Wall clock time and date at job start Tue Mar 9 2021 13:04:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.35661 * 116.99663 * 2 1 4 4 C 1.38402 * 120.12336 * 359.97438 * 3 2 1 5 5 C 1.38723 * 120.03427 * 179.72661 * 4 3 2 6 6 O 1.35713 * 119.86711 * 180.23495 * 5 4 3 7 7 C 1.42909 * 116.99540 * 0.02562 * 6 5 4 8 8 C 1.39148 * 120.27020 * 0.25313 * 5 4 3 9 9 C 1.50702 * 119.87668 * 179.97438 * 8 5 4 10 10 O 1.42900 * 109.47203 * 285.00149 * 9 8 5 11 11 Si 1.86302 * 109.46957 * 165.00300 * 9 8 5 12 12 C 1.37586 * 120.24051 * 0.02562 * 8 5 4 13 13 C 1.39812 * 119.96216 * 0.02562 * 12 8 5 14 14 C 1.47308 * 120.13062 * 179.97438 * 13 12 8 15 15 O 1.21618 * 119.99742 * 216.91091 * 14 13 12 16 16 N 1.34776 * 120.00057 * 36.90778 * 14 13 12 17 17 C 1.47530 * 125.66121 * 4.99122 * 16 14 13 18 18 C 1.55351 * 104.89077 * 156.01420 * 17 16 14 19 19 C 1.53954 * 101.33381 * 36.02365 * 18 17 16 20 20 C 1.52503 * 115.78619 * 94.93764 * 19 18 17 21 21 C 1.54018 * 86.67654 * 93.33908 * 20 19 18 22 22 O 1.42898 * 113.57210 * 269.85106 * 21 20 19 23 23 C 1.52496 * 115.79621 * 196.45363 * 19 18 17 24 24 C 1.47346 * 125.65641 * 185.29286 * 16 14 13 25 25 H 1.09000 * 109.47445 * 300.00793 * 1 2 3 26 26 H 1.09000 * 109.46990 * 60.00101 * 1 2 3 27 27 H 1.08999 * 109.46979 * 180.02562 * 1 2 3 28 28 H 1.08001 * 119.98287 * 0.02562 * 4 3 2 29 29 H 1.09005 * 109.46308 * 180.02562 * 7 6 5 30 30 H 1.09004 * 109.46916 * 299.99717 * 7 6 5 31 31 H 1.08993 * 109.47019 * 60.00150 * 7 6 5 32 32 H 1.08995 * 109.47095 * 45.00336 * 9 8 5 33 33 H 0.96701 * 113.99768 * 60.00355 * 10 9 8 34 34 H 1.48492 * 110.00025 * 178.68175 * 11 9 8 35 35 H 1.48500 * 109.99977 * 300.00032 * 11 9 8 36 36 H 1.07998 * 120.01478 * 180.02562 * 12 8 5 37 37 H 1.09000 * 110.32876 * 274.98739 * 17 16 14 38 38 H 1.08999 * 110.33480 * 37.22267 * 17 16 14 39 39 H 1.09000 * 111.21701 * 277.95934 * 18 17 16 40 40 H 1.08994 * 110.96194 * 153.98290 * 18 17 16 41 41 H 1.09001 * 113.67768 * 207.78154 * 20 19 18 42 42 H 1.08999 * 113.68218 * 338.89405 * 20 19 18 43 43 H 1.09000 * 113.64062 * 139.08855 * 21 20 19 44 44 H 0.96701 * 114.00530 * 277.75705 * 22 21 20 45 45 H 1.09000 * 113.68406 * 21.11345 * 23 19 18 46 46 H 1.09002 * 113.67443 * 152.13214 * 23 19 18 47 47 H 1.09005 * 109.97498 * 301.28872 * 24 16 14 48 48 H 1.08998 * 109.97551 * 62.53439 * 24 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0449 1.2088 0.0000 4 6 1.2935 2.3711 -0.0005 5 6 1.9252 3.6062 0.0052 6 8 1.1851 4.7437 0.0095 7 6 -0.2360 4.5931 0.0083 8 6 3.3145 3.6835 0.0062 9 6 3.9914 5.0299 0.0119 10 8 3.8945 5.6173 -1.2872 11 14 5.7860 4.8208 0.4664 12 6 4.0724 2.5352 0.0010 13 6 3.4461 1.2852 -0.0059 14 6 4.2539 0.0534 -0.0121 15 8 3.8834 -0.9135 -0.6499 16 7 5.4036 -0.0020 0.6890 17 6 5.9169 1.0525 1.5841 18 6 6.8555 0.3121 2.5762 19 6 7.4799 -0.7571 1.6613 20 6 8.8262 -0.3965 1.0423 21 6 9.4696 -1.1107 2.2457 22 8 9.7159 -0.2476 3.3576 23 6 8.1651 -1.9199 2.3711 24 6 6.3596 -1.1233 0.6839 25 1 -0.3634 0.5139 0.8899 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0277 0.0005 28 1 0.2149 2.3165 -0.0005 29 1 -0.7056 5.5768 0.0116 30 1 -0.5428 4.0474 -0.8840 31 1 -0.5435 4.0403 0.8959 32 1 3.5051 5.6780 0.7409 33 1 2.9864 5.7558 -1.5895 34 1 6.4722 6.1374 0.4446 35 1 5.9004 4.2107 1.8155 36 1 5.1505 2.5995 0.0022 37 1 6.4748 1.7950 1.0136 38 1 5.0954 1.5257 2.1220 39 1 6.2894 -0.1481 3.3860 40 1 7.6178 0.9854 2.9680 41 1 9.0154 -0.8891 0.0885 42 1 9.0218 0.6754 1.0136 43 1 10.3355 -1.7178 1.9818 44 1 10.5336 0.2636 3.2852 45 1 7.8346 -2.0607 3.4002 46 1 8.1652 -2.8454 1.7953 47 1 5.8635 -2.0370 1.0114 48 1 6.7680 -1.2598 -0.3174 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17058092_12297780.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:04:34 Heat of formation + Delta-G solvation = -116.553164 kcal Electronic energy + Delta-G solvation = -32774.208740 eV Core-core repulsion = 28377.151849 eV Total energy + Delta-G solvation = -4397.056891 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.165 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.28674 -41.58406 -40.37387 -39.78380 -38.42255 -37.49580 -37.04679 -35.22027 -32.32844 -32.11647 -31.08443 -29.20675 -29.00258 -28.04468 -26.81591 -26.17526 -25.22160 -23.52129 -23.19877 -22.46694 -20.81155 -19.96635 -19.61685 -18.63514 -18.46864 -18.05512 -17.76422 -17.37819 -17.21644 -17.09658 -16.63200 -16.53653 -16.09356 -15.89557 -15.81239 -15.70953 -15.46061 -15.16892 -14.73140 -14.25696 -14.19040 -14.09186 -13.97846 -13.82741 -13.71367 -13.51255 -13.20936 -13.16773 -12.70422 -12.68726 -12.59322 -12.57542 -12.37302 -12.14403 -11.76106 -11.71001 -11.46902 -11.38050 -11.29965 -11.07889 -10.96609 -10.52104 -9.97998 -9.76550 -9.23417 -4.94969 -0.26820 0.01931 1.33828 1.54704 1.61539 1.85930 1.94888 2.02572 2.09732 2.42295 3.19802 3.28338 3.41875 3.44497 3.50132 3.63257 3.66836 3.71200 3.81705 3.90321 3.97565 4.06696 4.08135 4.17549 4.22474 4.23598 4.25634 4.27636 4.30738 4.38452 4.53239 4.55812 4.59553 4.64968 4.72381 4.75110 4.76897 4.82700 4.84885 4.95306 4.95934 5.03156 5.08286 5.16294 5.21647 5.23677 5.33136 5.43974 5.93800 6.20111 6.39752 6.59330 6.99113 7.06028 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.012 3.988 2 O -0.317 6.317 3 C 0.211 3.789 4 C -0.301 4.301 5 C 0.203 3.797 6 O -0.317 6.317 7 C 0.012 3.988 8 C -0.196 4.196 9 C -0.072 4.072 10 O -0.548 6.548 11 Si 0.775 3.225 12 C 0.002 3.998 13 C -0.218 4.218 14 C 0.580 3.420 15 O -0.570 6.570 16 N -0.614 5.614 17 C 0.086 3.914 18 C -0.100 4.100 19 C -0.086 4.086 20 C -0.150 4.150 21 C 0.084 3.916 22 O -0.567 6.567 23 C -0.124 4.124 24 C 0.121 3.879 25 H 0.074 0.926 26 H 0.072 0.928 27 H 0.114 0.886 28 H 0.167 0.833 29 H 0.123 0.877 30 H 0.070 0.930 31 H 0.068 0.932 32 H 0.075 0.925 33 H 0.374 0.626 34 H -0.288 1.288 35 H -0.236 1.236 36 H 0.160 0.840 37 H 0.093 0.907 38 H 0.079 0.921 39 H 0.070 0.930 40 H 0.106 0.894 41 H 0.100 0.900 42 H 0.088 0.912 43 H 0.082 0.918 44 H 0.397 0.603 45 H 0.069 0.931 46 H 0.106 0.894 47 H 0.057 0.943 48 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.194 2.441 1.950 3.130 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 O -0.229 6.229 3 C 0.162 3.838 4 C -0.321 4.321 5 C 0.156 3.844 6 O -0.229 6.229 7 C -0.081 4.081 8 C -0.197 4.197 9 C -0.180 4.180 10 O -0.354 6.354 11 Si 0.674 3.326 12 C -0.016 4.016 13 C -0.222 4.222 14 C 0.370 3.630 15 O -0.450 6.450 16 N -0.348 5.348 17 C -0.036 4.036 18 C -0.138 4.138 19 C -0.087 4.087 20 C -0.187 4.187 21 C 0.025 3.975 22 O -0.375 6.375 23 C -0.162 4.162 24 C -0.001 4.001 25 H 0.093 0.907 26 H 0.090 0.910 27 H 0.132 0.868 28 H 0.185 0.815 29 H 0.142 0.858 30 H 0.089 0.911 31 H 0.087 0.913 32 H 0.092 0.908 33 H 0.222 0.778 34 H -0.215 1.215 35 H -0.160 1.160 36 H 0.177 0.823 37 H 0.111 0.889 38 H 0.098 0.902 39 H 0.089 0.911 40 H 0.124 0.876 41 H 0.118 0.882 42 H 0.107 0.893 43 H 0.100 0.900 44 H 0.248 0.752 45 H 0.088 0.912 46 H 0.124 0.876 47 H 0.075 0.925 48 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 0.734 1.865 2.389 3.118 hybrid contribution -2.028 0.575 -0.015 2.108 sum -1.294 2.440 2.374 3.642 Atomic orbital electron populations 1.23483 0.75927 1.05921 1.02818 1.86245 1.23842 1.26276 1.86525 1.18868 0.90695 0.84853 0.89340 1.21393 1.02034 0.90551 1.18079 1.18838 0.90531 0.85209 0.89850 1.86039 1.21430 1.28428 1.86970 1.23497 0.75784 1.06121 1.02733 1.19552 0.90829 0.96751 1.12580 1.25434 1.14149 0.90163 0.88219 1.86691 1.33044 1.83268 1.32439 0.92789 0.74067 0.83509 0.82231 1.20932 0.99925 0.88796 0.91908 1.19020 0.90955 0.93708 1.18539 1.17771 0.79674 0.87004 0.78518 1.90788 1.70662 1.38576 1.45014 1.48508 1.20532 1.20464 1.45263 1.22947 0.98120 0.90819 0.91685 1.22493 0.98205 0.97150 0.95971 1.21943 0.93449 0.97490 0.95800 1.23562 0.93600 1.02811 0.98731 1.22706 0.96816 0.91724 0.86232 1.86424 1.48156 1.59792 1.43126 1.22970 0.94919 0.97056 1.01213 1.21867 0.89042 0.89164 1.00068 0.90714 0.90970 0.86763 0.81526 0.85836 0.91132 0.91304 0.90757 0.77753 1.21514 1.15989 0.82280 0.88861 0.90244 0.91135 0.87576 0.88151 0.89303 0.90036 0.75237 0.91213 0.87593 0.92505 0.91007 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 9.81 113.37 1.11 1.10 16 2 O -0.32 -3.01 9.18 -73.41 -0.67 -3.69 16 3 C 0.21 1.64 6.66 22.82 0.15 1.80 16 4 C -0.30 -0.65 8.01 22.42 0.18 -0.47 16 5 C 0.20 0.49 6.62 22.60 0.15 0.64 16 6 O -0.32 0.12 9.36 -90.34 -0.85 -0.73 16 7 C 0.01 -0.09 9.80 113.37 1.11 1.02 16 8 C -0.20 -0.61 5.27 -19.80 -0.10 -0.72 16 9 C -0.07 -0.17 2.32 71.24 0.17 0.00 16 10 O -0.55 -2.19 12.65 -148.98 -1.89 -4.08 16 11 Si 0.77 -0.21 29.62 68.60 2.03 1.82 16 12 C 0.00 0.01 6.78 22.50 0.15 0.16 16 13 C -0.22 -1.86 5.41 -20.00 -0.11 -1.97 16 14 C 0.58 7.15 7.33 86.63 0.63 7.79 16 15 O -0.57 -11.77 16.35 12.27 0.20 -11.57 16 16 N -0.61 -3.66 3.34 -816.17 -2.72 -6.38 16 17 C 0.09 -0.02 5.24 86.99 0.46 0.43 16 18 C -0.10 0.14 6.01 31.72 0.19 0.33 16 19 C -0.09 0.14 0.93 -52.17 -0.05 0.09 16 20 C -0.15 0.80 7.14 30.77 0.22 1.02 16 21 C 0.08 -0.39 5.27 31.27 0.16 -0.22 16 22 O -0.57 1.90 12.40 -148.98 -1.85 0.05 16 23 C -0.12 0.26 7.23 30.77 0.22 0.48 16 24 C 0.12 0.44 6.37 86.25 0.55 0.99 16 25 H 0.07 -0.37 7.66 -2.39 -0.02 -0.39 16 26 H 0.07 -0.28 7.66 -2.39 -0.02 -0.30 16 27 H 0.11 -0.34 8.14 -2.39 -0.02 -0.36 16 28 H 0.17 -0.60 4.50 -2.91 -0.01 -0.62 16 29 H 0.12 -1.29 8.14 -2.38 -0.02 -1.31 16 30 H 0.07 -0.62 7.65 -2.39 -0.02 -0.63 16 31 H 0.07 -0.60 7.65 -2.39 -0.02 -0.62 16 32 H 0.07 0.16 7.82 -2.39 -0.02 0.14 16 33 H 0.37 -0.01 8.59 -74.06 -0.64 -0.64 16 34 H -0.29 -1.76 7.11 99.48 0.71 -1.06 16 35 H -0.24 0.28 7.11 99.48 0.71 0.99 16 36 H 0.16 -0.15 2.88 -2.91 -0.01 -0.16 16 37 H 0.09 -0.44 6.36 -2.39 -0.02 -0.45 16 38 H 0.08 -0.01 7.28 -2.39 -0.02 -0.03 16 39 H 0.07 0.04 8.14 -2.39 -0.02 0.02 16 40 H 0.11 -0.32 7.19 -2.39 -0.02 -0.34 16 41 H 0.10 -0.64 8.01 -2.39 -0.02 -0.65 16 42 H 0.09 -0.60 8.12 -2.39 -0.02 -0.62 16 43 H 0.08 -0.55 8.14 -2.39 -0.02 -0.57 16 44 H 0.40 -4.40 9.12 -74.06 -0.68 -5.07 16 45 H 0.07 0.03 8.12 -2.39 -0.02 0.01 16 46 H 0.11 -0.41 8.14 -2.39 -0.02 -0.43 16 47 H 0.06 0.37 8.09 -2.38 -0.02 0.35 16 48 H 0.07 0.25 7.86 -2.39 -0.02 0.23 16 Total: 0.00 -23.81 378.58 -0.80 -24.61 By element: Atomic # 1 Polarization: -12.25 SS G_CDS: -0.25 Total: -12.51 kcal Atomic # 6 Polarization: 7.27 SS G_CDS: 5.20 Total: 12.47 kcal Atomic # 7 Polarization: -3.66 SS G_CDS: -2.72 Total: -6.38 kcal Atomic # 8 Polarization: -14.96 SS G_CDS: -5.05 Total: -20.01 kcal Atomic # 14 Polarization: -0.21 SS G_CDS: 2.03 Total: 1.82 kcal Total: -23.81 -0.80 -24.61 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17058092_12297780.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.941 kcal (2) G-P(sol) polarization free energy of solvation -23.814 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -115.756 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.797 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.612 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.553 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds