Wall clock time and date at job start Tue Mar 9 2021 15:36:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.37867 * 126.45911 * 2 1 4 4 C 1.46680 * 126.23251 * 359.92648 * 3 2 1 5 5 O 1.21695 * 119.99861 * 355.13984 * 4 3 2 6 6 N 1.34781 * 119.99796 * 175.13427 * 4 3 2 7 7 C 1.46498 * 120.00250 * 5.67922 * 6 4 3 8 8 C 1.46500 * 119.99466 * 185.67512 * 6 4 3 9 9 H 1.08995 * 112.85355 * 353.95377 * 8 6 4 10 10 C 1.53782 * 113.61303 * 125.15056 * 8 6 4 11 11 C 1.53777 * 87.08414 * 139.97603 * 10 8 6 12 12 H 1.08999 * 113.62145 * 219.93720 * 11 10 8 13 13 O 1.42902 * 113.61153 * 89.11217 * 11 10 8 14 14 C 1.53785 * 87.08257 * 334.56930 * 11 10 8 15 15 N 1.37653 * 107.53488 * 180.19421 * 3 2 1 16 16 C 1.35535 * 108.64431 * 359.62566 * 15 3 2 17 17 C 1.50692 * 125.56653 * 180.10988 * 16 15 3 18 18 O 1.42902 * 109.46918 * 65.28708 * 17 16 15 19 19 Si 1.86303 * 109.47349 * 185.28703 * 17 16 15 20 20 C 1.35460 * 108.86886 * 0.37864 * 16 15 3 21 21 H 1.08999 * 109.47802 * 90.00049 * 1 2 3 22 22 H 1.09003 * 109.47538 * 210.00034 * 1 2 3 23 23 H 1.08999 * 109.47414 * 329.99763 * 1 2 3 24 24 H 1.08996 * 109.46913 * 175.45051 * 7 6 4 25 25 H 1.08996 * 109.47407 * 55.44418 * 7 6 4 26 26 H 1.09006 * 109.46729 * 295.45121 * 7 6 4 27 27 H 1.08994 * 113.61785 * 254.52607 * 10 8 6 28 28 H 1.09010 * 113.61466 * 25.43242 * 10 8 6 29 29 H 0.96699 * 114.00301 * 179.97438 * 13 11 10 30 30 H 1.08996 * 113.61454 * 270.88338 * 14 11 10 31 31 H 1.08998 * 113.61335 * 139.97501 * 14 11 10 32 32 H 0.96996 * 125.67861 * 179.73716 * 15 3 2 33 33 H 1.08997 * 109.47387 * 305.28859 * 17 16 15 34 34 H 0.96704 * 114.00028 * 179.97438 * 18 17 16 35 35 H 1.48503 * 109.99548 * 299.99975 * 19 17 16 36 36 H 1.48500 * 109.99838 * 61.31826 * 19 17 16 37 37 H 1.07994 * 126.06654 * 179.74201 * 20 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.3262 1.1088 0.0000 4 6 1.8898 2.5092 -0.0015 5 8 0.7063 2.7776 -0.0922 6 7 2.7996 3.4987 0.0977 7 6 4.2301 3.1828 0.0816 8 6 2.3580 4.8900 0.2214 9 1 1.2790 5.0026 0.1157 10 6 2.9352 5.6126 1.4501 11 6 3.1010 6.8471 0.5483 12 1 4.0287 7.3926 0.7209 13 8 1.9530 7.6977 0.5256 14 6 3.1692 5.8727 -0.6396 15 7 3.6283 0.6624 -0.0044 16 6 3.6217 -0.6929 0.0012 17 6 4.8433 -1.5754 0.0013 18 8 5.5628 -1.3926 1.2224 19 14 4.3220 -3.3575 -0.1515 20 6 2.3378 -1.1248 0.0008 21 1 -0.3635 0.0000 -1.0276 22 1 -0.3634 -0.8900 0.5138 23 1 -0.3634 0.8899 0.5139 24 1 4.8065 4.1079 0.0900 25 1 4.4668 2.6153 -0.8183 26 1 4.4811 2.5902 0.9614 27 1 2.2124 5.7529 2.2537 28 1 3.8806 5.1957 1.7976 29 1 2.0513 8.4761 -0.0396 30 1 4.1783 5.5269 -0.8633 31 1 2.6350 6.2230 -1.5228 32 1 4.4190 1.2242 -0.0091 33 1 5.4830 -1.3105 -0.8404 34 1 6.3629 -1.9312 1.2919 35 1 3.4493 -3.7310 0.9904 36 1 3.6003 -3.5674 -1.4323 37 1 2.0135 -2.1548 0.0006 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16982422_13940406.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:36:48 Heat of formation + Delta-G solvation = -16.323423 kcal Electronic energy + Delta-G solvation = -20977.610755 eV Core-core repulsion = 17724.366144 eV Total energy + Delta-G solvation = -3253.244611 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -42.72956 -41.16894 -39.40900 -37.78231 -36.89196 -34.92143 -33.35631 -31.67731 -28.92321 -27.86929 -27.28437 -26.90611 -24.98716 -22.29891 -21.56889 -20.47349 -20.14868 -18.78676 -18.62638 -18.32980 -17.48308 -17.00325 -16.79883 -16.06935 -15.81186 -15.40304 -15.13984 -14.94465 -14.56059 -14.49878 -14.23485 -13.90946 -13.66402 -13.57627 -13.45331 -13.30730 -13.18444 -13.01485 -12.94972 -12.42247 -12.32472 -11.99089 -11.44677 -11.03216 -10.82432 -10.56658 -9.88472 -9.73216 -9.10006 -5.06328 0.38719 1.10783 1.50540 1.67343 1.76287 1.98107 2.18814 2.34956 2.91587 3.19745 3.33914 3.43292 3.58765 3.65247 3.67827 3.73201 3.96962 4.01648 4.05675 4.13591 4.18294 4.39060 4.44563 4.46198 4.67128 4.73643 4.77260 4.86332 4.90346 5.03875 5.06153 5.24101 5.38427 5.44989 5.72104 5.92649 6.23682 6.32126 6.41875 6.56707 7.11601 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 C -0.063 4.063 3 C -0.053 4.053 4 C 0.593 3.407 5 O -0.518 6.518 6 N -0.609 5.609 7 C 0.059 3.941 8 C 0.131 3.869 9 H 0.129 0.871 10 C -0.147 4.147 11 C 0.084 3.916 12 H 0.076 0.924 13 O -0.549 6.549 14 C -0.184 4.184 15 N -0.529 5.529 16 C 0.066 3.934 17 C -0.059 4.059 18 O -0.549 6.549 19 Si 0.716 3.284 20 C -0.206 4.206 21 H 0.070 0.930 22 H 0.064 0.936 23 H 0.081 0.919 24 H 0.094 0.906 25 H 0.064 0.936 26 H 0.066 0.934 27 H 0.085 0.915 28 H 0.097 0.903 29 H 0.385 0.615 30 H 0.093 0.907 31 H 0.082 0.918 32 H 0.420 0.580 33 H 0.075 0.925 34 H 0.387 0.613 35 H -0.247 1.247 36 H -0.252 1.252 37 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.591 -0.828 -1.486 8.758 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.071 4.071 3 C -0.166 4.166 4 C 0.383 3.617 5 O -0.393 6.393 6 N -0.342 5.342 7 C -0.085 4.085 8 C 0.028 3.972 9 H 0.147 0.853 10 C -0.185 4.185 11 C 0.024 3.976 12 H 0.094 0.906 13 O -0.355 6.355 14 C -0.223 4.223 15 N -0.133 5.133 16 C -0.052 4.052 17 C -0.169 4.169 18 O -0.356 6.356 19 Si 0.615 3.385 20 C -0.231 4.231 21 H 0.089 0.911 22 H 0.083 0.917 23 H 0.099 0.901 24 H 0.113 0.887 25 H 0.083 0.917 26 H 0.084 0.916 27 H 0.104 0.896 28 H 0.115 0.885 29 H 0.233 0.767 30 H 0.111 0.889 31 H 0.100 0.900 32 H 0.267 0.733 33 H 0.093 0.907 34 H 0.235 0.765 35 H -0.171 1.171 36 H -0.176 1.176 37 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 6.692 -1.112 -1.094 6.871 hybrid contribution 0.835 1.233 -0.507 1.573 sum 7.527 0.121 -1.601 7.696 Atomic orbital electron populations 1.20371 0.88755 1.03124 1.02583 1.19895 0.96063 0.90150 1.01042 1.20153 0.83530 0.93435 1.19486 1.17075 0.85544 0.82916 0.76160 1.90834 1.15989 1.82944 1.49557 1.47709 1.05839 1.06902 1.73769 1.22060 0.82242 1.03141 1.01043 1.22681 1.01170 0.77712 0.95682 0.85280 1.23583 1.02647 0.94170 0.98134 1.22469 0.88939 0.90341 0.95888 0.90614 1.86498 1.38602 1.39113 1.71239 1.24191 1.01426 0.97577 0.99104 1.42951 1.07722 1.06521 1.56117 1.19949 0.94992 0.83176 1.07121 1.24509 0.92860 1.09774 0.89718 1.86488 1.42435 1.69729 1.36969 0.95256 0.86274 0.75927 0.81079 1.20481 0.91108 0.98695 1.12771 0.91100 0.91732 0.90050 0.88727 0.91727 0.91556 0.89637 0.88492 0.76729 0.88853 0.89961 0.73342 0.90735 0.76506 1.17141 1.17644 0.84074 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.36 9.78 36.00 0.35 -0.01 16 2 C -0.06 -0.31 6.21 -104.16 -0.65 -0.95 16 3 C -0.05 -0.23 6.80 -81.98 -0.56 -0.78 16 4 C 0.59 2.86 7.64 -12.85 -0.10 2.76 16 5 O -0.52 -4.05 14.33 5.19 0.07 -3.97 16 6 N -0.61 -0.94 3.09 -174.54 -0.54 -1.48 16 7 C 0.06 -0.13 7.57 59.85 0.45 0.33 16 8 C 0.13 0.18 4.18 -67.11 -0.28 -0.10 16 9 H 0.13 0.52 7.17 -51.93 -0.37 0.15 16 10 C -0.15 0.01 7.41 -25.92 -0.19 -0.18 16 11 C 0.08 -0.08 5.28 -25.92 -0.14 -0.22 16 12 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 13 O -0.55 -0.25 13.59 -35.23 -0.48 -0.73 16 14 C -0.18 0.21 7.32 -25.91 -0.19 0.02 16 15 N -0.53 -0.98 5.25 -5.70 -0.03 -1.01 16 16 C 0.07 0.16 6.50 -81.95 -0.53 -0.37 16 17 C -0.06 0.06 3.07 36.00 0.11 0.17 16 18 O -0.55 0.64 12.86 -35.23 -0.45 0.19 16 19 Si 0.72 -1.31 30.56 -169.99 -5.19 -6.50 16 20 C -0.21 -0.80 9.27 -39.98 -0.37 -1.17 16 21 H 0.07 0.25 8.14 -51.93 -0.42 -0.17 16 22 H 0.06 0.16 8.14 -51.93 -0.42 -0.26 16 23 H 0.08 0.43 6.60 -51.93 -0.34 0.09 16 24 H 0.09 -0.40 5.67 -51.93 -0.29 -0.70 16 25 H 0.06 -0.19 6.65 -51.93 -0.35 -0.53 16 26 H 0.07 -0.16 6.91 -51.93 -0.36 -0.52 16 27 H 0.08 0.12 8.14 -51.93 -0.42 -0.30 16 28 H 0.10 -0.17 7.24 -51.92 -0.38 -0.54 16 29 H 0.38 -1.45 9.12 45.56 0.42 -1.04 16 30 H 0.09 -0.26 6.24 -51.93 -0.32 -0.58 16 31 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 32 H 0.42 -0.36 4.47 -40.82 -0.18 -0.54 16 33 H 0.07 -0.24 7.96 -51.93 -0.41 -0.65 16 34 H 0.39 -2.45 8.74 45.56 0.40 -2.05 16 35 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 36 H -0.25 -0.23 7.11 56.52 0.40 0.17 16 37 H 0.14 0.41 6.19 -52.49 -0.32 0.09 16 LS Contribution 298.56 15.07 4.50 4.50 Total: 0.00 -9.98 298.56 -8.04 -18.02 By element: Atomic # 1 Polarization: -4.66 SS G_CDS: -3.83 Total: -8.50 kcal Atomic # 6 Polarization: 1.57 SS G_CDS: -2.09 Total: -0.52 kcal Atomic # 7 Polarization: -1.92 SS G_CDS: -0.57 Total: -2.49 kcal Atomic # 8 Polarization: -3.66 SS G_CDS: -0.86 Total: -4.52 kcal Atomic # 14 Polarization: -1.31 SS G_CDS: -5.19 Total: -6.50 kcal Total LS contribution 4.50 Total: 4.50 kcal Total: -9.98 -8.04 -18.02 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16982422_13940406.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.699 kcal (2) G-P(sol) polarization free energy of solvation -9.982 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.283 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.041 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.022 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.323 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds