Wall clock time and date at job start Tue Mar 9 2021 13:04:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.42903 * 109.46974 * 2 1 4 4 C 1.35899 * 116.99705 * 85.09355 * 3 2 1 5 5 C 1.38733 * 120.04849 * 174.22585 * 4 3 2 6 6 C 1.38148 * 119.93800 * 179.74104 * 5 4 3 7 7 C 1.38269 * 120.05824 * 0.50608 * 6 5 4 8 8 C 1.50693 * 119.94466 * 179.74061 * 7 6 5 9 9 O 1.42905 * 109.47476 * 245.02244 * 8 7 6 10 10 Si 1.86298 * 109.47410 * 5.02551 * 8 7 6 11 11 C 1.38265 * 120.10956 * 359.77078 * 7 6 5 12 12 C 1.38146 * 120.05388 * 359.97011 * 11 7 6 13 13 C 1.50703 * 109.47076 * 240.00231 * 2 1 3 14 14 O 1.21272 * 120.00210 * 112.51198 * 13 2 1 15 15 N 1.34779 * 119.99653 * 292.51221 * 13 2 1 16 16 C 1.47130 * 125.59183 * 175.09197 * 15 13 2 17 17 C 1.54583 * 107.36148 * 179.04230 * 16 15 13 18 18 C 1.53743 * 102.74715 * 339.15112 * 17 16 15 19 19 C 1.52318 * 116.25834 * 265.00068 * 18 17 16 20 20 C 1.54051 * 86.61074 * 216.60058 * 19 18 17 21 21 O 1.42896 * 113.56774 * 269.69234 * 20 19 18 22 22 C 1.52307 * 116.26352 * 162.65663 * 18 17 16 23 23 C 1.47704 * 125.59346 * 355.06203 * 15 13 2 24 24 H 1.09008 * 109.47091 * 185.67681 * 1 2 3 25 25 H 1.08994 * 109.47353 * 305.67303 * 1 2 3 26 26 H 1.08995 * 109.47522 * 65.67877 * 1 2 3 27 27 H 1.08997 * 109.47318 * 119.99992 * 2 1 3 28 28 H 1.07991 * 120.03316 * 359.97438 * 5 4 3 29 29 H 1.07999 * 119.97385 * 180.22567 * 6 5 4 30 30 H 1.09009 * 109.46902 * 125.02566 * 8 7 6 31 31 H 0.96702 * 113.99598 * 60.00442 * 9 8 7 32 32 H 1.48508 * 109.99877 * 58.67657 * 10 8 7 33 33 H 1.48505 * 110.00181 * 179.97438 * 10 8 7 34 34 H 1.07998 * 119.97083 * 179.97438 * 11 7 6 35 35 H 1.08003 * 120.02646 * 179.97438 * 12 11 7 36 36 H 1.09002 * 109.86898 * 59.59205 * 16 15 13 37 37 H 1.09004 * 109.97865 * 298.55149 * 16 15 13 38 38 H 1.09001 * 110.75531 * 97.46319 * 17 16 15 39 39 H 1.09002 * 110.75426 * 220.83555 * 17 16 15 40 40 H 1.09005 * 113.68169 * 331.02509 * 19 18 17 41 41 H 1.08993 * 113.69054 * 102.16717 * 19 18 17 42 42 H 1.09001 * 113.63557 * 138.95307 * 20 19 18 43 43 H 0.96700 * 114.00441 * 277.80715 * 21 20 19 44 44 H 1.08998 * 113.69530 * 257.81665 * 22 18 17 45 45 H 1.08999 * 113.68790 * 28.87061 * 22 18 17 46 46 H 1.09002 * 110.39535 * 321.38302 * 23 15 13 47 47 H 1.08990 * 110.39574 * 83.66979 * 23 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.1143 1.9635 1.2065 5 6 2.6815 3.2266 1.2931 6 6 2.7853 3.8530 2.5200 7 6 2.3339 3.2180 3.6623 8 6 2.4537 3.9013 5.0000 9 8 3.3539 3.1662 5.8316 10 14 3.1034 5.6305 4.7582 11 6 1.7734 1.9568 3.5792 12 6 1.6626 1.3283 2.3540 13 6 2.0323 -0.7104 -1.2305 14 8 2.6136 -0.0890 -2.0946 15 7 1.8356 -2.0363 -1.3706 16 6 2.1807 -2.8324 -2.5588 17 6 1.7988 -4.2998 -2.2578 18 6 1.7499 -4.3293 -0.7215 19 6 3.0175 -4.7934 -0.0157 20 6 2.0889 -5.4717 1.0093 21 8 1.7485 -4.6327 2.1148 22 6 1.0132 -5.5049 -0.0930 23 6 1.2387 -2.9288 -0.3562 24 1 -0.3634 -1.0227 0.1017 25 1 -0.3634 0.5993 0.8348 26 1 -0.3634 0.4232 -0.9364 27 1 1.8934 -0.5138 0.8899 28 1 3.0382 3.7212 0.4019 29 1 3.2235 4.8378 2.5877 30 1 1.4735 3.9445 5.4750 31 1 4.2475 3.0874 5.4705 32 1 2.1925 6.3956 3.8692 33 1 3.2255 6.3153 6.0703 34 1 1.4220 1.4626 4.4729 35 1 1.2250 0.3429 2.2897 36 1 3.2505 -2.7607 -2.7549 37 1 1.6211 -2.4737 -3.4228 38 1 0.8228 -4.5393 -2.6800 39 1 2.5613 -4.9822 -2.6333 40 1 3.6119 -5.4957 -0.6002 41 1 3.6097 -3.9789 0.4014 42 1 2.4273 -6.4608 1.3180 43 1 2.4195 -4.6072 2.8106 44 1 0.0136 -5.2557 0.2630 45 1 1.0341 -6.4099 -0.7003 46 1 1.5767 -2.6493 0.6417 47 1 0.1508 -2.8931 -0.4118 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17058092_10157680.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:04:19 Heat of formation + Delta-G solvation = -80.924237 kcal Electronic energy + Delta-G solvation = -29552.929991 eV Core-core repulsion = 25476.100278 eV Total energy + Delta-G solvation = -4076.829712 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.166 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -42.15720 -41.44117 -40.21103 -38.98383 -37.61122 -37.10421 -35.41847 -33.64117 -32.07168 -31.71466 -30.92315 -29.02074 -27.09988 -26.76015 -25.88258 -24.51002 -23.75340 -22.77091 -22.13175 -20.54415 -20.09069 -19.44989 -18.46350 -18.17899 -17.94003 -17.33099 -17.19293 -16.59639 -16.50138 -16.27670 -15.93603 -15.86676 -15.82584 -15.36240 -14.85500 -14.79541 -14.68193 -14.54452 -14.23888 -14.15844 -14.08825 -13.85184 -13.60520 -13.47407 -13.30066 -13.07872 -13.03864 -12.84571 -12.48227 -12.17170 -12.08314 -12.03765 -11.93906 -11.84100 -11.65747 -11.36257 -10.87308 -10.71153 -10.39750 -10.02837 -9.74494 -9.17472 -5.01125 0.26573 0.36352 1.32520 1.39573 1.51087 1.66257 2.00017 2.37351 2.67784 2.85057 3.04985 3.15279 3.34451 3.45696 3.50103 3.56457 3.65533 3.73084 3.73437 3.78420 3.86772 3.88503 4.04807 4.11375 4.22040 4.25055 4.28742 4.43393 4.44894 4.47117 4.49889 4.56686 4.60011 4.63708 4.64598 4.66625 4.75377 4.79385 4.92119 4.95482 5.00361 5.01735 5.08867 5.15043 5.21540 5.32209 5.49785 5.68391 6.27570 6.38729 6.48680 6.59534 7.06649 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C 0.073 3.927 3 O -0.284 6.284 4 C 0.136 3.864 5 C -0.142 4.142 6 C -0.074 4.074 7 C -0.158 4.158 8 C -0.062 4.062 9 O -0.542 6.542 10 Si 0.684 3.316 11 C -0.050 4.050 12 C -0.211 4.211 13 C 0.535 3.465 14 O -0.513 6.513 15 N -0.616 5.616 16 C 0.110 3.890 17 C -0.120 4.120 18 C -0.090 4.090 19 C -0.156 4.156 20 C 0.079 3.921 21 O -0.552 6.552 22 C -0.116 4.116 23 C 0.122 3.878 24 H 0.081 0.919 25 H 0.079 0.921 26 H 0.075 0.925 27 H 0.098 0.902 28 H 0.138 0.862 29 H 0.134 0.866 30 H 0.112 0.888 31 H 0.379 0.621 32 H -0.257 1.257 33 H -0.255 1.255 34 H 0.129 0.871 35 H 0.131 0.869 36 H 0.071 0.929 37 H 0.071 0.929 38 H 0.082 0.918 39 H 0.087 0.913 40 H 0.095 0.905 41 H 0.075 0.925 42 H 0.071 0.929 43 H 0.384 0.616 44 H 0.083 0.917 45 H 0.102 0.898 46 H 0.087 0.913 47 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.541 -6.082 1.238 6.231 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.235 4.235 2 C 0.013 3.987 3 O -0.197 6.197 4 C 0.090 3.910 5 C -0.161 4.161 6 C -0.092 4.092 7 C -0.159 4.159 8 C -0.173 4.173 9 O -0.347 6.347 10 Si 0.586 3.414 11 C -0.068 4.068 12 C -0.230 4.230 13 C 0.321 3.679 14 O -0.387 6.387 15 N -0.352 5.352 16 C -0.012 4.012 17 C -0.158 4.158 18 C -0.091 4.091 19 C -0.194 4.194 20 C 0.019 3.981 21 O -0.358 6.358 22 C -0.153 4.153 23 C -0.001 4.001 24 H 0.100 0.900 25 H 0.098 0.902 26 H 0.094 0.906 27 H 0.116 0.884 28 H 0.155 0.845 29 H 0.151 0.849 30 H 0.129 0.871 31 H 0.226 0.774 32 H -0.182 1.182 33 H -0.180 1.180 34 H 0.147 0.853 35 H 0.149 0.851 36 H 0.089 0.911 37 H 0.089 0.911 38 H 0.101 0.899 39 H 0.105 0.895 40 H 0.113 0.887 41 H 0.094 0.906 42 H 0.089 0.911 43 H 0.232 0.768 44 H 0.101 0.899 45 H 0.121 0.879 46 H 0.105 0.895 47 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -0.304 -4.631 0.684 4.691 hybrid contribution -0.133 -0.742 0.407 0.856 sum -0.438 -5.372 1.090 5.499 Atomic orbital electron populations 1.22353 0.92253 1.04087 1.04778 1.22119 0.95986 0.82864 0.97768 1.86212 1.80886 1.25563 1.27032 1.19091 0.95035 0.92866 0.84005 1.20418 1.03259 0.93629 0.98780 1.20808 0.98011 0.98875 0.91474 1.20234 1.03714 0.96614 0.95344 1.24959 0.97114 1.05557 0.89699 1.86497 1.24220 1.77021 1.46964 0.94791 0.90100 0.74894 0.81644 1.20791 0.95444 0.93700 0.96883 1.21332 1.07155 1.01856 0.92637 1.19685 0.79704 0.80604 0.87867 1.90772 1.40203 1.64925 1.42763 1.48411 1.62465 1.06312 1.18047 1.21992 1.01257 0.90122 0.87823 1.22522 1.03124 0.95372 0.94774 1.21844 0.97849 0.94442 0.94954 1.23488 0.96099 1.01265 0.98532 1.22833 0.95938 0.92969 0.86343 1.86425 1.48473 1.69165 1.31690 1.22829 0.98983 0.97978 0.95552 1.22037 0.98017 0.87755 0.92252 0.90045 0.90218 0.90576 0.88434 0.84452 0.84912 0.87081 0.77398 1.18192 1.18008 0.85315 0.85117 0.91069 0.91069 0.89892 0.89458 0.88679 0.90587 0.91086 0.76824 0.89859 0.87922 0.89496 0.90534 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.09 8.98 37.16 0.33 0.42 16 2 C 0.07 0.10 2.03 -27.88 -0.06 0.05 16 3 O -0.28 -1.14 9.34 -39.22 -0.37 -1.51 16 4 C 0.14 0.34 6.58 -39.22 -0.26 0.08 16 5 C -0.14 -0.25 9.99 -39.43 -0.39 -0.65 16 6 C -0.07 -0.03 8.66 -39.60 -0.34 -0.37 16 7 C -0.16 -0.09 5.35 -104.60 -0.56 -0.65 16 8 C -0.06 0.00 2.80 36.00 0.10 0.10 16 9 O -0.54 -0.23 12.83 -35.23 -0.45 -0.68 16 10 Si 0.68 -0.43 29.80 -169.99 -5.07 -5.50 16 11 C -0.05 -0.04 9.68 -39.61 -0.38 -0.42 16 12 C -0.21 -0.18 8.22 -39.44 -0.32 -0.50 16 13 C 0.53 1.93 7.19 -10.98 -0.08 1.85 16 14 O -0.51 -4.15 16.85 -14.23 -0.24 -4.39 16 15 N -0.62 -0.50 3.34 -170.92 -0.57 -1.07 16 16 C 0.11 0.00 6.89 -2.87 -0.02 -0.02 16 17 C -0.12 0.32 6.34 -25.51 -0.16 0.16 16 18 C -0.09 0.23 0.93 -154.61 -0.14 0.09 16 19 C -0.16 0.45 7.21 -26.53 -0.19 0.26 16 20 C 0.08 -0.24 5.27 -25.67 -0.14 -0.38 16 21 O -0.55 1.31 12.48 -35.23 -0.44 0.87 16 22 C -0.12 0.37 7.28 -26.53 -0.19 0.18 16 23 C 0.12 -0.20 4.73 -3.12 -0.01 -0.21 16 24 H 0.08 -0.19 6.10 -51.92 -0.32 -0.50 16 25 H 0.08 -0.07 7.00 -51.93 -0.36 -0.44 16 26 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 27 H 0.10 -0.05 5.61 -51.93 -0.29 -0.34 16 28 H 0.14 0.14 8.06 -52.49 -0.42 -0.28 16 29 H 0.13 -0.23 4.90 -52.49 -0.26 -0.49 16 30 H 0.11 0.05 7.96 -51.92 -0.41 -0.37 16 31 H 0.38 -1.26 8.70 45.56 0.40 -0.86 16 32 H -0.26 -0.47 7.11 56.52 0.40 -0.06 16 33 H -0.26 -0.66 7.11 56.52 0.40 -0.26 16 34 H 0.13 -0.02 8.06 -52.49 -0.42 -0.44 16 35 H 0.13 -0.13 5.51 -52.48 -0.29 -0.42 16 36 H 0.07 0.06 8.14 -51.93 -0.42 -0.37 16 37 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 38 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 39 H 0.09 -0.31 7.99 -51.93 -0.42 -0.73 16 40 H 0.09 -0.34 8.05 -51.93 -0.42 -0.76 16 41 H 0.08 -0.14 8.12 -51.93 -0.42 -0.56 16 42 H 0.07 -0.27 8.14 -51.93 -0.42 -0.70 16 43 H 0.38 -2.17 9.12 45.56 0.42 -1.76 16 44 H 0.08 -0.21 8.12 -51.93 -0.42 -0.63 16 45 H 0.10 -0.44 8.14 -51.93 -0.42 -0.86 16 46 H 0.09 -0.15 6.42 -51.93 -0.33 -0.48 16 47 H 0.08 -0.17 7.13 -51.93 -0.37 -0.54 16 LS Contribution 372.70 15.07 5.62 5.62 Total: 0.00 -9.56 372.70 -10.42 -19.98 By element: Atomic # 1 Polarization: -7.22 SS G_CDS: -6.08 Total: -13.30 kcal Atomic # 6 Polarization: 2.80 SS G_CDS: -2.82 Total: -0.02 kcal Atomic # 7 Polarization: -0.50 SS G_CDS: -0.57 Total: -1.07 kcal Atomic # 8 Polarization: -4.21 SS G_CDS: -1.50 Total: -5.71 kcal Atomic # 14 Polarization: -0.43 SS G_CDS: -5.07 Total: -5.50 kcal Total LS contribution 5.62 Total: 5.62 kcal Total: -9.56 -10.42 -19.98 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17058092_10157680.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.947 kcal (2) G-P(sol) polarization free energy of solvation -9.557 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.504 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.420 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.977 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.924 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds