Wall clock time and date at job start Tue Mar 9 2021 13:06:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86302 * 109.47371 * 2 1 4 4 C 1.50697 * 109.47360 * 120.00132 * 2 1 3 5 5 C 1.38267 * 119.94354 * 64.99771 * 4 2 1 6 6 C 1.38151 * 120.05677 * 180.02562 * 5 4 2 7 7 C 1.38733 * 119.94004 * 0.02562 * 6 5 4 8 8 O 1.35904 * 120.05128 * 180.02562 * 7 6 5 9 9 C 1.42903 * 116.99628 * 180.02562 * 8 7 6 10 10 C 1.50701 * 109.46878 * 179.97438 * 9 8 7 11 11 O 1.21280 * 119.99781 * 0.02562 * 10 9 8 12 12 N 1.34780 * 119.99795 * 179.97438 * 10 9 8 13 13 C 1.47125 * 125.59156 * 0.02832 * 12 10 9 14 14 C 1.54590 * 107.35660 * 180.93122 * 13 12 10 15 15 C 1.53750 * 102.74797 * 20.85094 * 14 13 12 16 16 C 1.52311 * 116.26121 * 197.34685 * 15 14 13 17 17 C 1.54059 * 86.60934 * 216.59945 * 16 15 14 18 18 O 1.42898 * 113.56797 * 269.69970 * 17 16 15 19 19 C 1.52306 * 116.26357 * 95.00000 * 15 14 13 20 20 C 1.47707 * 125.58899 * 179.71791 * 12 10 9 21 21 C 1.38730 * 119.89273 * 0.27301 * 7 6 5 22 22 C 1.38147 * 119.94222 * 359.47199 * 21 7 6 23 23 H 0.96694 * 114.00684 * 59.99292 * 1 2 3 24 24 H 1.08998 * 109.46812 * 240.00421 * 2 1 3 25 25 H 1.48498 * 109.99860 * 60.00118 * 3 2 1 26 26 H 1.48492 * 110.00160 * 181.32434 * 3 2 1 27 27 H 1.08003 * 119.97499 * 359.97438 * 5 4 2 28 28 H 1.07997 * 120.02828 * 179.97438 * 6 5 4 29 29 H 1.09002 * 109.47382 * 59.99787 * 9 8 7 30 30 H 1.09001 * 109.46938 * 299.99774 * 9 8 7 31 31 H 1.08999 * 109.87064 * 300.37672 * 13 12 10 32 32 H 1.08999 * 109.86723 * 61.49494 * 13 12 10 33 33 H 1.09001 * 110.75214 * 139.15925 * 14 13 12 34 34 H 1.08994 * 110.75865 * 262.52846 * 14 13 12 35 35 H 1.09004 * 113.68809 * 331.02574 * 16 15 14 36 36 H 1.08994 * 113.68981 * 102.17327 * 16 15 14 37 37 H 1.09002 * 113.63252 * 138.95182 * 17 16 15 38 38 H 0.96705 * 113.99527 * 277.80482 * 18 17 16 39 39 H 1.09003 * 113.68885 * 257.83009 * 19 15 14 40 40 H 1.09006 * 113.68519 * 28.86858 * 19 15 14 41 41 H 1.08999 * 110.39409 * 276.24038 * 20 12 10 42 42 H 1.09002 * 110.39202 * 38.64048 * 20 12 10 43 43 H 1.07997 * 120.03088 * 179.72386 * 21 7 6 44 44 H 1.07999 * 119.97444 * 180.22577 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6840 -2.0605 1.3972 6 6 2.1430 -2.7140 2.5245 7 6 2.8522 -2.0142 3.4899 8 8 3.3053 -2.6549 4.5995 9 6 4.0275 -1.8713 5.5516 10 6 4.4465 -2.7445 6.7062 11 8 4.1558 -3.9219 6.7128 12 7 5.1453 -2.2170 7.7310 13 6 5.5626 -0.8112 7.8490 14 6 6.3550 -0.6747 9.1694 15 6 6.7893 -2.1215 9.4556 16 6 7.2391 -2.4210 10.8796 17 6 8.2834 -3.3650 10.2538 18 8 7.8165 -4.7056 10.0905 19 6 8.1788 -2.5161 8.9726 20 6 5.6120 -2.9543 8.9227 21 6 3.0937 -0.6583 3.3232 22 6 2.6372 -0.0106 2.1916 23 1 -0.3934 0.4417 -0.7649 24 1 1.7922 -0.5138 -0.8900 25 1 1.5616 2.4679 1.2085 26 1 3.5346 1.7703 -0.0322 27 1 1.1308 -2.6046 0.6459 28 1 1.9492 -3.7685 2.6544 29 1 3.3903 -1.0664 5.9178 30 1 4.9121 -1.4470 5.0767 31 1 6.1985 -0.5414 7.0058 32 1 4.6851 -0.1652 7.8753 33 1 7.2236 -0.0303 9.0337 34 1 5.7146 -0.2985 9.9671 35 1 7.6752 -1.5626 11.3908 36 1 6.4866 -2.9351 11.4775 37 1 9.2614 -3.3133 10.7322 38 1 7.8793 -5.2442 10.8913 39 1 8.1728 -3.1057 8.0558 40 1 8.8828 -1.6845 8.9375 41 1 4.8181 -3.0147 9.6671 42 1 5.9492 -3.9526 8.6438 43 1 3.6417 -0.1104 4.0755 44 1 2.8281 1.0442 2.0596 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17058092_2989410.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:06:42 Heat of formation + Delta-G solvation = -81.268835 kcal Electronic energy + Delta-G solvation = -26598.862942 eV Core-core repulsion = 22677.555905 eV Total energy + Delta-G solvation = -3921.307036 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.150 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -42.03605 -41.45059 -40.27291 -39.00657 -37.68938 -37.19969 -35.41671 -32.66356 -31.99170 -31.56001 -30.43388 -28.32399 -26.88712 -26.20967 -24.87992 -23.96638 -22.65173 -22.31200 -20.68946 -19.86353 -19.71137 -18.47564 -18.33863 -17.91067 -17.68313 -17.55393 -16.82361 -16.76937 -16.37668 -16.07992 -15.72700 -15.57748 -15.42301 -15.30904 -14.59813 -14.58163 -14.38112 -14.08634 -13.98586 -13.86894 -13.66300 -13.61612 -13.49761 -13.08772 -12.82916 -12.54329 -12.52265 -12.28746 -12.05616 -11.90422 -11.82994 -11.53746 -11.26873 -11.14017 -10.62170 -10.28587 -10.21407 -9.88790 -9.38728 -4.92076 0.08270 0.13455 1.22248 1.25692 1.32219 1.66246 1.97118 2.31014 2.46607 3.05433 3.17344 3.33917 3.39356 3.43972 3.54426 3.59834 3.69633 3.77740 3.79229 3.85887 3.92002 3.94282 4.10588 4.15685 4.26636 4.28712 4.38078 4.42857 4.53164 4.56101 4.64152 4.74026 4.77105 4.78222 4.83834 4.88872 4.97394 5.00186 5.04734 5.05535 5.17962 5.24649 5.27534 5.33412 5.52774 6.08851 6.24229 6.83022 6.85081 6.93044 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.566 6.566 2 C -0.078 4.078 3 Si 0.775 3.225 4 C -0.128 4.128 5 C -0.055 4.055 6 C -0.160 4.160 7 C 0.119 3.881 8 O -0.317 6.317 9 C 0.047 3.953 10 C 0.522 3.478 11 O -0.576 6.576 12 N -0.613 5.613 13 C 0.084 3.916 14 C -0.112 4.112 15 C -0.088 4.088 16 C -0.143 4.143 17 C 0.070 3.930 18 O -0.577 6.577 19 C -0.121 4.121 20 C 0.131 3.869 21 C -0.201 4.201 22 C -0.097 4.097 23 H 0.403 0.597 24 H 0.092 0.908 25 H -0.293 1.293 26 H -0.287 1.287 27 H 0.148 0.852 28 H 0.136 0.864 29 H 0.121 0.879 30 H 0.121 0.879 31 H 0.089 0.911 32 H 0.091 0.909 33 H 0.110 0.890 34 H 0.092 0.908 35 H 0.119 0.881 36 H 0.073 0.927 37 H 0.086 0.914 38 H 0.396 0.604 39 H 0.050 0.950 40 H 0.124 0.876 41 H 0.067 0.933 42 H 0.057 0.943 43 H 0.159 0.841 44 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.837 9.289 0.556 10.066 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.376 6.376 2 C -0.188 4.188 3 Si 0.681 3.319 4 C -0.128 4.128 5 C -0.073 4.073 6 C -0.179 4.179 7 C 0.074 3.926 8 O -0.230 6.230 9 C -0.031 4.031 10 C 0.311 3.689 11 O -0.455 6.455 12 N -0.348 5.348 13 C -0.037 4.037 14 C -0.149 4.149 15 C -0.089 4.089 16 C -0.181 4.181 17 C 0.011 3.989 18 O -0.386 6.386 19 C -0.158 4.158 20 C 0.009 3.991 21 C -0.220 4.220 22 C -0.114 4.114 23 H 0.254 0.746 24 H 0.110 0.890 25 H -0.221 1.221 26 H -0.214 1.214 27 H 0.166 0.834 28 H 0.154 0.846 29 H 0.139 0.861 30 H 0.139 0.861 31 H 0.108 0.892 32 H 0.110 0.890 33 H 0.129 0.871 34 H 0.110 0.890 35 H 0.138 0.862 36 H 0.092 0.908 37 H 0.104 0.896 38 H 0.246 0.754 39 H 0.068 0.932 40 H 0.142 0.858 41 H 0.085 0.915 42 H 0.076 0.924 43 H 0.176 0.824 44 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges 4.068 8.923 0.900 9.848 hybrid contribution 0.065 -1.132 0.900 1.448 sum 4.133 7.791 1.800 9.001 Atomic orbital electron populations 1.86447 1.17357 1.82429 1.51348 1.24828 0.85792 1.11239 0.96908 0.94301 0.77391 0.75366 0.84873 1.19694 1.01242 0.94713 0.97156 1.21032 0.96159 0.93692 0.96378 1.20740 1.01625 1.01417 0.94083 1.19197 0.95047 0.91594 0.86728 1.86132 1.69250 1.38161 1.29462 1.22631 0.99040 0.93329 0.88094 1.20193 0.77909 0.87636 0.83177 1.90754 1.56468 1.18787 1.79509 1.48551 1.53829 1.12668 1.19756 1.22573 1.00505 0.80052 1.00601 1.22538 1.01221 0.95150 0.95994 1.21849 0.93476 0.95659 0.97943 1.23409 0.99212 1.00963 0.94490 1.22997 0.96788 0.81791 0.97348 1.86471 1.87413 1.23364 1.41306 1.22994 0.96353 0.99494 0.96986 1.21858 0.95550 0.95781 0.85947 1.21379 1.06500 0.93210 1.00894 1.20898 0.97799 0.99125 0.93588 0.74606 0.88989 1.22109 1.21376 0.83386 0.84565 0.86115 0.86123 0.89245 0.89039 0.87139 0.88972 0.86236 0.90797 0.89641 0.75368 0.93155 0.85778 0.91491 0.92440 0.82384 0.85465 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -0.21 12.81 -148.98 -1.91 -2.12 16 2 C -0.08 0.01 2.79 71.24 0.20 0.21 16 3 Si 0.78 -1.99 29.85 68.60 2.05 0.06 16 4 C -0.13 -0.74 5.38 -19.85 -0.11 -0.85 16 5 C -0.05 -0.35 9.68 22.26 0.22 -0.13 16 6 C -0.16 -1.39 9.99 22.37 0.22 -1.16 16 7 C 0.12 1.04 6.69 22.51 0.15 1.19 16 8 O -0.32 -3.60 9.67 -73.43 -0.71 -4.31 16 9 C 0.05 0.15 4.41 71.24 0.31 0.47 16 10 C 0.52 5.29 7.93 87.66 0.69 5.98 16 11 O -0.58 -12.53 16.77 16.01 0.27 -12.26 16 12 N -0.61 -2.22 3.34 -812.59 -2.71 -4.93 16 13 C 0.08 -0.51 6.50 86.80 0.56 0.05 16 14 C -0.11 0.93 6.34 31.39 0.20 1.13 16 15 C -0.09 0.28 0.92 -52.17 -0.05 0.23 16 16 C -0.14 0.81 7.28 30.72 0.22 1.04 16 17 C 0.07 -0.19 5.27 31.28 0.16 -0.03 16 18 O -0.58 -1.26 12.50 -148.98 -1.86 -3.12 16 19 C -0.12 0.29 7.23 30.72 0.22 0.52 16 20 C 0.13 0.62 5.97 86.40 0.52 1.13 16 21 C -0.20 -0.89 9.04 22.37 0.20 -0.69 16 22 C -0.10 -0.53 8.66 22.26 0.19 -0.33 16 23 H 0.40 -4.17 8.74 -74.06 -0.65 -4.81 16 24 H 0.09 -0.37 7.96 -2.39 -0.02 -0.39 16 25 H -0.29 -1.26 7.04 99.48 0.70 -0.55 16 26 H -0.29 -0.71 7.11 99.48 0.71 0.00 16 27 H 0.15 0.42 8.06 -2.91 -0.02 0.40 16 28 H 0.14 1.06 8.06 -2.91 -0.02 1.04 16 29 H 0.12 -0.34 7.65 -2.39 -0.02 -0.36 16 30 H 0.12 -0.34 7.67 -2.39 -0.02 -0.36 16 31 H 0.09 -0.82 8.14 -2.39 -0.02 -0.84 16 32 H 0.09 -0.86 8.14 -2.39 -0.02 -0.88 16 33 H 0.11 -1.36 7.99 -2.39 -0.02 -1.38 16 34 H 0.09 -0.88 8.14 -2.39 -0.02 -0.90 16 35 H 0.12 -1.19 8.14 -2.38 -0.02 -1.21 16 36 H 0.07 -0.31 8.12 -2.39 -0.02 -0.33 16 37 H 0.09 -0.52 8.14 -2.39 -0.02 -0.54 16 38 H 0.40 -2.31 9.12 -74.05 -0.68 -2.99 16 39 H 0.05 0.19 8.13 -2.39 -0.02 0.17 16 40 H 0.12 -0.95 8.05 -2.38 -0.02 -0.97 16 41 H 0.07 0.34 8.14 -2.39 -0.02 0.32 16 42 H 0.06 0.69 7.15 -2.39 -0.02 0.68 16 43 H 0.16 -0.40 6.30 -2.91 -0.02 -0.42 16 44 H 0.13 0.42 4.86 -2.91 -0.01 0.41 16 Total: 0.00 -30.63 359.88 -1.21 -31.84 By element: Atomic # 1 Polarization: -13.65 SS G_CDS: -0.26 Total: -13.91 kcal Atomic # 6 Polarization: 4.83 SS G_CDS: 3.93 Total: 8.76 kcal Atomic # 7 Polarization: -2.22 SS G_CDS: -2.71 Total: -4.93 kcal Atomic # 8 Polarization: -17.60 SS G_CDS: -4.21 Total: -21.82 kcal Atomic # 14 Polarization: -1.99 SS G_CDS: 2.05 Total: 0.06 kcal Total: -30.63 -1.21 -31.84 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17058092_2989410.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -49.424 kcal (2) G-P(sol) polarization free energy of solvation -30.635 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.059 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.210 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.845 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.269 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds