Wall clock time and date at job start Tue Mar 9 2021 15:37:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.34779 * 119.99457 * 2 1 4 4 O 1.21614 * 119.99436 * 181.00834 * 3 2 1 5 5 C 1.47370 * 120.00412 * 1.01093 * 3 2 1 6 6 C 1.36422 * 127.19398 * 169.37171 * 5 3 2 7 7 C 1.50701 * 125.79734 * 0.04221 * 6 5 3 8 8 O 1.42906 * 109.46912 * 89.99708 * 7 6 5 9 9 C 1.35901 * 116.99303 * 179.97438 * 8 7 6 10 10 C 1.38741 * 120.04908 * 180.02562 * 9 8 7 11 11 C 1.38144 * 119.93898 * 180.02562 * 10 9 8 12 12 C 1.38260 * 120.06126 * 0.02562 * 11 10 9 13 13 C 1.50700 * 119.94842 * 179.97438 * 12 11 10 14 14 O 1.42900 * 109.47162 * 299.99882 * 13 12 11 15 15 Si 1.86302 * 109.47178 * 179.97438 * 13 12 11 16 16 C 1.38273 * 120.10947 * 0.24549 * 12 11 10 17 17 C 1.38142 * 120.05164 * 359.46102 * 16 12 11 18 18 O 1.33649 * 108.39639 * 180.30080 * 6 5 3 19 19 C 1.34213 * 110.90790 * 359.55692 * 18 6 5 20 20 C 1.34170 * 109.12751 * 0.44924 * 19 18 6 21 21 C 1.46495 * 120.00087 * 180.02562 * 2 1 3 22 22 H 1.08999 * 112.84906 * 168.80119 * 21 2 1 23 23 C 1.53781 * 113.61494 * 299.99594 * 21 2 1 24 24 C 1.53773 * 87.08272 * 139.98369 * 23 21 2 25 25 H 1.09005 * 113.61476 * 219.93729 * 24 23 21 26 26 O 1.42901 * 113.61632 * 89.11646 * 24 23 21 27 27 C 1.53781 * 113.61618 * 37.49341 * 21 2 1 28 28 H 1.08996 * 109.47616 * 83.30703 * 1 2 3 29 29 H 1.09002 * 109.46836 * 203.31209 * 1 2 3 30 30 H 1.09007 * 109.47200 * 323.30281 * 1 2 3 31 31 H 1.08990 * 109.47592 * 329.99593 * 7 6 5 32 32 H 1.09005 * 109.46615 * 209.99224 * 7 6 5 33 33 H 1.07996 * 120.02982 * 359.97438 * 10 9 8 34 34 H 1.08006 * 119.96994 * 179.97438 * 11 10 9 35 35 H 1.09001 * 109.47057 * 60.00275 * 13 12 11 36 36 H 0.96697 * 113.99584 * 299.99712 * 14 13 12 37 37 H 1.48502 * 109.99946 * 180.02562 * 15 13 12 38 38 H 1.48500 * 110.00004 * 301.31812 * 15 13 12 39 39 H 1.07999 * 119.97218 * 179.70216 * 16 12 11 40 40 H 1.08000 * 120.02720 * 180.24769 * 17 16 12 41 41 H 1.08007 * 125.43525 * 180.16870 * 19 18 6 42 42 H 1.08000 * 127.02871 * 179.71522 * 20 19 18 43 43 H 1.09004 * 113.61337 * 254.53421 * 23 21 2 44 44 H 1.09002 * 113.61312 * 25.34448 * 23 21 2 45 45 H 0.96700 * 114.00035 * 180.02562 * 26 24 23 46 46 H 1.08994 * 113.61393 * 334.56506 * 27 21 2 47 47 H 1.09001 * 113.61114 * 105.47437 * 27 21 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1388 1.1673 0.0000 4 8 3.3548 1.1674 -0.0185 5 6 1.4021 2.4434 0.0225 6 6 1.9178 3.6899 0.2261 7 6 3.3688 4.0142 0.4717 8 8 4.0215 4.2529 -0.7770 9 6 5.3443 4.5614 -0.7325 10 6 6.0405 4.8059 -1.9074 11 6 7.3853 5.1188 -1.8596 12 6 8.0374 5.1877 -0.6424 13 6 9.5045 5.5286 -0.5932 14 8 10.2454 4.5520 -1.3277 15 14 10.0799 5.5421 1.1786 16 6 7.3471 4.9389 0.5295 17 6 6.0009 4.6317 0.4875 18 8 0.9166 4.5739 0.1763 19 6 -0.2526 3.9602 -0.0638 20 6 -0.0425 2.6393 -0.1687 21 6 2.1975 -1.2687 -0.0006 22 1 3.2624 -1.1424 -0.1956 23 6 1.8955 -2.1549 1.2193 24 6 1.9130 -3.3526 0.2550 25 1 1.1392 -4.0917 0.4625 26 8 3.2072 -3.9355 0.0897 27 6 1.5374 -2.3608 -0.8587 28 1 -0.3634 0.1198 -1.0206 29 1 -0.3633 -0.9438 0.4067 30 1 -0.3634 0.8240 0.6142 31 1 3.8479 3.1761 0.9776 32 1 3.4414 4.9050 1.0958 33 1 5.5319 4.7510 -2.8585 34 1 7.9278 5.3088 -2.7739 35 1 9.6638 6.5127 -1.0340 36 1 10.1504 3.6508 -0.9903 37 1 11.5252 5.8776 1.2408 38 1 9.2953 6.5316 1.9600 39 1 7.8598 4.9887 1.4787 40 1 5.4612 4.4414 1.4034 41 1 -1.2106 4.4510 -0.1533 42 1 -0.7831 1.8756 -0.3553 43 1 2.6999 -2.1746 1.9547 44 1 0.9190 -1.9659 1.6653 45 1 3.2247 -4.6891 -0.5161 46 1 0.4624 -2.2292 -0.9817 47 1 2.0528 -2.5467 -1.8010 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16982422_4549634.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:37:21 Heat of formation + Delta-G solvation = -47.186182 kcal Electronic energy + Delta-G solvation = -32056.285607 eV Core-core repulsion = 27561.322032 eV Total energy + Delta-G solvation = -4494.963575 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.150 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -43.77962 -41.40669 -41.32127 -39.65563 -39.23500 -37.20996 -36.80658 -35.08436 -33.63841 -32.84839 -32.01808 -31.42249 -28.44442 -28.01037 -26.80146 -26.35427 -25.90275 -23.97301 -23.56798 -22.57430 -22.29423 -20.61114 -20.12397 -19.54573 -18.73049 -18.43660 -18.24988 -17.69259 -17.27909 -17.26280 -17.01298 -16.80451 -16.41965 -16.33953 -16.02106 -15.92499 -15.66939 -15.45691 -14.91393 -14.74326 -14.61934 -14.43676 -14.37194 -14.10990 -13.98511 -13.67239 -13.59057 -13.55524 -13.52672 -13.10099 -12.84021 -12.46230 -12.26619 -12.21534 -12.11749 -12.08614 -11.77274 -11.36670 -11.17205 -10.90677 -10.77229 -10.43590 -10.09797 -9.97659 -9.62141 -9.27011 -5.00367 -0.06690 0.23215 0.25550 1.01826 1.31632 1.49642 1.61500 1.86814 1.93985 2.04278 2.41669 2.61160 3.09385 3.31966 3.41105 3.50319 3.52571 3.61534 3.65462 3.70007 3.77417 3.80655 3.87502 3.91125 4.03075 4.10223 4.17190 4.25318 4.38253 4.42400 4.45888 4.48181 4.52781 4.59752 4.62265 4.64739 4.74965 4.78360 4.86637 4.91419 4.93499 4.96296 5.10401 5.13915 5.21235 5.25091 5.43554 5.50264 5.65242 5.87688 6.22395 6.25452 6.75702 6.86337 6.99328 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.046 3.954 2 N -0.592 5.592 3 C 0.574 3.426 4 O -0.576 6.576 5 C -0.220 4.220 6 C 0.037 3.963 7 C 0.138 3.862 8 O -0.322 6.322 9 C 0.124 3.876 10 C -0.163 4.163 11 C -0.058 4.058 12 C -0.160 4.160 13 C -0.069 4.069 14 O -0.557 6.557 15 Si 0.772 3.228 16 C -0.076 4.076 17 C -0.206 4.206 18 O -0.177 6.177 19 C -0.011 4.011 20 C -0.211 4.211 21 C 0.116 3.884 22 H 0.085 0.915 23 C -0.143 4.143 24 C 0.085 3.915 25 H 0.103 0.897 26 O -0.577 6.577 27 C -0.168 4.168 28 H 0.076 0.924 29 H 0.098 0.902 30 H 0.100 0.900 31 H 0.102 0.898 32 H 0.101 0.899 33 H 0.132 0.868 34 H 0.140 0.860 35 H 0.108 0.892 36 H 0.394 0.606 37 H -0.297 1.297 38 H -0.283 1.283 39 H 0.151 0.849 40 H 0.148 0.852 41 H 0.255 0.745 42 H 0.207 0.793 43 H 0.061 0.939 44 H 0.121 0.879 45 H 0.400 0.600 46 H 0.119 0.881 47 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.653 -4.573 2.481 10.966 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 N -0.323 5.323 3 C 0.365 3.635 4 O -0.457 6.457 5 C -0.224 4.224 6 C -0.016 4.016 7 C 0.064 3.936 8 O -0.237 6.237 9 C 0.079 3.921 10 C -0.182 4.182 11 C -0.076 4.076 12 C -0.161 4.161 13 C -0.179 4.179 14 O -0.365 6.365 15 Si 0.678 3.322 16 C -0.093 4.093 17 C -0.225 4.225 18 O -0.073 6.073 19 C -0.076 4.076 20 C -0.229 4.229 21 C 0.013 3.987 22 H 0.104 0.896 23 C -0.182 4.182 24 C 0.026 3.974 25 H 0.120 0.880 26 O -0.385 6.385 27 C -0.206 4.206 28 H 0.095 0.905 29 H 0.116 0.884 30 H 0.118 0.882 31 H 0.120 0.880 32 H 0.119 0.881 33 H 0.150 0.850 34 H 0.157 0.843 35 H 0.125 0.875 36 H 0.244 0.756 37 H -0.225 1.225 38 H -0.209 1.209 39 H 0.168 0.832 40 H 0.165 0.835 41 H 0.270 0.730 42 H 0.224 0.776 43 H 0.080 0.920 44 H 0.139 0.861 45 H 0.251 0.749 46 H 0.138 0.862 47 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -8.474 -2.860 3.057 9.452 hybrid contribution -0.226 -0.123 -0.966 1.000 sum -8.700 -2.983 2.091 9.432 Atomic orbital electron populations 1.22795 0.77236 1.05803 1.03595 1.47704 1.08426 1.04474 1.71675 1.17660 0.86215 0.83820 0.75842 1.90779 1.14962 1.87780 1.52216 1.21344 0.96047 0.92863 1.12189 1.21987 0.89562 0.87070 1.02948 1.21056 0.83648 1.03602 0.85294 1.86058 1.20741 1.84421 1.32448 1.19194 0.82427 0.95396 0.95081 1.20628 0.94760 1.05908 0.96914 1.20936 0.92418 0.95717 0.98502 1.20365 0.97006 1.05123 0.93612 1.25130 0.88569 0.94471 1.09735 1.86450 1.69935 1.21090 1.58992 0.93697 0.75959 0.88424 0.74094 1.21024 0.93575 0.96658 0.98090 1.21412 0.96459 1.07553 0.97036 1.83782 1.16219 1.38129 1.69140 1.25055 0.88592 0.92756 1.01244 1.23937 0.93418 0.98109 1.07439 1.22609 0.96798 0.81159 0.98172 0.89650 1.23604 1.03795 0.93969 0.96799 1.22573 0.85613 0.93874 0.95372 0.87975 1.86457 1.30059 1.52137 1.69887 1.24122 1.02959 0.94971 0.98591 0.90535 0.88351 0.88188 0.87997 0.88129 0.85021 0.84267 0.87492 0.75587 1.22506 1.20935 0.83233 0.83478 0.72965 0.77610 0.91984 0.86099 0.74907 0.86245 0.90906 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.35 7.47 127.77 0.96 0.61 16 2 N -0.59 -1.32 3.08 -823.58 -2.54 -3.86 16 3 C 0.57 5.30 7.66 86.65 0.66 5.96 16 4 O -0.58 -9.83 14.51 -4.08 -0.06 -9.89 16 5 C -0.22 -1.18 6.08 -18.99 -0.12 -1.29 16 6 C 0.04 0.24 7.00 25.26 0.18 0.42 16 7 C 0.14 0.92 4.65 71.24 0.33 1.25 16 8 O -0.32 -3.70 10.12 -92.44 -0.94 -4.63 16 9 C 0.12 1.17 6.69 22.51 0.15 1.32 16 10 C -0.16 -1.40 9.99 22.37 0.22 -1.17 16 11 C -0.06 -0.35 9.60 22.25 0.21 -0.14 16 12 C -0.16 -0.67 5.39 -19.85 -0.11 -0.78 16 13 C -0.07 -0.16 2.82 71.24 0.20 0.04 16 14 O -0.56 -1.77 12.77 -148.98 -1.90 -3.67 16 15 Si 0.77 0.03 29.78 68.60 2.04 2.07 16 16 C -0.08 -0.23 8.66 22.26 0.19 -0.04 16 17 C -0.21 -1.09 9.04 22.36 0.20 -0.89 16 18 O -0.18 -0.58 10.52 4.52 0.05 -0.54 16 19 C -0.01 0.05 12.03 66.89 0.80 0.85 16 20 C -0.21 0.69 8.86 23.65 0.21 0.90 16 21 C 0.12 0.36 4.14 45.52 0.19 0.55 16 22 H 0.09 0.96 7.22 -2.39 -0.02 0.94 16 23 C -0.14 0.10 7.42 31.12 0.23 0.33 16 24 C 0.09 -0.27 5.28 31.12 0.16 -0.10 16 25 H 0.10 -0.84 8.14 -2.38 -0.02 -0.86 16 26 O -0.58 -0.58 13.59 -148.98 -2.02 -2.60 16 27 C -0.17 0.55 7.31 31.12 0.23 0.78 16 28 H 0.08 -0.75 7.67 -2.39 -0.02 -0.77 16 29 H 0.10 -1.16 6.09 -2.39 -0.01 -1.18 16 30 H 0.10 -0.92 4.82 -2.38 -0.01 -0.93 16 31 H 0.10 0.79 6.27 -2.39 -0.02 0.77 16 32 H 0.10 0.15 7.66 -2.38 -0.02 0.14 16 33 H 0.13 0.98 8.06 -2.91 -0.02 0.96 16 34 H 0.14 0.57 8.06 -2.91 -0.02 0.54 16 35 H 0.11 0.33 7.96 -2.39 -0.02 0.31 16 36 H 0.39 -1.69 8.70 -74.06 -0.64 -2.33 16 37 H -0.30 -2.12 7.11 99.48 0.71 -1.41 16 38 H -0.28 -1.16 7.11 99.48 0.71 -0.45 16 39 H 0.15 -0.31 4.87 -2.91 -0.01 -0.32 16 40 H 0.15 0.16 6.30 -2.91 -0.02 0.15 16 41 H 0.25 -3.51 8.06 -2.91 -0.02 -3.54 16 42 H 0.21 -2.17 4.91 -2.91 -0.01 -2.19 16 43 H 0.06 0.23 8.14 -2.38 -0.02 0.21 16 44 H 0.12 -0.70 7.02 -2.39 -0.02 -0.72 16 45 H 0.40 -3.10 9.12 -74.06 -0.68 -3.78 16 46 H 0.12 -0.99 6.57 -2.39 -0.02 -1.01 16 47 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 Total: 0.00 -29.41 382.48 -0.68 -30.10 By element: Atomic # 1 Polarization: -15.34 SS G_CDS: -0.23 Total: -15.57 kcal Atomic # 6 Polarization: 3.69 SS G_CDS: 4.91 Total: 8.60 kcal Atomic # 7 Polarization: -1.32 SS G_CDS: -2.54 Total: -3.86 kcal Atomic # 8 Polarization: -16.46 SS G_CDS: -4.87 Total: -21.34 kcal Atomic # 14 Polarization: 0.03 SS G_CDS: 2.04 Total: 2.07 kcal Total: -29.41 -0.68 -30.10 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16982422_4549634.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.090 kcal (2) G-P(sol) polarization free energy of solvation -29.412 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.502 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.684 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.096 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.186 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds