Wall clock time and date at job start Tue Mar 9 2021 15:37:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35992 * 116.99792 * 2 1 4 4 C 1.38673 * 119.99678 * 180.02562 * 3 2 1 5 5 C 1.38156 * 119.99800 * 180.02562 * 4 3 2 6 6 C 1.50699 * 119.99992 * 180.02562 * 5 4 3 7 7 O 1.42902 * 109.47139 * 254.97701 * 6 5 4 8 8 Si 1.86289 * 109.47186 * 14.97979 * 6 5 4 9 9 C 1.38680 * 119.99670 * 359.97438 * 5 4 3 10 10 O 1.35986 * 119.99489 * 179.97438 * 9 5 4 11 11 C 1.42905 * 116.99440 * 179.97438 * 10 9 5 12 12 C 1.50703 * 109.46617 * 180.02562 * 11 10 9 13 13 O 1.21272 * 120.00335 * 0.02562 * 12 11 10 14 14 N 1.34785 * 119.99642 * 180.02562 * 12 11 10 15 15 C 1.46501 * 119.99811 * 0.02562 * 14 12 11 16 16 C 1.46501 * 119.99740 * 179.97438 * 14 12 11 17 17 H 1.08995 * 112.85048 * 4.06385 * 16 14 12 18 18 C 1.53776 * 113.68665 * 135.33002 * 16 14 12 19 19 C 1.53772 * 87.08247 * 89.12588 * 18 16 14 20 20 H 1.08994 * 113.61962 * 270.88101 * 19 18 16 21 21 O 1.42904 * 113.69208 * 139.99076 * 19 18 16 22 22 C 1.53779 * 113.61379 * 232.86552 * 16 14 12 23 23 C 1.38715 * 120.00354 * 0.27823 * 9 5 4 24 24 C 1.38118 * 119.99437 * 359.44461 * 23 9 5 25 25 H 1.09005 * 109.47114 * 179.97438 * 1 2 3 26 26 H 1.08997 * 109.47477 * 300.00053 * 1 2 3 27 27 H 1.09001 * 109.47104 * 60.00473 * 1 2 3 28 28 H 1.07993 * 120.00542 * 0.04038 * 4 3 2 29 29 H 1.08999 * 109.46719 * 134.97998 * 6 5 4 30 30 H 0.96702 * 113.99594 * 300.00255 * 7 6 5 31 31 H 1.48504 * 110.00165 * 59.99888 * 8 6 5 32 32 H 1.48505 * 110.00318 * 181.31641 * 8 6 5 33 33 H 1.09000 * 109.46689 * 60.00708 * 11 10 9 34 34 H 1.08998 * 109.47492 * 300.00672 * 11 10 9 35 35 H 1.09007 * 109.46794 * 263.95988 * 15 14 12 36 36 H 1.08993 * 109.47566 * 23.96470 * 15 14 12 37 37 H 1.08999 * 109.46812 * 143.97073 * 15 14 12 38 38 H 1.09000 * 113.61360 * 203.67855 * 18 16 14 39 39 H 1.09003 * 113.61501 * 334.57605 * 18 16 14 40 40 H 0.96693 * 114.00056 * 82.46179 * 21 19 18 41 41 H 1.08993 * 113.61837 * 25.34834 * 22 16 14 42 42 H 1.08998 * 113.61580 * 156.17276 * 22 16 14 43 43 H 1.07996 * 120.00458 * 179.70187 * 23 9 5 44 44 H 1.08000 * 119.99508 * 180.25794 * 24 23 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 3.4312 1.2843 -0.0005 5 6 4.0584 2.5153 0.0000 6 6 5.5633 2.5941 -0.0012 7 8 6.0218 2.9667 1.3000 8 14 6.2719 0.9327 -0.4571 9 6 3.3030 3.6783 0.0005 10 8 3.9204 4.8899 0.0016 11 6 3.0803 6.0460 0.0015 12 6 3.9345 7.2875 0.0021 13 8 5.1435 7.1918 0.0021 14 7 3.3548 8.5043 0.0027 15 6 1.8944 8.6199 0.0033 16 6 4.1852 9.7113 0.0039 17 1 5.2505 9.4921 -0.0670 18 6 3.7107 10.7885 -0.9856 19 6 2.8274 11.3310 0.1502 20 1 1.8374 10.8765 0.1885 21 8 2.7856 12.7580 0.2136 22 6 3.8331 10.7001 1.1277 23 6 1.9177 3.6057 0.0064 24 6 1.2908 2.3750 0.0000 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3634 0.5138 0.8899 27 1 -0.3633 0.5138 -0.8900 28 1 4.0194 0.3786 -0.0016 29 1 5.8874 3.3392 -0.7277 30 1 5.6913 3.8235 1.6030 31 1 5.8025 0.5339 -1.8084 32 1 7.7556 0.9887 -0.4309 33 1 2.4505 6.0374 0.8911 34 1 2.4516 6.0383 -0.8888 35 1 1.5403 8.7566 -1.0186 36 1 1.4582 7.7123 0.4206 37 1 1.5980 9.4768 0.6081 38 1 4.4983 11.4765 -1.2928 39 1 3.1440 10.3895 -1.8269 40 1 2.1549 13.1606 -0.3989 41 1 3.3652 10.2298 1.9924 42 1 4.6546 11.3630 1.3992 43 1 1.3295 4.5113 0.0117 44 1 0.2123 2.3185 0.0004 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16982422_4974302.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:37:40 Heat of formation + Delta-G solvation = -110.843671 kcal Electronic energy + Delta-G solvation = -27910.010650 eV Core-core repulsion = 23796.965101 eV Total energy + Delta-G solvation = -4113.045549 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -42.03444 -41.53190 -40.26554 -39.48619 -38.12734 -36.96200 -36.73632 -34.73327 -32.82498 -31.05800 -29.52066 -28.51750 -27.96511 -26.87379 -26.60779 -25.03665 -23.60114 -22.41763 -21.61875 -19.95347 -19.58847 -19.00835 -18.71153 -18.27675 -17.98173 -17.67814 -17.45057 -17.03570 -16.63692 -16.22530 -16.09142 -15.91282 -15.63639 -15.47334 -15.27969 -14.86824 -14.45424 -14.40101 -14.14952 -14.06622 -13.62737 -13.56260 -13.46665 -13.38697 -13.28693 -13.02690 -12.63637 -12.53037 -12.46220 -12.31179 -12.03880 -11.49030 -11.46081 -11.32107 -11.24654 -10.99918 -10.71820 -10.10929 -9.85330 -8.83774 -4.94863 0.05392 0.32010 1.27045 1.29256 1.32302 1.56570 1.90432 2.29244 2.39475 2.53709 3.20084 3.25439 3.39207 3.51360 3.54472 3.70709 3.76481 3.80033 3.84739 3.87603 3.96892 4.07804 4.10237 4.12097 4.19665 4.26408 4.44392 4.45240 4.45627 4.58682 4.65467 4.66832 4.70305 4.76523 4.80151 4.85863 4.90795 4.96085 5.03712 5.11006 5.19601 5.38896 5.45938 6.03202 6.19857 6.43690 6.49244 6.86910 6.90094 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.333 6.333 3 C 0.091 3.909 4 C -0.119 4.119 5 C -0.119 4.119 6 C -0.083 4.083 7 O -0.545 6.545 8 Si 0.812 3.188 9 C 0.088 3.912 10 O -0.318 6.318 11 C 0.043 3.957 12 C 0.512 3.488 13 O -0.571 6.571 14 N -0.590 5.590 15 C 0.044 3.956 16 C 0.112 3.888 17 H 0.086 0.914 18 C -0.169 4.169 19 C 0.075 3.925 20 H 0.120 0.880 21 O -0.581 6.581 22 C -0.142 4.142 23 C -0.158 4.158 24 C -0.160 4.160 25 H 0.114 0.886 26 H 0.068 0.932 27 H 0.066 0.934 28 H 0.152 0.848 29 H 0.060 0.940 30 H 0.371 0.629 31 H -0.263 1.263 32 H -0.295 1.295 33 H 0.128 0.872 34 H 0.124 0.876 35 H 0.083 0.917 36 H 0.102 0.898 37 H 0.095 0.905 38 H 0.093 0.907 39 H 0.087 0.913 40 H 0.397 0.603 41 H 0.084 0.916 42 H 0.090 0.910 43 H 0.168 0.832 44 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.918 1.390 -0.660 13.010 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.247 6.247 3 C 0.046 3.954 4 C -0.137 4.137 5 C -0.120 4.120 6 C -0.190 4.190 7 O -0.351 6.351 8 Si 0.713 3.287 9 C 0.043 3.957 10 O -0.232 6.232 11 C -0.035 4.035 12 C 0.300 3.700 13 O -0.449 6.449 14 N -0.323 5.323 15 C -0.096 4.096 16 C 0.008 3.992 17 H 0.104 0.896 18 C -0.208 4.208 19 C 0.017 3.983 20 H 0.137 0.863 21 O -0.390 6.390 22 C -0.181 4.181 23 C -0.177 4.177 24 C -0.179 4.179 25 H 0.132 0.868 26 H 0.087 0.913 27 H 0.085 0.915 28 H 0.169 0.831 29 H 0.078 0.922 30 H 0.220 0.780 31 H -0.189 1.189 32 H -0.222 1.222 33 H 0.145 0.855 34 H 0.141 0.859 35 H 0.101 0.899 36 H 0.121 0.879 37 H 0.114 0.886 38 H 0.111 0.889 39 H 0.105 0.895 40 H 0.247 0.753 41 H 0.102 0.898 42 H 0.108 0.892 43 H 0.186 0.814 44 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -10.790 0.095 -0.811 10.821 hybrid contribution -0.570 2.170 -0.802 2.382 sum -11.360 2.265 -1.613 11.695 Atomic orbital electron populations 1.23360 0.76351 1.05616 1.02404 1.86093 1.23420 1.26285 1.88908 1.18976 0.91900 0.85407 0.99096 1.20178 0.92493 0.96728 1.04252 1.19449 0.95956 0.91044 1.05526 1.25531 0.92952 1.12533 0.87969 1.86661 1.74194 1.42225 1.32036 0.92225 0.76210 0.78968 0.81275 1.18808 0.91835 0.84101 1.00920 1.86087 1.35638 1.11991 1.89491 1.22749 0.92422 0.81651 1.06677 1.20636 0.88238 0.85266 0.75837 1.90758 1.16812 1.86997 1.50317 1.47480 1.08561 1.03696 1.72555 1.22602 0.76603 1.05882 1.04523 1.21687 0.95778 0.83792 0.97987 0.89570 1.23991 1.01300 0.97289 0.98230 1.23923 0.98556 0.80903 0.94894 0.86329 1.86502 1.66765 1.19818 1.65910 1.23487 1.00147 0.96864 0.97584 1.21367 0.91919 1.00081 1.04299 1.21428 1.01646 0.90850 1.03963 0.86791 0.91345 0.91499 0.83076 0.92199 0.78040 1.18877 1.22247 0.85462 0.85891 0.89855 0.87945 0.88649 0.88869 0.89479 0.75259 0.89764 0.89154 0.81429 0.81957 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 2 O -0.33 -0.54 10.50 -93.46 -0.98 -1.52 16 3 C 0.09 0.20 6.68 22.49 0.15 0.35 16 4 C -0.12 -0.50 8.59 22.35 0.19 -0.31 16 5 C -0.12 -0.72 5.28 -19.78 -0.10 -0.82 16 6 C -0.08 -0.71 2.33 71.24 0.17 -0.54 16 7 O -0.54 -5.68 12.65 -148.98 -1.89 -7.57 16 8 Si 0.81 4.53 30.17 68.60 2.07 6.60 16 9 C 0.09 0.29 6.62 22.49 0.15 0.44 16 10 O -0.32 -1.56 8.56 -74.35 -0.64 -2.20 16 11 C 0.04 -0.16 3.69 71.24 0.26 0.10 16 12 C 0.51 1.72 7.75 87.66 0.68 2.40 16 13 O -0.57 -8.58 15.95 16.03 0.26 -8.32 16 14 N -0.59 1.64 3.09 -819.65 -2.53 -0.89 16 15 C 0.04 -0.56 9.00 127.77 1.15 0.59 16 16 C 0.11 0.04 4.49 45.52 0.20 0.25 16 17 H 0.09 0.59 7.17 -2.39 -0.02 0.57 16 18 C -0.17 0.56 7.33 31.12 0.23 0.79 16 19 C 0.08 -0.38 4.56 31.12 0.14 -0.24 16 20 H 0.12 -1.29 5.09 -2.39 -0.01 -1.31 16 21 O -0.58 1.02 13.67 -148.98 -2.04 -1.02 16 22 C -0.14 0.17 7.28 31.12 0.23 0.40 16 23 C -0.16 0.49 9.03 22.36 0.20 0.69 16 24 C -0.16 0.42 9.03 22.35 0.20 0.63 16 25 H 0.11 -1.02 8.14 -2.38 -0.02 -1.03 16 26 H 0.07 -0.60 7.66 -2.39 -0.02 -0.62 16 27 H 0.07 -0.58 7.66 -2.39 -0.02 -0.60 16 28 H 0.15 0.23 5.13 -2.91 -0.01 0.22 16 29 H 0.06 0.68 7.82 -2.39 -0.02 0.66 16 30 H 0.37 2.99 8.60 -74.06 -0.64 2.36 16 31 H -0.26 -1.93 7.11 99.48 0.71 -1.23 16 32 H -0.29 -3.54 7.11 99.48 0.71 -2.84 16 33 H 0.13 -1.35 6.93 -2.39 -0.02 -1.37 16 34 H 0.12 -1.22 7.64 -2.39 -0.02 -1.24 16 35 H 0.08 -1.26 8.14 -2.38 -0.02 -1.28 16 36 H 0.10 -1.78 6.23 -2.39 -0.01 -1.79 16 37 H 0.10 -1.35 4.88 -2.39 -0.01 -1.36 16 38 H 0.09 -0.11 8.14 -2.39 -0.02 -0.12 16 39 H 0.09 -0.49 8.10 -2.39 -0.02 -0.51 16 40 H 0.40 -4.09 9.12 -74.06 -0.68 -4.76 16 41 H 0.08 -0.21 8.13 -2.39 -0.02 -0.23 16 42 H 0.09 0.14 8.14 -2.39 -0.02 0.12 16 43 H 0.17 -1.87 6.29 -2.91 -0.02 -1.89 16 44 H 0.16 -1.41 6.29 -2.91 -0.02 -1.43 16 Total: 0.00 -27.88 355.57 -1.00 -28.88 By element: Atomic # 1 Polarization: -19.47 SS G_CDS: -0.21 Total: -19.68 kcal Atomic # 6 Polarization: 0.77 SS G_CDS: 4.96 Total: 5.73 kcal Atomic # 7 Polarization: 1.64 SS G_CDS: -2.53 Total: -0.89 kcal Atomic # 8 Polarization: -15.35 SS G_CDS: -5.28 Total: -20.63 kcal Atomic # 14 Polarization: 4.53 SS G_CDS: 2.07 Total: 6.60 kcal Total: -27.88 -1.00 -28.88 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16982422_4974302.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -81.962 kcal (2) G-P(sol) polarization free energy of solvation -27.884 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -109.846 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.998 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.881 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.844 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds