Wall clock time and date at job start Tue Mar 9 2021 12:52:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 Si 1.86303 * 109.46767 * 2 1 4 4 C 1.86298 * 109.90934 * 303.31542 * 3 2 1 5 5 C 1.52991 * 109.47563 * 296.49928 * 4 3 2 6 6 C 1.87351 * 109.92093 * 64.42960 * 3 2 1 7 7 C 1.53826 * 107.30876 * 72.62757 * 6 3 2 8 8 N 1.46297 * 109.27066 * 53.86436 * 7 6 3 9 9 C 1.34778 * 119.08686 * 107.62537 * 8 7 6 10 10 O 1.21572 * 120.00047 * 2.45439 * 9 8 7 11 11 C 1.47700 * 120.00310 * 182.45609 * 9 8 7 12 12 C 1.39621 * 120.14997 * 28.67898 * 11 9 8 13 13 C 1.38108 * 119.84572 * 179.97438 * 12 11 9 14 14 F 1.35103 * 119.91794 * 180.02562 * 13 12 11 15 15 C 1.38614 * 120.17111 * 0.02562 * 13 12 11 16 16 C 1.50697 * 119.84692 * 179.97438 * 15 13 12 17 17 O 1.42892 * 109.47229 * 285.00212 * 16 15 13 18 18 Si 1.86300 * 109.47288 * 164.99572 * 16 15 13 19 19 H 1.48506 * 109.46760 * 60.00147 * 18 16 15 20 20 H 1.48495 * 109.47208 * 180.02562 * 18 16 15 21 21 H 1.48497 * 109.47209 * 300.00320 * 18 16 15 22 22 C 1.38234 * 120.30867 * 0.02562 * 15 13 12 23 23 C 1.38270 * 120.14874 * 359.70140 * 22 15 13 24 24 F 1.35095 * 120.08165 * 180.29626 * 23 22 15 25 25 C 1.46282 * 121.84432 * 287.71512 * 8 7 6 26 26 C 1.53819 * 109.26958 * 72.28705 * 25 8 7 27 27 H 1.09008 * 109.47185 * 60.93051 * 1 2 3 28 28 H 1.08997 * 109.47228 * 180.92703 * 1 2 3 29 29 H 1.08992 * 109.47318 * 300.92822 * 1 2 3 30 30 H 1.08996 * 109.47012 * 240.00509 * 2 1 3 31 31 H 1.08998 * 109.47334 * 119.99711 * 2 1 3 32 32 H 1.09007 * 109.46637 * 56.50148 * 4 3 2 33 33 H 1.08999 * 109.47017 * 176.49328 * 4 3 2 34 34 H 1.09002 * 109.47454 * 179.07417 * 5 4 3 35 35 H 1.09004 * 109.47252 * 299.07199 * 5 4 3 36 36 H 1.08997 * 109.47126 * 59.07344 * 5 4 3 37 37 H 1.08998 * 109.88752 * 313.17405 * 6 3 2 38 38 H 1.08997 * 109.88717 * 192.07553 * 6 3 2 39 39 H 1.09001 * 109.50900 * 173.81666 * 7 6 3 40 40 H 1.09004 * 109.51201 * 293.91049 * 7 6 3 41 41 H 1.07994 * 120.07695 * 359.95660 * 12 11 9 42 42 H 1.09005 * 109.47113 * 44.99524 * 16 15 13 43 43 H 0.96694 * 114.00513 * 180.02562 * 17 16 15 44 44 H 1.08003 * 119.92361 * 179.97438 * 22 15 13 45 45 H 1.09003 * 109.47061 * 312.35631 * 25 8 7 46 46 H 1.08997 * 109.54816 * 192.25884 * 25 8 7 47 47 H 1.09003 * 109.88995 * 186.68108 * 26 25 8 48 48 H 1.08993 * 109.95433 * 65.62020 * 26 25 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 14 2.1509 1.7565 0.0000 4 6 1.4552 2.6753 -1.4638 5 6 1.9667 2.0370 -2.7567 6 6 1.6468 2.6118 1.5889 7 6 2.5176 2.0321 2.7168 8 7 3.9284 2.1564 2.3500 9 6 4.6921 3.0687 2.9833 10 8 4.2181 3.7432 3.8769 11 6 6.1048 3.2490 2.5918 12 6 6.5090 2.9826 1.2822 13 6 7.8315 3.1538 0.9229 14 9 8.2242 2.8970 -0.3441 15 6 8.7570 3.5886 1.8587 16 6 10.1983 3.7724 1.4588 17 8 10.8252 2.4943 1.3356 18 14 11.0805 4.7743 2.7583 19 1 11.0149 4.0633 4.0604 20 1 12.5005 4.9559 2.3639 21 1 10.4289 6.1026 2.8862 22 6 8.3644 3.8533 3.1574 23 6 7.0426 3.6916 3.5299 24 9 6.6592 3.9565 4.7979 25 6 4.5330 1.3196 1.3137 26 6 4.0233 1.7717 -0.0653 27 1 -0.3634 0.4993 -0.8983 28 1 -0.3633 -1.0275 0.0166 29 1 -0.3633 0.5281 0.8815 30 1 1.8933 -0.5137 -0.8900 31 1 1.8934 -0.5138 0.8900 32 1 0.3666 2.6257 -1.4399 33 1 1.7724 3.7173 -1.4228 34 1 1.5466 2.5643 -3.6132 35 1 3.0543 2.1013 -2.7882 36 1 1.6635 0.9905 -2.7899 37 1 0.5944 2.4185 1.7963 38 1 1.8178 3.6848 1.5027 39 1 2.3314 2.5818 3.6394 40 1 2.2708 0.9805 2.8634 41 1 5.7893 2.6431 0.5521 42 1 10.2464 4.2942 0.5029 43 1 11.7569 2.5360 1.0804 44 1 9.0908 4.1913 3.8816 45 1 4.2570 0.2784 1.4806 46 1 5.6178 1.4192 1.3514 47 1 4.3731 1.0826 -0.8341 48 1 4.3787 2.7791 -0.2813 RHF calculation, no. of doubly occupied orbitals= 64 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17051536_12360598.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:40 Heat of formation + Delta-G solvation = -140.828903 kcal Electronic energy + Delta-G solvation = -31223.188654 eV Core-core repulsion = 26845.774751 eV Total energy + Delta-G solvation = -4377.413903 eV No. of doubly occupied orbitals = 64 Molecular weight (most abundant/longest-lived isotopes) = 357.148 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -50.03008 -49.96126 -41.75484 -39.85515 -37.77069 -37.49360 -34.22670 -33.91725 -32.88688 -32.15875 -31.33656 -30.60907 -27.75247 -24.89867 -24.49577 -24.22006 -23.74283 -23.47004 -22.69895 -20.85874 -19.25185 -18.75730 -18.52994 -18.47584 -17.67132 -17.04854 -16.78116 -16.61431 -16.41836 -16.17091 -15.87239 -15.74372 -15.62834 -15.47682 -15.31250 -15.03602 -14.79183 -14.38950 -14.27292 -14.25567 -14.11873 -13.90700 -13.65364 -13.57332 -13.42701 -13.29796 -13.03161 -12.93470 -12.88738 -12.52101 -12.36619 -12.25523 -12.18718 -12.10670 -11.97293 -11.89132 -11.01201 -10.78604 -10.57469 -10.52975 -10.45864 -10.24499 -9.85082 -9.68286 -0.72077 -0.28988 0.90663 1.28583 1.33831 1.46760 1.50908 1.64742 1.65063 1.74355 1.79733 2.19936 2.38835 2.75967 2.86644 3.05882 3.26710 3.35640 3.56993 3.72960 3.85649 3.89827 4.08246 4.15399 4.21923 4.24646 4.27019 4.28989 4.31359 4.35746 4.37664 4.38928 4.54312 4.61418 4.63657 4.64090 4.69970 4.72639 4.76630 4.89594 4.96603 5.02883 5.05276 5.15457 5.19225 5.23789 5.34372 5.40533 5.45181 5.48181 6.15120 6.37391 7.02444 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.410 4.410 3 Si 1.010 2.990 4 C -0.411 4.411 5 C -0.144 4.144 6 C -0.425 4.425 7 C 0.121 3.879 8 N -0.603 5.603 9 C 0.559 3.441 10 O -0.514 6.514 11 C -0.140 4.140 12 C -0.123 4.123 13 C 0.110 3.890 14 F -0.121 7.121 15 C -0.056 4.056 16 C -0.087 4.087 17 O -0.539 6.539 18 Si 0.943 3.057 19 H -0.242 1.242 20 H -0.247 1.247 21 H -0.242 1.242 22 C -0.140 4.140 23 C 0.156 3.844 24 F -0.109 7.109 25 C 0.084 3.916 26 C -0.442 4.442 27 H 0.056 0.944 28 H 0.054 0.946 29 H 0.055 0.945 30 H 0.076 0.924 31 H 0.074 0.926 32 H 0.076 0.924 33 H 0.073 0.927 34 H 0.053 0.947 35 H 0.055 0.945 36 H 0.055 0.945 37 H 0.089 0.911 38 H 0.080 0.920 39 H 0.098 0.902 40 H 0.078 0.922 41 H 0.184 0.816 42 H 0.086 0.914 43 H 0.386 0.614 44 H 0.154 0.846 45 H 0.085 0.915 46 H 0.107 0.893 47 H 0.097 0.903 48 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.431 -1.923 -4.304 4.926 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C -0.497 4.497 3 Si 1.203 2.797 4 C -0.498 4.498 5 C -0.201 4.201 6 C -0.512 4.512 7 C -0.001 4.001 8 N -0.336 5.336 9 C 0.347 3.653 10 O -0.390 6.390 11 C -0.145 4.145 12 C -0.141 4.141 13 C 0.090 3.910 14 F -0.099 7.099 15 C -0.058 4.058 16 C -0.197 4.197 17 O -0.346 6.346 18 Si 0.764 3.236 19 H -0.166 1.166 20 H -0.170 1.170 21 H -0.165 1.165 22 C -0.159 4.159 23 C 0.136 3.864 24 F -0.087 7.087 25 C -0.038 4.038 26 C -0.527 4.527 27 H 0.075 0.925 28 H 0.073 0.927 29 H 0.074 0.926 30 H 0.095 0.905 31 H 0.092 0.908 32 H 0.095 0.905 33 H 0.092 0.908 34 H 0.072 0.928 35 H 0.074 0.926 36 H 0.074 0.926 37 H 0.108 0.892 38 H 0.099 0.901 39 H 0.116 0.884 40 H 0.096 0.904 41 H 0.201 0.799 42 H 0.104 0.896 43 H 0.234 0.766 44 H 0.171 0.829 45 H 0.103 0.897 46 H 0.125 0.875 47 H 0.116 0.884 48 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges 0.975 -1.302 -3.014 3.425 hybrid contribution 0.381 -0.096 -0.624 0.737 sum 1.356 -1.397 -3.638 4.126 Atomic orbital electron populations 1.21347 0.94894 1.02094 1.01792 1.25997 1.01062 1.17877 1.04726 0.79392 0.65860 0.67688 0.66748 1.25995 1.06268 1.07217 1.10327 1.21343 1.00995 1.00619 0.97137 1.26726 1.03570 1.07604 1.13298 1.21220 0.77892 1.01714 0.99254 1.47827 1.10652 1.36897 1.38211 1.17961 0.84896 0.80432 0.82021 1.90861 1.73372 1.45304 1.29452 1.19842 0.94564 1.06089 0.93965 1.22274 0.96013 0.98851 0.96991 1.17217 0.92247 1.01323 0.80213 1.91563 1.91325 1.91377 1.35650 1.19334 0.94826 0.99151 0.92465 1.24719 0.92916 0.92875 1.09169 1.86497 1.29180 1.26082 1.92803 0.85769 0.80145 0.79075 0.78623 1.16590 1.17048 1.16546 1.20955 0.95137 1.03476 0.96292 1.17412 0.91686 0.97450 0.79885 1.91629 1.91498 1.90468 1.35109 1.22149 1.00363 0.95056 0.86202 1.26902 1.21940 1.04964 0.98879 0.92528 0.92732 0.92603 0.90525 0.90758 0.90533 0.90765 0.92788 0.92583 0.92564 0.89211 0.90078 0.88407 0.90421 0.79933 0.89611 0.76570 0.82911 0.89715 0.87539 0.88418 0.89494 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 0.30 9.29 37.16 0.35 0.64 16 2 C -0.41 1.15 5.17 37.16 0.19 1.34 16 3 Si 1.01 -3.33 8.66 -169.99 -1.47 -4.80 16 4 C -0.41 0.86 5.14 37.15 0.19 1.05 16 5 C -0.14 0.28 9.29 37.15 0.34 0.62 16 6 C -0.43 0.62 5.23 37.59 0.20 0.82 16 7 C 0.12 -0.02 5.88 -3.72 -0.02 -0.04 16 8 N -0.60 -0.28 2.62 -174.17 -0.46 -0.73 16 9 C 0.56 1.95 7.38 -12.39 -0.09 1.85 16 10 O -0.51 -3.65 15.11 5.30 0.08 -3.57 16 11 C -0.14 -0.31 5.48 -104.92 -0.58 -0.89 16 12 C -0.12 -0.03 7.35 -39.11 -0.29 -0.31 16 13 C 0.11 0.09 7.23 -39.49 -0.29 -0.19 16 14 F -0.12 -0.15 16.73 2.25 0.04 -0.11 16 15 C -0.06 -0.04 5.30 -104.49 -0.55 -0.60 16 16 C -0.09 0.10 2.43 36.00 0.09 0.19 16 17 O -0.54 0.41 12.86 -35.23 -0.45 -0.04 16 18 Si 0.94 -1.52 25.48 -169.99 -4.33 -5.85 16 19 H -0.24 0.15 6.72 56.52 0.38 0.53 16 20 H -0.25 0.41 7.11 56.52 0.40 0.81 16 21 H -0.24 0.21 7.11 56.52 0.40 0.61 16 22 C -0.14 -0.16 8.62 -39.57 -0.34 -0.50 16 23 C 0.16 0.45 7.24 -38.97 -0.28 0.17 16 24 F -0.11 -0.53 15.94 2.25 0.04 -0.50 16 25 C 0.08 -0.17 5.10 -3.73 -0.02 -0.19 16 26 C -0.44 1.42 4.37 37.58 0.16 1.59 16 27 H 0.06 -0.13 7.63 -51.92 -0.40 -0.52 16 28 H 0.05 -0.08 8.14 -51.93 -0.42 -0.51 16 29 H 0.05 -0.14 7.60 -51.93 -0.39 -0.53 16 30 H 0.08 -0.22 7.96 -51.93 -0.41 -0.64 16 31 H 0.07 -0.22 7.96 -51.93 -0.41 -0.63 16 32 H 0.08 -0.15 7.63 -51.93 -0.40 -0.55 16 33 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 34 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 35 H 0.06 -0.15 7.99 -51.93 -0.41 -0.56 16 36 H 0.06 -0.14 7.94 -51.93 -0.41 -0.55 16 37 H 0.09 -0.20 7.64 -51.93 -0.40 -0.60 16 38 H 0.08 -0.02 7.99 -51.93 -0.41 -0.43 16 39 H 0.10 0.18 6.89 -51.93 -0.36 -0.17 16 40 H 0.08 -0.16 8.05 -51.93 -0.42 -0.58 16 41 H 0.18 -0.31 2.78 -52.49 -0.15 -0.45 16 42 H 0.09 -0.22 7.89 -51.93 -0.41 -0.63 16 43 H 0.39 -2.02 8.74 45.56 0.40 -1.62 16 44 H 0.15 -0.05 4.86 -52.48 -0.25 -0.30 16 45 H 0.08 -0.30 8.05 -51.93 -0.42 -0.72 16 46 H 0.11 -0.21 3.94 -52.29 -0.21 -0.42 16 47 H 0.10 -0.44 7.99 -51.93 -0.41 -0.86 16 48 H 0.09 -0.27 6.58 -51.93 -0.34 -0.61 16 LS Contribution 379.20 15.07 5.71 5.71 Total: 0.00 -7.24 379.20 -8.08 -15.32 By element: Atomic # 1 Polarization: -4.67 SS G_CDS: -6.30 Total: -10.96 kcal Atomic # 6 Polarization: 6.48 SS G_CDS: -0.94 Total: 5.55 kcal Atomic # 7 Polarization: -0.28 SS G_CDS: -0.46 Total: -0.73 kcal Atomic # 8 Polarization: -3.24 SS G_CDS: -0.37 Total: -3.61 kcal Atomic # 9 Polarization: -0.68 SS G_CDS: 0.07 Total: -0.61 kcal Atomic # 14 Polarization: -4.85 SS G_CDS: -5.80 Total: -10.66 kcal Total LS contribution 5.71 Total: 5.71 kcal Total: -7.24 -8.08 -15.32 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17051536_12360598.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -125.510 kcal (2) G-P(sol) polarization free energy of solvation -7.239 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.750 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.079 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.319 kcal (6) G-S(sol) free energy of system = (1) + (5) -140.829 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds