Wall clock time and date at job start Tue Mar 9 2021 15:37:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.35992 * 117.00156 * 2 1 4 4 C 1.39154 * 120.07490 * 180.02562 * 3 2 1 5 5 O 1.35989 * 120.07274 * 359.94795 * 4 3 2 6 6 C 1.42904 * 117.00361 * 180.02562 * 5 4 3 7 7 C 1.50693 * 109.47129 * 180.02562 * 6 5 4 8 8 O 1.21279 * 120.00400 * 359.97438 * 7 6 5 9 9 N 1.34781 * 119.99671 * 180.02562 * 7 6 5 10 10 C 1.46495 * 120.00133 * 0.02562 * 9 7 6 11 11 C 1.46498 * 120.00013 * 179.97438 * 9 7 6 12 12 H 1.09002 * 112.84968 * 16.25739 * 11 9 7 13 13 C 1.53775 * 113.61628 * 147.45556 * 11 9 7 14 14 C 1.54053 * 86.98599 * 89.16379 * 13 11 9 15 15 H 1.09002 * 113.69076 * 270.87220 * 14 13 11 16 16 O 1.42900 * 113.62115 * 139.98075 * 14 13 11 17 17 C 1.53777 * 87.07705 * 25.43417 * 14 13 11 18 18 C 1.38562 * 119.85516 * 179.97438 * 4 3 2 19 19 C 1.38251 * 120.00006 * 359.74204 * 18 4 3 20 20 C 1.38253 * 120.14340 * 0.50951 * 19 18 4 21 21 C 1.50697 * 119.92524 * 179.76899 * 20 19 18 22 22 O 1.42905 * 109.47242 * 119.72636 * 21 20 19 23 23 Si 1.86300 * 109.47049 * 359.72290 * 21 20 19 24 24 C 1.38243 * 120.14769 * 359.49205 * 20 19 18 25 25 H 1.09003 * 109.46857 * 60.00121 * 1 2 3 26 26 H 1.08999 * 109.46640 * 180.02562 * 1 2 3 27 27 H 1.09000 * 109.46798 * 299.99972 * 1 2 3 28 28 H 1.09002 * 109.46758 * 300.00902 * 6 5 4 29 29 H 1.08998 * 109.46259 * 60.00147 * 6 5 4 30 30 H 1.09000 * 109.47919 * 95.29755 * 10 9 7 31 31 H 1.09002 * 109.46933 * 215.30098 * 10 9 7 32 32 H 1.09007 * 109.47184 * 335.29596 * 10 9 7 33 33 H 1.09000 * 113.61727 * 203.66735 * 13 11 9 34 34 H 1.09004 * 113.61564 * 334.56906 * 13 11 9 35 35 H 0.96701 * 113.99636 * 82.50351 * 16 14 13 36 36 H 1.08998 * 113.61451 * 220.02631 * 17 14 13 37 37 H 1.08995 * 113.61983 * 89.11721 * 17 14 13 38 38 H 1.07997 * 120.00507 * 179.97438 * 18 4 3 39 39 H 1.07998 * 119.92935 * 180.26024 * 19 18 4 40 40 H 1.08998 * 109.46994 * 239.72194 * 21 20 19 41 41 H 0.96698 * 113.99731 * 299.99657 * 22 21 20 42 42 H 1.48495 * 110.00043 * 58.68424 * 23 21 20 43 43 H 1.48504 * 109.99885 * 180.02562 * 23 21 20 44 44 H 1.07995 * 120.00224 * 180.23506 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0465 1.2117 0.0000 4 6 3.4360 1.2863 -0.0005 5 8 4.1796 0.1477 0.0000 6 6 5.6004 0.3006 0.0000 7 6 6.2519 -1.0583 0.0000 8 8 5.5670 -2.0592 0.0005 9 7 7.5957 -1.1613 0.0005 10 6 8.4231 0.0477 0.0016 11 6 8.2291 -2.4822 0.0010 12 1 7.5427 -3.2809 -0.2802 13 6 9.5667 -2.5244 -0.7564 14 6 10.2399 -2.1422 0.5755 15 1 10.3193 -1.0666 0.7333 16 8 11.4696 -2.8301 0.8136 17 6 9.0307 -2.7806 1.2791 18 6 4.0604 2.5233 -0.0011 19 6 3.3030 3.6798 -0.0065 20 6 1.9225 3.6057 -0.0007 21 6 1.1018 4.8696 -0.0013 22 8 0.2773 4.9017 -1.1682 23 14 2.2367 6.3470 -0.0020 24 6 1.2933 2.3748 -0.0001 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3632 -1.0277 0.0005 27 1 -0.3633 0.5138 0.8900 28 1 5.9066 0.8501 -0.8902 29 1 5.9065 0.8507 0.8897 30 1 8.7062 0.2935 1.0251 31 1 9.3207 -0.1258 -0.5920 32 1 7.8579 0.8751 -0.4277 33 1 9.8360 -3.5189 -1.1122 34 1 9.6560 -1.7594 -1.5278 35 1 12.2338 -2.4333 0.3736 36 1 8.6875 -2.2223 2.1500 37 1 9.1536 -3.8450 1.4789 38 1 5.1386 2.5840 -0.0011 39 1 3.7908 4.6434 -0.0111 40 1 0.4729 4.8949 0.8886 41 1 0.7712 4.8817 -1.9993 42 1 3.1213 6.3074 -1.1941 43 1 1.4394 7.5999 -0.0020 44 1 0.2147 2.3197 0.0006 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16982422_60476.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:37:49 Heat of formation + Delta-G solvation = -105.853572 kcal Electronic energy + Delta-G solvation = -27657.535740 eV Core-core repulsion = 23544.706578 eV Total energy + Delta-G solvation = -4112.829162 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -41.97724 -41.52169 -40.02033 -39.05421 -38.84760 -37.03680 -36.73411 -34.74764 -32.04591 -31.47175 -29.67350 -28.68200 -28.43899 -26.89485 -26.27268 -24.98776 -23.50379 -22.59048 -21.58435 -20.00011 -19.69349 -18.94536 -18.56222 -18.21445 -17.81924 -17.65833 -17.29457 -17.00047 -16.71009 -16.17635 -16.15063 -15.89425 -15.84192 -15.79582 -15.33999 -15.07450 -14.60996 -14.37630 -14.28542 -13.97116 -13.70583 -13.59843 -13.50588 -13.39098 -13.22768 -12.71286 -12.63058 -12.56479 -12.54466 -12.19760 -12.16367 -12.01910 -11.67836 -11.53657 -10.92350 -10.80718 -10.65713 -9.86849 -9.80007 -8.87419 -5.00354 0.15457 0.27936 1.24095 1.27984 1.41991 1.55500 1.92406 2.29380 2.31699 2.54767 3.10849 3.18188 3.31318 3.35863 3.48175 3.59707 3.61171 3.70594 3.74968 3.76972 3.83559 3.86944 3.91121 4.10936 4.15994 4.23606 4.28554 4.32811 4.36405 4.43925 4.51279 4.54963 4.63314 4.64706 4.68459 4.71767 4.86266 4.95854 4.98181 5.07945 5.34753 5.40686 5.54032 5.93250 6.11380 6.36060 6.52744 6.58509 6.99481 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.301 6.301 3 C 0.107 3.893 4 C 0.105 3.895 5 O -0.277 6.277 6 C 0.042 3.958 7 C 0.520 3.480 8 O -0.504 6.504 9 N -0.600 5.600 10 C 0.061 3.939 11 C 0.122 3.878 12 H 0.116 0.884 13 C -0.177 4.177 14 C 0.071 3.929 15 H 0.086 0.914 16 O -0.558 6.558 17 C -0.139 4.139 18 C -0.170 4.170 19 C -0.113 4.113 20 C -0.113 4.113 21 C -0.073 4.073 22 O -0.530 6.530 23 Si 0.686 3.314 24 C -0.146 4.146 25 H 0.056 0.944 26 H 0.103 0.897 27 H 0.056 0.944 28 H 0.094 0.906 29 H 0.096 0.904 30 H 0.065 0.935 31 H 0.081 0.919 32 H 0.077 0.923 33 H 0.105 0.895 34 H 0.077 0.923 35 H 0.379 0.621 36 H 0.078 0.922 37 H 0.103 0.897 38 H 0.138 0.862 39 H 0.133 0.867 40 H 0.119 0.881 41 H 0.376 0.624 42 H -0.259 1.259 43 H -0.257 1.257 44 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.925 4.945 0.330 6.987 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.214 6.214 3 C 0.061 3.939 4 C 0.059 3.941 5 O -0.190 6.190 6 C -0.037 4.037 7 C 0.306 3.694 8 O -0.377 6.377 9 N -0.335 5.335 10 C -0.081 4.081 11 C 0.018 3.982 12 H 0.134 0.866 13 C -0.215 4.215 14 C 0.012 3.988 15 H 0.104 0.896 16 O -0.363 6.363 17 C -0.178 4.178 18 C -0.189 4.189 19 C -0.131 4.131 20 C -0.114 4.114 21 C -0.183 4.183 22 O -0.337 6.337 23 Si 0.587 3.413 24 C -0.165 4.165 25 H 0.075 0.925 26 H 0.121 0.879 27 H 0.075 0.925 28 H 0.112 0.888 29 H 0.113 0.887 30 H 0.084 0.916 31 H 0.099 0.901 32 H 0.095 0.905 33 H 0.123 0.877 34 H 0.096 0.904 35 H 0.227 0.773 36 H 0.097 0.903 37 H 0.121 0.879 38 H 0.156 0.844 39 H 0.150 0.850 40 H 0.136 0.864 41 H 0.224 0.776 42 H -0.184 1.184 43 H -0.182 1.182 44 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 3.923 4.356 0.705 5.904 hybrid contribution 0.070 0.373 -1.433 1.482 sum 3.993 4.728 -0.728 6.232 Atomic orbital electron populations 1.23136 0.78085 1.04427 1.01374 1.86252 1.21359 1.25319 1.88517 1.18286 0.89006 0.85591 1.00990 1.18279 0.88311 0.85739 1.01784 1.86276 1.16048 1.27826 1.88832 1.22523 0.81207 0.96164 1.03824 1.20011 0.81812 0.90663 0.76898 1.90796 1.62055 1.38068 1.46736 1.47422 1.04990 1.06753 1.74375 1.22103 0.96764 0.86531 1.02740 1.21726 0.94233 0.85269 0.96986 0.86596 1.24130 0.95331 1.04063 0.97995 1.23721 0.84117 0.95884 0.95108 0.89637 1.86555 1.17686 1.56524 1.75579 1.23511 0.93408 1.03174 0.97682 1.20974 1.00400 0.90680 1.06806 1.20686 0.92851 0.97867 1.01668 1.19985 0.93703 0.95097 1.02607 1.25015 1.00239 1.01803 0.91196 1.86597 1.35598 1.95712 1.15744 0.94999 0.80394 0.76384 0.89493 1.20941 1.00422 0.90382 1.04751 0.92520 0.87856 0.92493 0.88824 0.88659 0.91612 0.90056 0.90464 0.87653 0.90442 0.77305 0.90333 0.87855 0.84384 0.84990 0.86361 0.77606 1.18430 1.18242 0.84138 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 101.05 0.99 1.00 16 2 O -0.30 -1.32 10.28 -34.22 -0.35 -1.67 16 3 C 0.11 0.35 6.70 -39.12 -0.26 0.09 16 4 C 0.10 0.27 6.70 -39.12 -0.26 0.01 16 5 O -0.28 -1.11 9.45 -47.33 -0.45 -1.56 16 6 C 0.04 -0.01 3.70 36.00 0.13 0.12 16 7 C 0.52 1.18 7.75 -10.99 -0.09 1.09 16 8 O -0.50 -3.68 16.02 -14.35 -0.23 -3.91 16 9 N -0.60 0.42 3.08 -173.00 -0.53 -0.11 16 10 C 0.06 -0.29 8.57 59.84 0.51 0.23 16 11 C 0.12 -0.01 4.40 -67.12 -0.30 -0.30 16 12 H 0.12 0.22 7.31 -51.93 -0.38 -0.16 16 13 C -0.18 0.33 7.14 -25.78 -0.18 0.15 16 14 C 0.07 -0.12 4.58 -25.78 -0.12 -0.24 16 15 H 0.09 -0.31 5.75 -51.93 -0.30 -0.61 16 16 O -0.56 0.17 13.67 -35.23 -0.48 -0.31 16 17 C -0.14 0.04 7.64 -25.92 -0.20 -0.16 16 18 C -0.17 0.09 9.04 -39.46 -0.36 -0.27 16 19 C -0.11 0.10 8.66 -39.57 -0.34 -0.25 16 20 C -0.11 -0.02 5.39 -104.62 -0.56 -0.58 16 21 C -0.07 0.04 2.82 36.00 0.10 0.14 16 22 O -0.53 -0.48 12.77 -35.23 -0.45 -0.93 16 23 Si 0.69 -1.06 29.78 -169.99 -5.06 -6.12 16 24 C -0.15 -0.20 8.60 -39.46 -0.34 -0.54 16 25 H 0.06 -0.04 7.66 -51.93 -0.40 -0.43 16 26 H 0.10 -0.10 8.14 -51.93 -0.42 -0.52 16 27 H 0.06 -0.05 7.66 -51.93 -0.40 -0.45 16 28 H 0.09 -0.30 6.94 -51.93 -0.36 -0.66 16 29 H 0.10 -0.31 7.63 -51.93 -0.40 -0.70 16 30 H 0.07 -0.36 7.87 -51.93 -0.41 -0.77 16 31 H 0.08 -0.45 5.30 -51.93 -0.28 -0.73 16 32 H 0.08 -0.50 6.25 -51.93 -0.32 -0.82 16 33 H 0.11 -0.15 8.14 -51.93 -0.42 -0.57 16 34 H 0.08 -0.22 6.97 -51.93 -0.36 -0.59 16 35 H 0.38 -1.69 9.12 45.56 0.42 -1.27 16 36 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 37 H 0.10 0.04 8.14 -51.93 -0.42 -0.38 16 38 H 0.14 -0.51 6.30 -52.49 -0.33 -0.84 16 39 H 0.13 -0.40 4.87 -52.49 -0.26 -0.66 16 40 H 0.12 -0.15 7.96 -51.93 -0.41 -0.56 16 41 H 0.38 -0.68 8.70 45.56 0.40 -0.29 16 42 H -0.26 -0.05 7.10 56.52 0.40 0.35 16 43 H -0.26 -0.49 7.11 56.52 0.40 -0.09 16 44 H 0.14 0.06 6.30 -52.49 -0.33 -0.27 16 LS Contribution 355.92 15.07 5.36 5.36 Total: 0.00 -11.75 355.92 -8.47 -20.22 By element: Atomic # 1 Polarization: -6.45 SS G_CDS: -5.01 Total: -11.46 kcal Atomic # 6 Polarization: 1.75 SS G_CDS: -1.27 Total: 0.48 kcal Atomic # 7 Polarization: 0.42 SS G_CDS: -0.53 Total: -0.11 kcal Atomic # 8 Polarization: -6.42 SS G_CDS: -1.96 Total: -8.38 kcal Atomic # 14 Polarization: -1.06 SS G_CDS: -5.06 Total: -6.12 kcal Total LS contribution 5.36 Total: 5.36 kcal Total: -11.75 -8.47 -20.22 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16982422_60476.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -85.632 kcal (2) G-P(sol) polarization free energy of solvation -11.754 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -97.386 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.468 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.222 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.854 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds