Wall clock time and date at job start Tue Mar 9 2021 13:05:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86303 * 109.47184 * 2 1 4 4 C 1.50700 * 109.47113 * 119.99985 * 2 1 3 5 5 C 1.38611 * 119.84090 * 74.99474 * 4 2 1 6 6 F 1.35098 * 119.92055 * 0.02641 * 5 4 2 7 7 C 1.38113 * 120.16606 * 180.29441 * 5 4 2 8 8 C 1.39621 * 119.84638 * 359.43842 * 7 5 4 9 9 C 1.47701 * 120.15287 * 180.29352 * 8 7 5 10 10 O 1.21575 * 119.99690 * 216.39963 * 9 8 7 11 11 N 1.34772 * 119.99902 * 36.40261 * 9 8 7 12 12 C 1.47534 * 125.65946 * 4.98710 * 11 9 8 13 13 C 1.55356 * 104.88543 * 156.01995 * 12 11 9 14 14 C 1.53945 * 101.33751 * 36.02569 * 13 12 11 15 15 C 1.52503 * 115.78994 * 94.93602 * 14 13 12 16 16 C 1.54017 * 86.67559 * 93.34116 * 15 14 13 17 17 O 1.42908 * 113.57360 * 269.85612 * 16 15 14 18 18 C 1.52494 * 115.79995 * 196.45224 * 14 13 12 19 19 C 1.47343 * 125.65748 * 185.29744 * 11 9 8 20 20 C 1.39837 * 119.69255 * 0.56308 * 8 7 5 21 21 F 1.35099 * 120.08583 * 179.75063 * 20 8 7 22 22 C 1.38231 * 119.84376 * 255.02255 * 4 2 1 23 23 H 0.96701 * 113.99837 * 300.00661 * 1 2 3 24 24 H 1.09001 * 109.46936 * 240.00221 * 2 1 3 25 25 H 1.48496 * 109.99868 * 178.68214 * 3 2 1 26 26 H 1.48505 * 109.99672 * 299.99919 * 3 2 1 27 27 H 1.07994 * 120.07996 * 179.72671 * 7 5 4 28 28 H 1.09003 * 110.33434 * 274.98590 * 12 11 9 29 29 H 1.08990 * 110.33379 * 37.22987 * 12 11 9 30 30 H 1.09006 * 111.22043 * 277.95486 * 13 12 11 31 31 H 1.08997 * 110.96408 * 153.98665 * 13 12 11 32 32 H 1.09005 * 113.68074 * 207.78398 * 15 14 13 33 33 H 1.09001 * 113.67777 * 338.89815 * 15 14 13 34 34 H 1.09004 * 113.64677 * 139.09451 * 16 15 14 35 35 H 0.96703 * 113.99773 * 277.75736 * 17 16 15 36 36 H 1.09003 * 113.67940 * 21.11318 * 18 14 13 37 37 H 1.09005 * 113.68037 * 152.12808 * 18 14 13 38 38 H 1.09002 * 109.97409 * 301.28894 * 19 11 9 39 39 H 1.09002 * 109.97623 * 62.52699 * 19 11 9 40 40 H 1.08006 * 119.92469 * 359.97438 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.8677 -2.0932 1.3028 6 9 1.3566 -2.7992 0.2706 7 6 2.3206 -2.7507 2.4298 8 6 2.8543 -2.0201 3.4932 9 6 3.3466 -2.7169 4.6989 10 8 3.1914 -2.2164 5.7960 11 7 3.9677 -3.9073 4.5829 12 6 4.3139 -4.5768 3.3146 13 6 5.4957 -5.5202 3.6710 14 6 5.1011 -5.9779 5.0868 15 6 4.3447 -7.2995 5.1702 16 6 5.7160 -7.9680 5.3816 17 8 6.3484 -8.3722 4.1655 18 6 6.2147 -6.6115 5.9139 19 6 4.4079 -4.7591 5.7017 20 6 2.9154 -0.6254 3.4137 21 9 3.4257 0.0897 4.4401 22 6 2.4528 0.0201 2.2818 23 1 -0.3933 0.4418 0.7650 24 1 1.7923 -0.5138 -0.8900 25 1 3.5346 1.7702 0.0321 26 1 1.5615 2.4679 -1.2086 27 1 2.2663 -3.8278 2.4865 28 1 3.4647 -5.1522 2.9459 29 1 4.6264 -3.8428 2.5719 30 1 6.4421 -4.9794 3.6841 31 1 5.5403 -6.3657 2.9846 32 1 3.6843 -7.3723 6.0344 33 1 3.8578 -7.5848 4.2376 34 1 5.7070 -8.7554 6.1354 35 1 6.0398 -9.2234 3.8258 36 1 7.2163 -6.3492 5.5734 37 1 6.0861 -6.4875 6.9892 38 1 5.1076 -4.2118 6.3334 39 1 3.5464 -5.0768 6.2892 40 1 2.4993 1.0973 2.2187 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17058092_12360598.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:11 Heat of formation + Delta-G solvation = -129.694121 kcal Electronic energy + Delta-G solvation = -28303.311664 eV Core-core repulsion = 23915.216609 eV Total energy + Delta-G solvation = -4388.095055 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 326.116 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -50.09136 -50.04784 -42.06674 -40.87239 -39.72012 -37.73208 -37.63401 -35.46986 -33.46139 -31.45476 -31.29229 -29.51259 -27.63083 -27.06421 -24.96637 -24.39358 -23.37140 -22.88184 -21.12025 -20.04994 -19.20067 -18.84070 -18.49634 -18.23220 -17.88199 -17.42306 -17.25700 -16.95479 -16.50867 -16.43956 -16.23102 -15.99219 -15.82464 -15.77234 -15.44424 -15.18935 -15.05286 -14.25452 -14.24563 -14.18182 -13.94691 -13.80768 -13.69122 -13.40200 -13.21065 -13.02300 -12.84687 -12.59057 -12.36332 -12.16652 -11.95166 -11.71708 -11.32553 -11.14898 -10.79603 -10.68622 -10.56615 -9.89606 -9.75321 -5.19296 -0.76613 -0.36044 1.04344 1.39253 1.50940 1.66311 1.83221 2.10594 2.74711 2.81184 2.90814 3.00900 3.15632 3.18670 3.23476 3.38948 3.43262 3.46704 3.55580 3.69617 3.74541 4.00049 4.07907 4.17330 4.24483 4.24960 4.32166 4.35723 4.48504 4.53506 4.61677 4.62021 4.65236 4.68188 4.69733 4.83357 4.86951 4.92982 5.00723 5.08714 5.20976 5.35288 6.26240 6.36711 6.54460 6.93893 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.071 4.071 3 Si 0.689 3.311 4 C -0.104 4.104 5 C 0.112 3.888 6 F -0.121 7.121 7 C -0.098 4.098 8 C -0.132 4.132 9 C 0.575 3.425 10 O -0.514 6.514 11 N -0.611 5.611 12 C 0.093 3.907 13 C -0.105 4.105 14 C -0.089 4.089 15 C -0.158 4.158 16 C 0.081 3.919 17 O -0.549 6.549 18 C -0.118 4.118 19 C 0.122 3.878 20 C 0.153 3.847 21 F -0.110 7.110 22 C -0.127 4.127 23 H 0.381 0.619 24 H 0.122 0.878 25 H -0.251 1.251 26 H -0.246 1.246 27 H 0.156 0.844 28 H 0.074 0.926 29 H 0.080 0.920 30 H 0.081 0.919 31 H 0.097 0.903 32 H 0.093 0.907 33 H 0.078 0.922 34 H 0.071 0.929 35 H 0.383 0.617 36 H 0.083 0.917 37 H 0.100 0.900 38 H 0.077 0.923 39 H 0.074 0.926 40 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.443 -2.939 -0.561 3.024 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.182 4.182 3 Si 0.589 3.411 4 C -0.106 4.106 5 C 0.092 3.908 6 F -0.099 7.099 7 C -0.117 4.117 8 C -0.136 4.136 9 C 0.363 3.637 10 O -0.389 6.389 11 N -0.346 5.346 12 C -0.030 4.030 13 C -0.142 4.142 14 C -0.090 4.090 15 C -0.195 4.195 16 C 0.022 3.978 17 O -0.355 6.355 18 C -0.156 4.156 19 C 0.001 3.999 20 C 0.132 3.868 21 F -0.088 7.088 22 C -0.146 4.146 23 H 0.229 0.771 24 H 0.139 0.861 25 H -0.175 1.175 26 H -0.170 1.170 27 H 0.173 0.827 28 H 0.092 0.908 29 H 0.099 0.901 30 H 0.100 0.900 31 H 0.116 0.884 32 H 0.112 0.888 33 H 0.096 0.904 34 H 0.089 0.911 35 H 0.230 0.770 36 H 0.102 0.898 37 H 0.118 0.882 38 H 0.095 0.905 39 H 0.092 0.908 40 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges 1.206 -1.736 -0.849 2.278 hybrid contribution -0.305 -1.239 -0.241 1.299 sum 0.902 -2.975 -1.090 3.294 Atomic orbital electron populations 1.86590 1.16101 1.81633 1.49192 1.25138 0.85980 1.10711 0.96326 0.94807 0.81491 0.76815 0.88028 1.20495 0.99767 0.92684 0.97668 1.17226 0.98833 0.88836 0.85875 1.91581 1.84242 1.78053 1.56025 1.21369 0.97874 1.01670 0.90774 1.19766 1.05276 0.92381 0.96180 1.17497 0.78276 0.79832 0.88096 1.90887 1.56288 1.64764 1.26987 1.48399 1.58356 1.18979 1.08819 1.22719 0.97945 0.95875 0.86447 1.22529 0.97370 0.99151 0.95174 1.21940 0.97205 0.93307 0.96537 1.23578 0.97310 0.95344 1.03290 1.22730 0.92251 0.95936 0.86914 1.86465 1.66172 1.42625 1.40256 1.22906 0.99021 0.93718 0.99910 1.21855 0.99150 0.90014 0.88917 1.17438 0.96096 0.87786 0.85480 1.91633 1.83606 1.77215 1.56342 1.20828 1.00966 1.00891 0.91887 0.77092 0.86078 1.17483 1.17005 0.82668 0.90825 0.90115 0.90001 0.88435 0.88840 0.90355 0.91105 0.76967 0.89820 0.88193 0.90515 0.90770 0.82434 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.22 12.88 -35.23 -0.45 -0.23 16 2 C -0.07 0.07 2.44 36.01 0.09 0.16 16 3 Si 0.69 -1.47 29.90 -169.99 -5.08 -6.55 16 4 C -0.10 0.07 5.27 -104.49 -0.55 -0.48 16 5 C 0.11 0.02 7.23 -39.49 -0.29 -0.26 16 6 F -0.12 -0.19 16.73 2.25 0.04 -0.15 16 7 C -0.10 0.04 8.15 -39.11 -0.32 -0.28 16 8 C -0.13 -0.19 5.42 -104.92 -0.57 -0.76 16 9 C 0.58 1.94 7.39 -12.40 -0.09 1.85 16 10 O -0.51 -3.68 16.46 5.30 0.09 -3.60 16 11 N -0.61 -0.53 3.34 -171.80 -0.57 -1.10 16 12 C 0.09 -0.16 5.23 -2.23 -0.01 -0.17 16 13 C -0.10 0.19 6.01 -24.99 -0.15 0.04 16 14 C -0.09 0.16 0.93 -154.50 -0.14 0.02 16 15 C -0.16 0.43 7.14 -26.46 -0.19 0.24 16 16 C 0.08 -0.19 5.27 -25.70 -0.14 -0.33 16 17 O -0.55 0.92 12.40 -35.23 -0.44 0.49 16 18 C -0.12 0.23 7.23 -26.46 -0.19 0.03 16 19 C 0.12 0.00 6.37 -3.52 -0.02 -0.02 16 20 C 0.15 0.21 7.24 -38.97 -0.28 -0.07 16 21 F -0.11 -0.38 16.14 2.25 0.04 -0.35 16 22 C -0.13 0.14 8.62 -39.57 -0.34 -0.20 16 23 H 0.38 -1.74 8.70 45.56 0.40 -1.35 16 24 H 0.12 -0.06 7.89 -51.93 -0.41 -0.47 16 25 H -0.25 -0.04 7.11 56.52 0.40 0.37 16 26 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 27 H 0.16 -0.31 5.73 -52.49 -0.30 -0.62 16 28 H 0.07 -0.22 6.90 -51.93 -0.36 -0.58 16 29 H 0.08 -0.17 7.26 -51.93 -0.38 -0.55 16 30 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 31 H 0.10 -0.20 7.19 -51.93 -0.37 -0.57 16 32 H 0.09 -0.29 8.01 -51.93 -0.42 -0.70 16 33 H 0.08 -0.22 8.12 -51.93 -0.42 -0.64 16 34 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 35 H 0.38 -2.03 9.12 45.56 0.42 -1.62 16 36 H 0.08 -0.08 8.12 -51.93 -0.42 -0.50 16 37 H 0.10 -0.29 8.14 -51.93 -0.42 -0.71 16 38 H 0.08 0.07 8.09 -51.93 -0.42 -0.35 16 39 H 0.07 0.01 7.87 -51.93 -0.41 -0.40 16 40 H 0.16 -0.58 5.10 -52.48 -0.27 -0.85 16 LS Contribution 334.55 15.07 5.04 5.04 Total: 0.00 -8.89 334.55 -8.37 -17.25 By element: Atomic # 1 Polarization: -6.74 SS G_CDS: -3.83 Total: -10.57 kcal Atomic # 6 Polarization: 2.96 SS G_CDS: -3.19 Total: -0.23 kcal Atomic # 7 Polarization: -0.53 SS G_CDS: -0.57 Total: -1.10 kcal Atomic # 8 Polarization: -2.54 SS G_CDS: -0.80 Total: -3.34 kcal Atomic # 9 Polarization: -0.57 SS G_CDS: 0.07 Total: -0.50 kcal Atomic # 14 Polarization: -1.47 SS G_CDS: -5.08 Total: -6.55 kcal Total LS contribution 5.04 Total: 5.04 kcal Total: -8.89 -8.37 -17.25 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17058092_12360598.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -112.441 kcal (2) G-P(sol) polarization free energy of solvation -8.886 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.327 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.367 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.253 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.694 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds