Wall clock time and date at job start Tue Mar 9 2021 15:37:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35904 * 116.99628 * 2 1 4 4 C 1.38610 * 120.02387 * 179.97438 * 3 2 1 5 5 C 1.38661 * 119.88855 * 180.02562 * 4 3 2 6 6 O 1.35898 * 120.02492 * 179.97438 * 5 4 3 7 7 C 1.42894 * 117.00207 * 0.02562 * 6 5 4 8 8 C 1.50705 * 109.47393 * 180.02562 * 7 6 5 9 9 O 1.21281 * 119.99567 * 359.97438 * 8 7 6 10 10 N 1.34775 * 120.00150 * 179.97438 * 8 7 6 11 11 C 1.46496 * 119.99954 * 359.97438 * 10 8 7 12 12 C 1.46499 * 119.99739 * 179.97438 * 10 8 7 13 13 H 1.08994 * 112.85148 * 11.19443 * 12 10 8 14 14 C 1.53781 * 113.61193 * 142.50313 * 12 10 8 15 15 C 1.53783 * 87.08324 * 89.11834 * 14 12 10 16 16 H 1.09001 * 113.60967 * 270.88203 * 15 14 12 17 17 O 1.42893 * 113.69201 * 139.99419 * 15 14 12 18 18 C 1.53782 * 113.61442 * 239.99926 * 12 10 8 19 19 C 1.38746 * 119.94318 * 0.02562 * 5 4 3 20 20 C 1.50704 * 119.97002 * 179.97438 * 19 5 4 21 21 O 1.42902 * 109.46780 * 75.00641 * 20 19 5 22 22 Si 1.86301 * 109.47284 * 195.00157 * 20 19 5 23 23 C 1.38191 * 120.06007 * 0.02562 * 19 5 4 24 24 C 1.38156 * 120.10512 * 359.67029 * 23 19 5 25 25 H 1.09002 * 109.47382 * 59.99787 * 1 2 3 26 26 H 1.09001 * 109.46938 * 299.99774 * 1 2 3 27 27 H 1.09004 * 109.46926 * 179.97438 * 1 2 3 28 28 H 1.08005 * 120.05919 * 0.03279 * 4 3 2 29 29 H 1.09004 * 109.46953 * 299.99863 * 7 6 5 30 30 H 1.09000 * 109.47782 * 59.99489 * 7 6 5 31 31 H 1.09000 * 109.47316 * 90.00573 * 11 10 8 32 32 H 1.09003 * 109.47210 * 210.00021 * 11 10 8 33 33 H 1.08994 * 109.47283 * 330.00004 * 11 10 8 34 34 H 1.09005 * 113.61305 * 203.66582 * 14 12 10 35 35 H 1.09000 * 113.61432 * 334.56631 * 14 12 10 36 36 H 0.96705 * 114.00315 * 82.46537 * 17 15 14 37 37 H 1.09003 * 113.61235 * 25.43180 * 18 12 10 38 38 H 1.08999 * 113.61514 * 156.34020 * 18 12 10 39 39 H 1.08993 * 109.47418 * 315.00716 * 20 19 5 40 40 H 0.96700 * 114.00284 * 180.02562 * 21 20 19 41 41 H 1.48501 * 109.99846 * 300.00555 * 22 20 19 42 42 H 1.48501 * 109.99627 * 61.32347 * 22 20 19 43 43 H 1.07997 * 119.95090 * 179.97438 * 23 19 5 44 44 H 1.08002 * 119.97459 * 180.30130 * 24 23 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2110 0.0000 4 6 3.4301 1.2842 0.0005 5 6 4.0566 2.5212 0.0011 6 8 5.4135 2.5962 0.0021 7 6 6.1316 1.3607 0.0021 8 6 7.6125 1.6404 0.0039 9 8 8.0134 2.7850 0.0047 10 7 8.4912 0.6185 0.0047 11 6 8.0068 -0.7641 0.0043 12 6 9.9307 0.8904 0.0060 13 1 10.1636 1.9371 0.2012 14 6 10.7427 -0.0938 0.8644 15 6 10.8561 -0.9737 -0.3917 16 1 10.0380 -1.6856 -0.5013 17 8 12.1414 -1.5757 -0.5569 18 6 10.6679 0.3124 -1.2136 19 6 3.2970 3.6822 0.0016 20 6 3.9773 5.0270 0.0028 21 8 4.5037 5.2955 -1.2983 22 14 2.7436 6.3467 0.4579 23 6 1.9171 3.6066 0.0021 24 6 1.2906 2.3753 -0.0047 25 1 -0.3634 0.5139 -0.8900 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 4.0197 0.3792 0.0004 29 1 5.8692 0.7880 0.8916 30 1 5.8706 0.7887 -0.8883 31 1 7.8877 -1.1071 -1.0234 32 1 8.7262 -1.4013 0.5188 33 1 7.0464 -0.8128 0.5173 34 1 11.6976 0.3078 1.2039 35 1 10.1654 -0.5517 1.6677 36 1 12.2657 -2.3851 -0.0424 37 1 10.0301 0.1824 -2.0880 38 1 11.6023 0.8250 -1.4423 39 1 4.7895 5.0226 0.7296 40 1 4.9569 6.1466 -1.3713 41 1 1.6310 6.3627 -0.5256 42 1 2.2122 6.0965 1.8218 43 1 1.3276 4.5115 0.0030 44 1 0.2120 2.3187 -0.0092 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16982422_4974312.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:37:44 Heat of formation + Delta-G solvation = -103.603178 kcal Electronic energy + Delta-G solvation = -27985.564574 eV Core-core repulsion = 23872.832997 eV Total energy + Delta-G solvation = -4112.731578 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -41.99565 -41.52429 -40.26270 -39.40676 -38.07712 -36.91474 -36.72481 -34.73592 -32.38709 -31.45013 -29.55658 -28.69511 -28.52553 -26.89613 -25.99676 -25.06738 -23.61967 -22.33709 -21.63656 -20.00940 -19.80122 -18.98376 -18.23394 -18.18800 -17.89595 -17.58641 -17.29647 -16.96952 -16.79903 -16.77233 -16.20200 -15.97096 -15.60331 -15.41322 -15.20498 -15.01616 -14.46233 -14.35770 -13.96840 -13.91433 -13.76052 -13.64034 -13.44458 -13.38589 -13.29269 -13.13631 -12.69995 -12.62884 -12.49355 -12.42288 -11.91953 -11.77279 -11.66585 -11.52456 -10.92985 -10.79067 -10.07423 -9.86462 -9.71874 -9.09335 -4.89992 0.18328 0.31415 1.26381 1.38902 1.41382 1.70263 2.01663 2.09790 2.33968 2.54732 3.11679 3.18551 3.37203 3.48905 3.56369 3.63069 3.66691 3.70352 3.79552 3.82202 3.86980 3.94550 3.98488 4.09060 4.12510 4.20042 4.27831 4.31827 4.34416 4.40322 4.43987 4.49977 4.63882 4.65408 4.69304 4.72647 4.86134 4.96024 5.00583 5.19582 5.27433 5.38855 5.44607 6.02724 6.15283 6.31240 6.58892 6.86240 6.98356 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.314 6.314 3 C 0.175 3.825 4 C -0.246 4.246 5 C 0.194 3.806 6 O -0.272 6.272 7 C 0.039 3.961 8 C 0.522 3.478 9 O -0.505 6.505 10 N -0.599 5.599 11 C 0.059 3.941 12 C 0.121 3.879 13 H 0.118 0.882 14 C -0.177 4.177 15 C 0.068 3.932 16 H 0.088 0.912 17 O -0.558 6.558 18 C -0.139 4.139 19 C -0.138 4.138 20 C -0.056 4.056 21 O -0.542 6.542 22 Si 0.681 3.319 23 C -0.043 4.043 24 C -0.238 4.238 25 H 0.059 0.941 26 H 0.059 0.941 27 H 0.104 0.896 28 H 0.140 0.860 29 H 0.096 0.904 30 H 0.097 0.903 31 H 0.065 0.935 32 H 0.084 0.916 33 H 0.075 0.925 34 H 0.105 0.895 35 H 0.076 0.924 36 H 0.380 0.620 37 H 0.078 0.922 38 H 0.104 0.896 39 H 0.074 0.926 40 H 0.379 0.621 41 H -0.251 1.251 42 H -0.255 1.255 43 H 0.132 0.868 44 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.593 -3.685 2.078 4.520 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.226 6.226 3 C 0.129 3.871 4 C -0.265 4.265 5 C 0.147 3.853 6 O -0.183 6.183 7 C -0.039 4.039 8 C 0.308 3.692 9 O -0.378 6.378 10 N -0.334 5.334 11 C -0.084 4.084 12 C 0.018 3.982 13 H 0.136 0.864 14 C -0.216 4.216 15 C 0.009 3.991 16 H 0.105 0.895 17 O -0.363 6.363 18 C -0.177 4.177 19 C -0.139 4.139 20 C -0.167 4.167 21 O -0.348 6.348 22 Si 0.583 3.417 23 C -0.061 4.061 24 C -0.257 4.257 25 H 0.078 0.922 26 H 0.077 0.923 27 H 0.122 0.878 28 H 0.157 0.843 29 H 0.114 0.886 30 H 0.115 0.885 31 H 0.084 0.916 32 H 0.103 0.897 33 H 0.094 0.906 34 H 0.123 0.877 35 H 0.095 0.905 36 H 0.227 0.773 37 H 0.097 0.903 38 H 0.122 0.878 39 H 0.092 0.908 40 H 0.227 0.773 41 H -0.176 1.176 42 H -0.180 1.180 43 H 0.149 0.851 44 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -2.196 -2.976 1.792 4.110 hybrid contribution -0.328 -1.433 0.387 1.520 sum -2.524 -4.409 2.178 5.528 Atomic orbital electron populations 1.23154 0.77591 1.04455 1.01779 1.86072 1.22030 1.26515 1.88020 1.18647 0.91445 0.84326 0.92728 1.20371 0.92892 0.97248 1.15991 1.18345 0.81982 0.92342 0.92614 1.86233 1.14665 1.29683 1.87741 1.22571 0.90205 0.87043 1.04116 1.19959 0.87218 0.85170 0.76821 1.90779 1.79515 1.20537 1.46938 1.47403 1.05476 1.06269 1.74261 1.22155 1.00942 0.82470 1.02785 1.21740 0.78407 1.01268 0.96816 0.86396 1.24096 1.01417 0.98116 0.97954 1.23752 0.85984 0.93606 0.95735 0.89496 1.86551 1.33549 1.44614 1.71633 1.23508 1.01432 0.95216 0.97588 1.18553 0.92136 0.92416 1.10754 1.24439 1.04221 0.98955 0.89108 1.86505 1.76992 1.42583 1.28731 0.95212 0.79702 0.87143 0.79680 1.20613 0.92731 0.97535 0.95173 1.21085 1.00475 0.91665 1.12465 0.92240 0.92270 0.87768 0.84258 0.88647 0.88521 0.91600 0.89709 0.90592 0.87652 0.90523 0.77297 0.90306 0.87797 0.90826 0.77349 1.17610 1.17958 0.85111 0.84713 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 9.81 101.05 0.99 0.95 16 2 O -0.31 -0.56 10.50 -19.44 -0.20 -0.76 16 3 C 0.17 0.46 6.68 -39.24 -0.26 0.20 16 4 C -0.25 -0.60 8.97 -39.29 -0.35 -0.95 16 5 C 0.19 0.76 6.66 -39.24 -0.26 0.50 16 6 O -0.27 -1.16 8.99 -39.33 -0.35 -1.52 16 7 C 0.04 0.02 3.77 36.01 0.14 0.16 16 8 C 0.52 1.29 7.75 -10.98 -0.09 1.21 16 9 O -0.50 -3.47 15.98 -14.35 -0.23 -3.70 16 10 N -0.60 0.21 3.08 -173.01 -0.53 -0.33 16 11 C 0.06 -0.23 8.65 59.84 0.52 0.29 16 12 C 0.12 0.01 4.46 -67.12 -0.30 -0.29 16 13 H 0.12 0.22 7.23 -51.93 -0.38 -0.16 16 14 C -0.18 0.28 7.13 -25.92 -0.18 0.10 16 15 C 0.07 -0.10 4.54 -25.92 -0.12 -0.22 16 16 H 0.09 -0.29 5.55 -51.93 -0.29 -0.58 16 17 O -0.56 0.06 13.67 -35.23 -0.48 -0.42 16 18 C -0.14 0.02 7.58 -25.92 -0.20 -0.17 16 19 C -0.14 -0.58 5.31 -104.45 -0.55 -1.13 16 20 C -0.06 -0.15 2.37 36.01 0.09 -0.07 16 21 O -0.54 -1.78 12.86 -35.23 -0.45 -2.24 16 22 Si 0.68 0.27 30.19 -169.99 -5.13 -4.86 16 23 C -0.04 -0.14 8.65 -39.63 -0.34 -0.48 16 24 C -0.24 -0.53 9.04 -39.41 -0.36 -0.89 16 25 H 0.06 -0.13 7.65 -51.93 -0.40 -0.53 16 26 H 0.06 -0.14 7.67 -51.93 -0.40 -0.54 16 27 H 0.10 -0.34 8.14 -51.93 -0.42 -0.77 16 28 H 0.14 -0.01 6.30 -52.48 -0.33 -0.34 16 29 H 0.10 -0.20 6.92 -51.93 -0.36 -0.56 16 30 H 0.10 -0.14 7.63 -51.93 -0.40 -0.54 16 31 H 0.07 -0.30 8.14 -51.93 -0.42 -0.72 16 32 H 0.08 -0.42 4.83 -51.93 -0.25 -0.67 16 33 H 0.08 -0.41 6.44 -51.93 -0.33 -0.74 16 34 H 0.11 -0.13 8.14 -51.93 -0.42 -0.55 16 35 H 0.08 -0.19 7.36 -51.93 -0.38 -0.57 16 36 H 0.38 -1.60 9.12 45.56 0.42 -1.18 16 37 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 38 H 0.10 0.04 8.14 -51.93 -0.42 -0.38 16 39 H 0.07 0.19 7.82 -51.93 -0.41 -0.21 16 40 H 0.38 -0.58 8.74 45.56 0.40 -0.18 16 41 H -0.25 -0.65 6.75 56.52 0.38 -0.27 16 42 H -0.25 -0.66 7.11 56.52 0.40 -0.26 16 43 H 0.13 0.30 4.89 -52.49 -0.26 0.04 16 44 H 0.14 -0.01 6.29 -52.49 -0.33 -0.34 16 LS Contribution 355.64 15.07 5.36 5.36 Total: 0.00 -11.39 355.64 -8.33 -19.73 By element: Atomic # 1 Polarization: -5.44 SS G_CDS: -5.02 Total: -10.47 kcal Atomic # 6 Polarization: 0.49 SS G_CDS: -1.28 Total: -0.79 kcal Atomic # 7 Polarization: 0.21 SS G_CDS: -0.53 Total: -0.33 kcal Atomic # 8 Polarization: -6.91 SS G_CDS: -1.72 Total: -8.63 kcal Atomic # 14 Polarization: 0.27 SS G_CDS: -5.13 Total: -4.86 kcal Total LS contribution 5.36 Total: 5.36 kcal Total: -11.39 -8.33 -19.73 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16982422_4974312.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.877 kcal (2) G-P(sol) polarization free energy of solvation -11.392 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.269 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.334 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.726 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.603 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds