 -0.02 -1.06 16 50 H 0.17 -1.92 7.14 -2.91 -0.02 -1.94 16 Total: 0.00 -23.62 419.33 0.32 -23.30 By element: Atomic # 1 Polarization: -24.06 SS G_CDS: -1.00 Total: -25.05 kcal Atomic # 6 Polarization: 0.39 SS G_CDS: 6.77 Total: 7.17 kcal Atomic # 7 Polarization: 6.53 SS G_CDS: -7.87 Total: -1.34 kcal Atomic # 8 Polarization: -4.53 SS G_CDS: -1.93 Total: -6.46 kcal Atomic # 9 Polarization: -3.36 SS G_CDS: 2.26 Total: -1.10 kcal Atomic # 14 Polarization: 1.39 SS G_CDS: 2.09 Total: 3.48 kcal Total: -23.62 0.32 -23.30 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16970406_6406254.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.023 kcal (2) G-P(sol) polarization free energy of solvation -23.625 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.648 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.321 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.304 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.327 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.43 seconds