Wall clock time and date at job start Tue Mar 9 2021 13:01:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 Si 1.86296 * 109.47192 * 2 1 4 4 C 1.86300 * 109.90932 * 298.66469 * 3 2 1 5 5 C 1.52995 * 109.46856 * 298.38561 * 4 3 2 6 6 C 1.87351 * 109.91849 * 59.77394 * 3 2 1 7 7 C 1.53823 * 107.31186 * 166.18758 * 6 3 2 8 8 N 1.46302 * 109.22988 * 306.10675 * 7 6 3 9 9 C 1.34768 * 119.08812 * 252.10019 * 8 7 6 10 10 O 1.21281 * 120.00159 * 0.02562 * 9 8 7 11 11 C 1.50703 * 120.00069 * 179.97438 * 9 8 7 12 12 O 1.42899 * 109.47437 * 179.97438 * 11 9 8 13 13 C 1.35895 * 116.99995 * 180.02562 * 12 11 9 14 14 C 1.38710 * 120.05732 * 359.72641 * 13 12 11 15 15 C 1.38167 * 119.94129 * 179.72572 * 14 13 12 16 16 C 1.38246 * 120.06015 * 0.57191 * 15 14 13 17 17 C 1.38288 * 120.10549 * 359.68206 * 16 15 14 18 18 C 1.50706 * 119.96929 * 180.02562 * 17 16 15 19 19 O 1.42898 * 109.47043 * 120.02231 * 18 17 16 20 20 Si 1.86298 * 109.46981 * 0.02562 * 18 17 16 21 21 H 1.48509 * 109.47070 * 60.00135 * 20 18 17 22 22 H 1.48501 * 109.47025 * 180.02562 * 20 18 17 23 23 H 1.48496 * 109.47532 * 300.00163 * 20 18 17 24 24 C 1.38118 * 120.05883 * 0.04076 * 17 16 15 25 25 C 1.46302 * 121.82394 * 72.37568 * 8 7 6 26 26 C 1.53828 * 109.22950 * 287.62563 * 25 8 7 27 27 H 1.09000 * 109.47021 * 183.22594 * 1 2 3 28 28 H 1.08997 * 109.46698 * 303.23002 * 1 2 3 29 29 H 1.09005 * 109.46485 * 63.23016 * 1 2 3 30 30 H 1.09010 * 109.47069 * 240.00194 * 2 1 3 31 31 H 1.08996 * 109.47030 * 120.00715 * 2 1 3 32 32 H 1.08995 * 109.47414 * 58.38957 * 4 3 2 33 33 H 1.09006 * 109.46962 * 178.39242 * 4 3 2 34 34 H 1.09002 * 109.47330 * 58.45111 * 5 4 3 35 35 H 1.09006 * 109.46885 * 178.44844 * 5 4 3 36 36 H 1.09000 * 109.47509 * 298.44357 * 5 4 3 37 37 H 1.09002 * 109.89151 * 46.73580 * 6 3 2 38 38 H 1.09003 * 109.88878 * 285.63548 * 6 3 2 39 39 H 1.09004 * 109.51018 * 186.18276 * 7 6 3 40 40 H 1.08998 * 109.55554 * 66.06019 * 7 6 3 41 41 H 1.08998 * 109.47291 * 300.00399 * 11 9 8 42 42 H 1.09004 * 109.46478 * 60.00362 * 11 9 8 43 43 H 1.07992 * 120.02926 * 359.97438 * 14 13 12 44 44 H 1.08008 * 119.96878 * 180.27418 * 15 14 13 45 45 H 1.07992 * 119.94876 * 179.70379 * 16 15 14 46 46 H 1.08995 * 109.47077 * 240.02008 * 18 17 16 47 47 H 0.96703 * 113.99907 * 299.99756 * 19 18 17 48 48 H 1.08000 * 120.03197 * 179.97438 * 24 17 16 49 49 H 1.09000 * 109.51586 * 47.54869 * 25 8 7 50 50 H 1.08998 * 109.51194 * 167.70110 * 25 8 7 51 51 H 1.08997 * 109.88805 * 294.44266 * 26 25 8 52 52 H 1.08996 * 109.88968 * 173.33656 * 26 25 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 14 2.1511 1.7564 0.0000 4 6 1.5703 2.6346 -1.5370 5 6 2.1407 1.9333 -2.7713 6 6 1.5278 2.6538 1.5220 7 6 2.3387 3.9546 1.6505 8 7 3.7664 3.6351 1.6433 9 6 4.4679 3.7440 2.7889 10 8 3.9147 4.1021 3.8070 11 6 5.9395 3.4195 2.8050 12 8 6.4550 3.6106 4.1240 13 6 7.7773 3.3599 4.3119 14 6 8.5613 2.9332 3.2501 15 6 9.9067 2.6844 3.4426 16 6 10.4692 2.8490 4.6946 17 6 9.6886 3.2693 5.7560 18 6 10.3051 3.4482 7.1195 19 8 10.1492 4.8056 7.5382 20 14 12.1181 3.0269 7.0413 21 1 12.7937 3.9252 6.0708 22 1 12.7255 3.2027 8.3850 23 1 12.2803 1.6164 6.6061 24 6 8.3444 3.5248 5.5676 25 6 4.4549 3.2065 0.4257 26 6 4.0229 1.7717 0.0778 27 1 -0.3633 -1.0260 0.0578 28 1 -0.3632 0.5632 0.8596 29 1 -0.3632 0.4629 -0.9176 30 1 1.8934 -0.5138 -0.8901 31 1 1.8933 -0.5139 0.8899 32 1 0.4814 2.6138 -1.5779 33 1 1.9134 3.6691 -1.5159 34 1 1.8202 0.8914 -2.7778 35 1 1.7787 2.4304 -3.6713 36 1 3.2294 1.9784 -2.7443 37 1 1.6787 2.0339 2.4058 38 1 0.4691 2.8866 1.4076 39 1 2.0818 4.4528 2.5854 40 1 2.1086 4.6123 0.8123 41 1 6.0862 2.3823 2.5039 42 1 6.4640 4.0769 2.1116 43 1 8.1213 2.7994 2.2730 44 1 10.5185 2.3564 2.6151 45 1 11.5200 2.6494 4.8441 46 1 9.8092 2.7890 7.8318 47 1 10.5667 5.4492 6.9496 48 1 7.7351 3.8526 6.3968 49 1 4.1932 3.8745 -0.3949 50 1 5.5324 3.2330 0.5882 51 1 4.3676 1.0833 0.8494 52 1 4.4365 1.4840 -0.8887 RHF calculation, no. of doubly occupied orbitals= 64 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17051536_4860298.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:01:29 Heat of formation + Delta-G solvation = -117.247374 kcal Electronic energy + Delta-G solvation = -29120.970927 eV Core-core repulsion = 25209.267736 eV Total energy + Delta-G solvation = -3911.703191 eV No. of doubly occupied orbitals = 64 Molecular weight (most abundant/longest-lived isotopes) = 351.182 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -41.65281 -40.77916 -39.01550 -37.41410 -37.12127 -33.91992 -33.20938 -32.77363 -32.46222 -31.61058 -30.73338 -28.86609 -26.79066 -24.72212 -24.05431 -23.70438 -23.60409 -23.37407 -22.25280 -20.25545 -19.44232 -18.45397 -17.69662 -17.50018 -17.46090 -17.11626 -16.54397 -16.23297 -16.03285 -15.73757 -15.58793 -15.54033 -15.02426 -14.98230 -14.94625 -14.49151 -14.45583 -14.35498 -14.25754 -14.17102 -13.87988 -13.61208 -13.47639 -13.25189 -13.00129 -12.96611 -12.92103 -12.57359 -12.52708 -12.34784 -12.22463 -12.21134 -12.12630 -11.95254 -11.90890 -11.55004 -10.89199 -10.58393 -10.55676 -10.48572 -10.42357 -9.91337 -9.80542 -9.26479 0.19402 0.39616 1.12809 1.41597 1.43863 1.47310 1.51799 1.52677 1.63217 1.68555 1.91014 2.33297 2.44054 2.66535 3.25335 3.47870 3.62794 3.68158 3.83374 3.86800 3.88799 3.93390 3.99138 4.14692 4.16433 4.19637 4.24446 4.27571 4.30383 4.33369 4.37059 4.37682 4.54230 4.55681 4.58076 4.64082 4.65042 4.70198 4.86424 4.95649 4.96909 5.03547 5.05186 5.13724 5.18659 5.22941 5.24150 5.32439 5.34183 5.41222 5.42485 5.44934 5.64853 6.11991 6.34153 6.55894 7.06222 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.411 4.411 3 Si 1.003 2.997 4 C -0.410 4.410 5 C -0.144 4.144 6 C -0.425 4.425 7 C 0.121 3.879 8 N -0.611 5.611 9 C 0.515 3.485 10 O -0.511 6.511 11 C 0.040 3.960 12 O -0.288 6.288 13 C 0.130 3.870 14 C -0.207 4.207 15 C -0.072 4.072 16 C -0.163 4.163 17 C -0.080 4.080 18 C -0.083 4.083 19 O -0.536 6.536 20 Si 0.956 3.044 21 H -0.251 1.251 22 H -0.254 1.254 23 H -0.251 1.251 24 C -0.118 4.118 25 C 0.112 3.888 26 C -0.429 4.429 27 H 0.053 0.947 28 H 0.055 0.945 29 H 0.055 0.945 30 H 0.074 0.926 31 H 0.073 0.927 32 H 0.076 0.924 33 H 0.073 0.927 34 H 0.055 0.945 35 H 0.053 0.947 36 H 0.055 0.945 37 H 0.080 0.920 38 H 0.088 0.912 39 H 0.096 0.904 40 H 0.077 0.923 41 H 0.095 0.905 42 H 0.094 0.906 43 H 0.129 0.871 44 H 0.130 0.870 45 H 0.123 0.877 46 H 0.121 0.879 47 H 0.377 0.623 48 H 0.138 0.862 49 H 0.083 0.917 50 H 0.083 0.917 51 H 0.081 0.919 52 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.493 -1.897 -6.880 7.291 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C -0.497 4.497 3 Si 1.197 2.803 4 C -0.497 4.497 5 C -0.201 4.201 6 C -0.511 4.511 7 C 0.000 4.000 8 N -0.347 5.347 9 C 0.302 3.698 10 O -0.384 6.384 11 C -0.039 4.039 12 O -0.201 6.201 13 C 0.084 3.916 14 C -0.226 4.226 15 C -0.090 4.090 16 C -0.181 4.181 17 C -0.080 4.080 18 C -0.194 4.194 19 O -0.341 6.341 20 Si 0.778 3.222 21 H -0.175 1.175 22 H -0.178 1.178 23 H -0.174 1.174 24 C -0.137 4.137 25 C -0.010 4.010 26 C -0.516 4.516 27 H 0.072 0.928 28 H 0.074 0.926 29 H 0.074 0.926 30 H 0.093 0.907 31 H 0.092 0.908 32 H 0.095 0.905 33 H 0.092 0.908 34 H 0.074 0.926 35 H 0.073 0.927 36 H 0.074 0.926 37 H 0.099 0.901 38 H 0.107 0.893 39 H 0.114 0.886 40 H 0.095 0.905 41 H 0.112 0.888 42 H 0.112 0.888 43 H 0.147 0.853 44 H 0.148 0.852 45 H 0.140 0.860 46 H 0.138 0.862 47 H 0.224 0.776 48 H 0.156 0.844 49 H 0.101 0.899 50 H 0.101 0.899 51 H 0.100 0.900 52 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 1.582 -2.114 -5.742 6.320 hybrid contribution -0.131 0.097 -0.886 0.901 sum 1.451 -2.016 -6.628 7.078 Atomic orbital electron populations 1.21342 0.94931 1.02091 1.01754 1.25986 1.01041 1.18080 1.04630 0.79498 0.66488 0.67554 0.66809 1.26003 1.05542 1.06557 1.11593 1.21350 1.00696 1.00432 0.97599 1.26716 1.04436 1.04294 1.15658 1.21192 0.77827 0.96712 1.04272 1.47923 1.09975 1.67869 1.08903 1.20066 0.87999 0.78036 0.83736 1.90771 1.70870 1.44679 1.32130 1.22579 0.93212 1.03062 0.85022 1.86176 1.21318 1.83365 1.29217 1.19060 0.82471 0.95607 0.94423 1.21282 0.95408 1.07257 0.98619 1.20878 0.94125 0.97012 0.96971 1.20967 0.99741 1.04093 0.93286 1.20134 0.93465 0.98638 0.95804 1.25057 1.11997 0.87737 0.94559 1.86536 1.80375 1.14492 1.52708 0.85599 0.74383 0.81187 0.80982 1.17482 1.17808 1.17435 1.20270 0.94402 1.03592 0.95413 1.21398 0.97233 0.95574 0.86828 1.26736 1.21440 0.98368 1.05033 0.92781 0.92575 0.92553 0.90679 0.90822 0.90493 0.90806 0.92584 0.92747 0.92637 0.90110 0.89338 0.88552 0.90511 0.88760 0.88831 0.85320 0.85197 0.85972 0.86152 0.77591 0.84368 0.89873 0.89858 0.90035 0.88996 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 0.21 9.29 37.16 0.35 0.55 16 2 C -0.41 0.83 5.17 37.16 0.19 1.02 16 3 Si 1.00 -3.43 8.66 -169.99 -1.47 -4.90 16 4 C -0.41 1.23 5.17 37.16 0.19 1.43 16 5 C -0.14 0.39 9.29 37.16 0.35 0.73 16 6 C -0.42 0.63 5.22 37.59 0.20 0.83 16 7 C 0.12 -0.06 5.88 -3.72 -0.02 -0.08 16 8 N -0.61 0.31 2.61 -172.98 -0.45 -0.15 16 9 C 0.52 1.27 7.72 -10.99 -0.08 1.18 16 10 O -0.51 -3.66 15.78 -14.35 -0.23 -3.89 16 11 C 0.04 0.01 3.53 36.01 0.13 0.13 16 12 O -0.29 -1.06 9.67 -39.32 -0.38 -1.44 16 13 C 0.13 0.31 6.69 -39.21 -0.26 0.05 16 14 C -0.21 -0.03 9.04 -39.43 -0.36 -0.39 16 15 C -0.07 0.02 10.04 -39.60 -0.40 -0.38 16 16 C -0.16 -0.06 8.67 -39.56 -0.34 -0.40 16 17 C -0.08 -0.09 5.39 -104.64 -0.56 -0.65 16 18 C -0.08 -0.01 2.82 36.01 0.10 0.09 16 19 O -0.54 -0.52 12.77 -35.23 -0.45 -0.97 16 20 Si 0.96 -0.49 25.07 -169.99 -4.26 -4.75 16 21 H -0.25 0.11 7.11 56.52 0.40 0.52 16 22 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 23 H -0.25 0.02 7.11 56.52 0.40 0.42 16 24 C -0.12 -0.30 9.55 -39.43 -0.38 -0.68 16 25 C 0.11 -0.39 5.75 -3.72 -0.02 -0.41 16 26 C -0.43 1.62 5.23 37.59 0.20 1.82 16 27 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 28 H 0.06 -0.10 7.88 -51.93 -0.41 -0.51 16 29 H 0.06 -0.11 8.04 -51.93 -0.42 -0.53 16 30 H 0.07 -0.17 7.79 -51.92 -0.40 -0.57 16 31 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 32 H 0.08 -0.21 7.96 -51.93 -0.41 -0.62 16 33 H 0.07 -0.24 7.96 -51.93 -0.41 -0.65 16 34 H 0.06 -0.16 7.76 -51.93 -0.40 -0.56 16 35 H 0.05 -0.11 8.14 -51.93 -0.42 -0.53 16 36 H 0.05 -0.20 7.50 -51.93 -0.39 -0.59 16 37 H 0.08 0.00 7.99 -51.93 -0.41 -0.41 16 38 H 0.09 -0.20 7.99 -51.93 -0.41 -0.61 16 39 H 0.10 0.17 6.91 -51.93 -0.36 -0.18 16 40 H 0.08 -0.19 8.05 -51.93 -0.42 -0.61 16 41 H 0.09 -0.21 7.49 -51.93 -0.39 -0.60 16 42 H 0.09 -0.23 7.04 -51.93 -0.37 -0.60 16 43 H 0.13 -0.32 6.30 -52.49 -0.33 -0.65 16 44 H 0.13 -0.33 8.06 -52.48 -0.42 -0.76 16 45 H 0.12 -0.12 4.88 -52.49 -0.26 -0.38 16 46 H 0.12 -0.07 7.96 -51.93 -0.41 -0.48 16 47 H 0.38 -0.87 8.70 45.56 0.40 -0.48 16 48 H 0.14 0.42 8.06 -52.49 -0.42 -0.01 16 49 H 0.08 -0.40 8.05 -51.93 -0.42 -0.82 16 50 H 0.08 -0.42 5.76 -51.93 -0.30 -0.71 16 51 H 0.08 -0.27 7.99 -51.93 -0.41 -0.68 16 52 H 0.09 -0.45 7.49 -51.93 -0.39 -0.83 16 LS Contribution 408.14 15.07 6.15 6.15 Total: 0.00 -8.33 408.14 -10.06 -18.38 By element: Atomic # 1 Polarization: -5.04 SS G_CDS: -8.24 Total: -13.27 kcal Atomic # 6 Polarization: 5.57 SS G_CDS: -0.73 Total: 4.83 kcal Atomic # 7 Polarization: 0.31 SS G_CDS: -0.45 Total: -0.15 kcal Atomic # 8 Polarization: -5.24 SS G_CDS: -1.06 Total: -6.29 kcal Atomic # 14 Polarization: -3.92 SS G_CDS: -5.73 Total: -9.66 kcal Total LS contribution 6.15 Total: 6.15 kcal Total: -8.33 -10.06 -18.38 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17051536_4860298.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.863 kcal (2) G-P(sol) polarization free energy of solvation -8.326 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.189 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.059 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.384 kcal (6) G-S(sol) free energy of system = (1) + (5) -117.247 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds