Wall clock time and date at job start Tue Mar 9 2021 13:05:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86309 * 109.47040 * 2 1 4 4 C 1.50700 * 109.47337 * 119.99808 * 2 1 3 5 5 C 1.35086 * 126.07494 * 255.03009 * 4 2 1 6 6 N 1.35048 * 107.97620 * 179.97438 * 5 4 2 7 7 C 1.46499 * 125.92718 * 179.97438 * 6 5 4 8 8 C 1.50701 * 109.46992 * 125.00149 * 7 6 5 9 9 O 1.21280 * 119.99781 * 0.02562 * 8 7 6 10 10 N 1.34780 * 119.99795 * 179.97438 * 8 7 6 11 11 C 1.47125 * 125.59156 * 0.02832 * 10 8 7 12 12 C 1.54588 * 107.35618 * 180.89783 * 11 10 8 13 13 C 1.53740 * 102.74867 * 20.84370 * 12 11 10 14 14 C 1.52312 * 116.26344 * 197.34127 * 13 12 11 15 15 C 1.54064 * 86.61187 * 216.60723 * 14 13 12 16 16 O 1.42898 * 113.56779 * 269.70164 * 15 14 13 17 17 C 1.52310 * 116.25649 * 95.00257 * 13 12 11 18 18 C 1.47698 * 125.58703 * 179.71789 * 10 8 7 19 19 N 1.40064 * 108.13892 * 0.22640 * 6 5 4 20 20 C 1.31625 * 108.11126 * 359.61634 * 19 6 5 21 21 C 1.48418 * 126.03927 * 180.13127 * 20 19 6 22 22 C 1.39324 * 120.11950 * 145.01507 * 21 20 19 23 23 C 1.38022 * 119.88026 * 179.67836 * 22 21 20 24 24 C 1.38324 * 120.11789 * 0.61796 * 23 22 21 25 25 C 1.38319 * 120.24156 * 359.67233 * 24 23 22 26 26 C 1.38028 * 120.11555 * 0.02562 * 25 24 23 27 27 H 0.96701 * 114.00208 * 60.00228 * 1 2 3 28 28 H 1.09000 * 109.47737 * 239.99779 * 2 1 3 29 29 H 1.48500 * 109.99891 * 298.67894 * 3 2 1 30 30 H 1.48497 * 109.99608 * 59.99660 * 3 2 1 31 31 H 1.07997 * 126.01333 * 359.97438 * 5 4 2 32 32 H 1.09002 * 109.47391 * 5.00140 * 7 6 5 33 33 H 1.09001 * 109.46813 * 245.00196 * 7 6 5 34 34 H 1.09000 * 109.87121 * 300.34366 * 11 10 8 35 35 H 1.08999 * 109.86782 * 61.45582 * 11 10 8 36 36 H 1.08992 * 110.75439 * 139.16334 * 12 11 10 37 37 H 1.09003 * 110.75529 * 262.53049 * 12 11 10 38 38 H 1.08996 * 113.68885 * 331.03693 * 14 13 12 39 39 H 1.09003 * 113.68940 * 102.18293 * 14 13 12 40 40 H 1.08998 * 113.63599 * 138.95678 * 15 14 13 41 41 H 0.96704 * 113.99417 * 277.80085 * 16 15 14 42 42 H 1.09006 * 113.68892 * 257.83140 * 17 13 12 43 43 H 1.09003 * 113.69224 * 28.87132 * 17 13 12 44 44 H 1.08998 * 110.40036 * 276.27269 * 18 10 8 45 45 H 1.09001 * 110.40449 * 38.67670 * 18 10 8 46 46 H 1.08000 * 120.05865 * 359.97187 * 22 21 20 47 47 H 1.08001 * 119.94258 * 180.31145 * 23 22 21 48 48 H 1.08001 * 119.87687 * 179.70122 * 24 23 22 49 49 H 1.07993 * 119.94436 * 180.02562 * 25 24 23 50 50 H 1.08000 * 120.05368 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4624 -0.1248 2.3259 6 7 2.7876 -1.0989 3.2029 7 6 3.3927 -0.9008 4.5223 8 6 2.5387 -1.5649 5.5714 9 8 1.5248 -2.1468 5.2487 10 7 2.9024 -1.5130 6.8682 11 6 4.1023 -0.8441 7.3949 12 6 4.1187 -1.0641 8.9250 13 6 3.2096 -2.2914 9.1010 14 6 2.6768 -2.5394 10.5062 15 6 2.8417 -4.0413 10.2050 16 8 1.6788 -4.6396 9.6291 17 6 3.9079 -3.6434 9.1667 18 6 2.1582 -2.1127 7.9942 19 7 2.4513 -2.3318 2.6296 20 6 1.9300 -2.1027 1.4430 21 6 1.4339 -3.1304 0.4939 22 6 0.3282 -2.8634 -0.3105 23 6 -0.1249 -3.8202 -1.1961 24 6 0.5088 -5.0470 -1.2767 25 6 1.6033 -5.3196 -0.4760 26 6 2.0685 -4.3677 0.4086 27 1 -0.3934 0.4417 -0.7651 28 1 1.7924 -0.5138 -0.8899 29 1 1.5878 2.4586 -1.2243 30 1 1.5613 2.4679 1.2085 31 1 2.6023 0.9357 2.4742 32 1 3.4632 0.1663 4.7332 33 1 4.3902 -1.3401 4.5341 34 1 4.9958 -1.2803 6.9483 35 1 4.0587 0.2225 7.1745 36 1 5.1289 -1.2785 9.2735 37 1 3.7052 -0.1994 9.4441 38 1 3.3355 -2.1759 11.2948 39 1 1.6401 -2.2313 10.6421 40 1 3.2410 -4.6136 11.0423 41 1 1.0052 -4.8918 10.2756 42 1 3.8492 -4.2121 8.2386 43 1 4.9189 -3.5950 9.5713 44 1 1.3649 -1.4425 8.3253 45 1 1.7443 -3.0786 7.7047 46 1 -0.1706 -1.9077 -0.2447 47 1 -0.9789 -3.6124 -1.8238 48 1 0.1480 -5.7946 -1.9675 49 1 2.0948 -6.2789 -0.5431 50 1 2.9235 -4.5814 1.0330 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17058092_12622748.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:19 Heat of formation + Delta-G solvation = 43.493141 kcal Electronic energy + Delta-G solvation = -33607.384713 eV Core-core repulsion = 29183.564473 eV Total energy + Delta-G solvation = -4423.820240 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.173 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -42.36130 -41.84091 -40.10282 -39.50425 -37.83058 -37.58889 -35.37527 -34.66582 -32.28508 -31.79101 -31.46311 -31.20486 -29.65971 -28.07065 -27.01144 -25.82047 -24.81629 -23.67672 -23.23924 -22.74470 -21.43650 -20.95663 -20.26019 -19.89995 -18.55957 -18.40367 -18.27201 -17.85268 -17.39735 -17.23303 -16.51547 -16.26884 -16.11348 -15.86112 -15.69468 -15.66510 -15.52699 -15.03988 -14.90819 -14.63058 -14.44410 -14.19060 -14.11422 -13.99457 -13.85128 -13.66210 -13.55444 -13.51115 -13.25303 -13.02550 -12.97781 -12.71562 -12.59735 -12.26740 -11.94873 -11.87925 -11.70223 -11.67478 -11.34787 -11.30099 -11.07470 -10.74422 -10.45740 -10.27242 -9.69917 -9.61174 -9.54788 -9.08276 -4.94486 0.33316 0.74153 0.88516 1.30872 1.37559 1.55689 1.61102 1.90030 1.93192 2.00741 2.94847 3.09660 3.13959 3.23605 3.34371 3.40892 3.55047 3.59469 3.66935 3.72100 3.80108 3.84749 3.89129 4.01592 4.14793 4.17443 4.25533 4.26256 4.30721 4.43395 4.45069 4.53015 4.53139 4.64595 4.70089 4.70939 4.71925 4.76864 4.83313 4.90182 4.95392 4.98374 4.99298 5.10330 5.15086 5.20050 5.23201 5.40686 5.52650 5.82764 5.85794 5.88053 5.95374 6.29109 6.39488 6.55658 6.63030 6.81159 7.11267 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.036 4.036 3 Si 0.683 3.317 4 C -0.205 4.205 5 C 0.066 3.934 6 N -0.359 5.359 7 C 0.123 3.877 8 C 0.514 3.486 9 O -0.501 6.501 10 N -0.620 5.620 11 C 0.095 3.905 12 C -0.119 4.119 13 C -0.090 4.090 14 C -0.154 4.154 15 C 0.079 3.921 16 O -0.549 6.549 17 C -0.119 4.119 18 C 0.136 3.864 19 N -0.249 5.249 20 C 0.132 3.868 21 C -0.017 4.017 22 C -0.102 4.102 23 C -0.126 4.126 24 C -0.113 4.113 25 C -0.126 4.126 26 C -0.091 4.091 27 H 0.377 0.623 28 H 0.075 0.925 29 H -0.259 1.259 30 H -0.255 1.255 31 H 0.178 0.822 32 H 0.126 0.874 33 H 0.118 0.882 34 H 0.072 0.928 35 H 0.071 0.929 36 H 0.087 0.913 37 H 0.082 0.918 38 H 0.096 0.904 39 H 0.078 0.922 40 H 0.070 0.930 41 H 0.383 0.617 42 H 0.080 0.920 43 H 0.099 0.901 44 H 0.069 0.931 45 H 0.092 0.908 46 H 0.152 0.848 47 H 0.124 0.876 48 H 0.122 0.878 49 H 0.124 0.876 50 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.470 4.171 3.614 8.504 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.147 4.147 3 Si 0.584 3.416 4 C -0.216 4.216 5 C -0.079 4.079 6 N -0.140 5.140 7 C -0.003 4.003 8 C 0.299 3.701 9 O -0.374 6.374 10 N -0.357 5.357 11 C -0.028 4.028 12 C -0.157 4.157 13 C -0.091 4.091 14 C -0.193 4.193 15 C 0.019 3.981 16 O -0.354 6.354 17 C -0.156 4.156 18 C 0.014 3.986 19 N -0.069 5.069 20 C -0.034 4.034 21 C -0.019 4.019 22 C -0.121 4.121 23 C -0.144 4.144 24 C -0.131 4.131 25 C -0.144 4.144 26 C -0.110 4.110 27 H 0.225 0.775 28 H 0.093 0.907 29 H -0.184 1.184 30 H -0.180 1.180 31 H 0.195 0.805 32 H 0.144 0.856 33 H 0.135 0.865 34 H 0.091 0.909 35 H 0.090 0.910 36 H 0.105 0.895 37 H 0.100 0.900 38 H 0.114 0.886 39 H 0.097 0.903 40 H 0.088 0.912 41 H 0.231 0.769 42 H 0.098 0.902 43 H 0.117 0.883 44 H 0.087 0.913 45 H 0.110 0.890 46 H 0.169 0.831 47 H 0.142 0.858 48 H 0.140 0.860 49 H 0.142 0.858 50 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges 6.518 3.660 4.372 8.660 hybrid contribution -1.517 0.501 -0.305 1.626 sum 5.001 4.161 4.067 7.673 Atomic orbital electron populations 1.86584 1.18615 1.78998 1.49808 1.23966 0.83623 1.10062 0.97005 0.95228 0.91426 0.74439 0.80535 1.19228 1.11930 0.92465 0.97973 1.22189 1.00426 0.95278 0.89976 1.47801 1.48852 1.04382 1.12961 1.21464 0.96986 1.03239 0.78580 1.20151 0.86578 0.81569 0.81782 1.90855 1.25141 1.41675 1.79733 1.48521 1.25918 1.55631 1.05644 1.22190 0.87948 0.97413 0.95230 1.22481 1.00807 0.98208 0.94208 1.21893 0.96421 0.95143 0.95610 1.23427 1.02538 0.97553 0.95738 1.22809 0.87368 0.92115 0.95803 1.86505 1.29600 1.81462 1.37877 1.22902 0.97382 0.95042 1.00296 1.21829 0.93126 0.99648 0.84020 1.77787 1.19280 1.01771 1.08068 1.20624 0.98180 0.92360 0.92230 1.17778 0.96547 0.92029 0.95554 1.21885 0.95074 1.01030 0.94140 1.21118 1.00289 0.93773 0.99257 1.21280 0.95802 0.97064 0.99000 1.21082 0.97308 0.99324 0.96700 1.21227 0.99715 0.92285 0.97801 0.77526 0.90710 1.18399 1.17972 0.80519 0.85576 0.86462 0.90930 0.91026 0.89463 0.89956 0.88562 0.90303 0.91187 0.76927 0.90178 0.88254 0.91267 0.88994 0.83126 0.85840 0.86023 0.85813 0.85817 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.00 10.08 -35.23 -0.36 -1.36 16 2 C -0.04 -0.04 1.99 36.01 0.07 0.03 16 3 Si 0.68 -0.57 30.78 -169.99 -5.23 -5.81 16 4 C -0.20 -0.75 5.37 -104.76 -0.56 -1.32 16 5 C 0.07 0.14 9.96 -17.26 -0.17 -0.03 16 6 N -0.36 -1.29 3.40 -62.58 -0.21 -1.51 16 7 C 0.12 -0.01 6.17 -5.19 -0.03 -0.04 16 8 C 0.51 1.82 7.88 -10.98 -0.09 1.73 16 9 O -0.50 -4.57 15.99 5.56 0.09 -4.48 16 10 N -0.62 -0.56 3.34 -170.80 -0.57 -1.13 16 11 C 0.10 -0.29 6.50 -2.87 -0.02 -0.31 16 12 C -0.12 0.41 6.34 -25.51 -0.16 0.25 16 13 C -0.09 0.13 0.93 -154.51 -0.14 -0.01 16 14 C -0.15 0.36 7.28 -26.53 -0.19 0.16 16 15 C 0.08 -0.09 5.27 -25.67 -0.14 -0.23 16 16 O -0.55 -0.34 12.49 -35.23 -0.44 -0.78 16 17 C -0.12 0.12 7.23 -26.53 -0.19 -0.07 16 18 C 0.14 0.21 5.97 -3.02 -0.02 0.19 16 19 N -0.25 -1.74 11.65 33.43 0.39 -1.35 16 20 C 0.13 0.81 6.74 -82.78 -0.56 0.25 16 21 C -0.02 -0.10 5.80 -104.90 -0.61 -0.70 16 22 C -0.10 -0.45 8.94 -39.26 -0.35 -0.80 16 23 C -0.13 -0.38 10.03 -39.63 -0.40 -0.78 16 24 C -0.11 -0.30 10.04 -39.52 -0.40 -0.70 16 25 C -0.13 -0.41 10.03 -39.63 -0.40 -0.80 16 26 C -0.09 -0.43 9.75 -39.26 -0.38 -0.81 16 27 H 0.38 -0.90 8.74 45.56 0.40 -0.50 16 28 H 0.07 0.02 7.84 -51.93 -0.41 -0.39 16 29 H -0.26 -0.29 7.11 56.52 0.40 0.11 16 30 H -0.26 -0.40 7.04 56.52 0.40 -0.01 16 31 H 0.18 -0.26 6.36 -52.49 -0.33 -0.59 16 32 H 0.13 -0.52 8.07 -51.93 -0.42 -0.94 16 33 H 0.12 -0.28 8.14 -51.93 -0.42 -0.71 16 34 H 0.07 -0.30 8.14 -51.93 -0.42 -0.73 16 35 H 0.07 -0.33 8.14 -51.93 -0.42 -0.76 16 36 H 0.09 -0.40 7.99 -51.93 -0.42 -0.82 16 37 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 38 H 0.10 -0.35 8.14 -51.93 -0.42 -0.77 16 39 H 0.08 -0.15 8.12 -51.93 -0.42 -0.57 16 40 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 41 H 0.38 -1.26 9.12 45.56 0.42 -0.84 16 42 H 0.08 0.11 8.13 -51.93 -0.42 -0.32 16 43 H 0.10 -0.28 8.05 -51.93 -0.42 -0.70 16 44 H 0.07 0.12 8.14 -51.93 -0.42 -0.31 16 45 H 0.09 0.42 7.15 -51.93 -0.37 0.05 16 46 H 0.15 0.60 4.52 -52.49 -0.24 0.36 16 47 H 0.12 0.11 8.06 -52.49 -0.42 -0.32 16 48 H 0.12 0.06 8.06 -52.49 -0.42 -0.36 16 49 H 0.12 0.14 8.06 -52.49 -0.42 -0.28 16 50 H 0.12 0.53 8.06 -52.49 -0.42 0.11 16 LS Contribution 407.41 15.07 6.14 6.14 Total: 0.00 -13.46 407.41 -11.41 -24.87 By element: Atomic # 1 Polarization: -4.10 SS G_CDS: -6.48 Total: -10.58 kcal Atomic # 6 Polarization: 0.73 SS G_CDS: -4.73 Total: -4.01 kcal Atomic # 7 Polarization: -3.59 SS G_CDS: -0.39 Total: -3.99 kcal Atomic # 8 Polarization: -5.92 SS G_CDS: -0.71 Total: -6.62 kcal Atomic # 14 Polarization: -0.57 SS G_CDS: -5.23 Total: -5.81 kcal Total LS contribution 6.14 Total: 6.14 kcal Total: -13.46 -11.41 -24.87 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17058092_12622748.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 68.360 kcal (2) G-P(sol) polarization free energy of solvation -13.456 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 54.904 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.411 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.866 kcal (6) G-S(sol) free energy of system = (1) + (5) 43.493 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds