Wall clock time and date at job start Tue Mar 9 2021 13:07:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86304 * 109.47076 * 2 1 4 4 C 1.50694 * 109.47095 * 239.99743 * 2 1 3 5 5 C 1.38252 * 119.97154 * 120.02414 * 4 2 1 6 6 C 1.38289 * 120.11157 * 179.97438 * 5 4 2 7 7 C 1.38124 * 120.05441 * 359.67615 * 6 5 4 8 8 C 1.38759 * 119.94308 * 0.59766 * 7 6 5 9 9 O 1.35897 * 120.05250 * 179.69632 * 8 7 6 10 10 C 1.42897 * 117.00465 * 359.72986 * 9 8 7 11 11 C 1.50701 * 109.47336 * 179.97438 * 10 9 8 12 12 O 1.21280 * 119.99817 * 359.97438 * 11 10 9 13 13 N 1.34782 * 119.99839 * 179.97438 * 11 10 9 14 14 C 1.47124 * 125.59044 * 359.97438 * 13 11 10 15 15 C 1.54587 * 107.35775 * 179.08674 * 14 13 11 16 16 C 1.53752 * 102.74851 * 339.14914 * 15 14 13 17 17 C 1.52312 * 116.25568 * 265.00318 * 16 15 14 18 18 C 1.54055 * 86.60848 * 216.59551 * 17 16 15 19 19 O 1.42893 * 113.57038 * 269.69997 * 18 17 16 20 20 C 1.52306 * 116.26274 * 162.65712 * 16 15 14 21 21 C 1.47703 * 125.58847 * 179.97438 * 13 11 10 22 22 C 1.38160 * 119.97514 * 300.00071 * 4 2 1 23 23 H 0.96698 * 113.99749 * 59.99788 * 1 2 3 24 24 H 1.08998 * 109.47012 * 119.99821 * 2 1 3 25 25 H 1.48498 * 110.00109 * 59.99708 * 3 2 1 26 26 H 1.48500 * 109.99830 * 181.31556 * 3 2 1 27 27 H 1.07996 * 119.94093 * 359.97438 * 5 4 2 28 28 H 1.07996 * 119.97108 * 179.97438 * 6 5 4 29 29 H 1.07996 * 120.02470 * 180.32139 * 7 6 5 30 30 H 1.09004 * 109.47292 * 59.99370 * 10 9 8 31 31 H 1.09000 * 109.47085 * 299.99965 * 10 9 8 32 32 H 1.09003 * 109.87123 * 59.64484 * 14 13 11 33 33 H 1.08999 * 109.87212 * 298.52946 * 14 13 11 34 34 H 1.08997 * 110.75839 * 97.46696 * 15 14 13 35 35 H 1.09000 * 110.75423 * 220.84014 * 15 14 13 36 36 H 1.08995 * 113.69070 * 331.02173 * 17 16 15 37 37 H 1.08997 * 113.69065 * 102.16978 * 17 16 15 38 38 H 1.09000 * 113.63531 * 138.95452 * 18 17 16 39 39 H 0.96705 * 114.00014 * 277.79747 * 19 18 17 40 40 H 1.09003 * 113.68778 * 257.82275 * 20 16 15 41 41 H 1.08996 * 113.69027 * 28.87248 * 20 16 15 42 42 H 1.09000 * 110.39902 * 321.33825 * 21 13 11 43 43 H 1.08998 * 110.39589 * 83.63037 * 21 13 11 44 44 H 1.08005 * 120.02982 * 0.04096 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.7265 -0.0382 -2.1398 6 6 3.1895 -0.6875 -3.2696 7 6 2.8638 -2.0118 -3.4887 8 6 2.0612 -2.6870 -2.5804 9 8 1.7343 -3.9882 -2.7969 10 6 2.2470 -4.5972 -3.9836 11 6 1.7844 -6.0298 -4.0533 12 8 1.0849 -6.4846 -3.1731 13 7 2.1481 -6.8055 -5.0938 14 6 2.9890 -6.3824 -6.2244 15 6 3.1578 -7.6043 -7.1562 16 6 2.8400 -8.7867 -6.2262 17 6 4.0334 -9.4622 -5.5633 18 6 3.2681 -10.7869 -5.7450 19 8 2.4299 -11.1191 -4.6364 20 6 2.5145 -10.1102 -6.9059 21 6 1.7676 -8.2197 -5.2859 22 6 1.5972 -2.0332 -1.4485 23 1 -0.3933 0.4417 -0.7650 24 1 1.7923 -0.5138 0.8900 25 1 1.5614 2.4680 1.2084 26 1 3.5346 1.7703 -0.0320 27 1 2.9865 0.9958 -1.9676 28 1 3.8102 -0.1600 -3.9788 29 1 3.2299 -2.5198 -4.3686 30 1 3.3365 -4.5680 -3.9654 31 1 1.8836 -4.0548 -4.8565 32 1 3.9635 -6.0571 -5.8600 33 1 2.5030 -5.5695 -6.7639 34 1 2.4482 -7.5610 -7.9824 35 1 4.1807 -7.6688 -7.5271 36 1 4.9510 -9.4028 -6.1485 37 1 4.1745 -9.1774 -4.5208 38 1 3.9001 -11.6169 -6.0607 39 1 2.8966 -11.5444 -3.9040 40 1 1.4493 -10.3400 -6.9296 41 1 2.9972 -10.2351 -7.8752 42 1 1.7793 -8.7491 -4.3332 43 1 0.7818 -8.2887 -5.7459 44 1 0.9757 -2.5579 -0.7379 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17058092_4860298.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:07:20 Heat of formation + Delta-G solvation = -79.975870 kcal Electronic energy + Delta-G solvation = -26650.760126 eV Core-core repulsion = 22729.509157 eV Total energy + Delta-G solvation = -3921.250969 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.150 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -42.00916 -41.34282 -40.12412 -38.88612 -37.62269 -37.16698 -35.40181 -32.48439 -31.94080 -31.39952 -30.11538 -28.15469 -27.04284 -26.74728 -24.75336 -23.67270 -22.77430 -22.37993 -20.52814 -19.94409 -19.35195 -18.51486 -17.96089 -17.75388 -17.42082 -17.33323 -17.00205 -16.74972 -16.26227 -16.11895 -15.90812 -15.75273 -15.15866 -14.90108 -14.82616 -14.67611 -14.31113 -14.15210 -14.08737 -13.80927 -13.69535 -13.49317 -13.20044 -12.95588 -12.91040 -12.56414 -12.52591 -12.15973 -11.93828 -11.91275 -11.80367 -11.65293 -11.31400 -10.89388 -10.71141 -10.48257 -9.91870 -9.74965 -9.26838 -5.02396 0.19501 0.39791 1.25604 1.39359 1.51546 1.64446 1.97911 2.42892 2.66615 2.93189 3.12171 3.19210 3.37935 3.48501 3.53876 3.60057 3.63485 3.73567 3.78024 3.85764 3.87784 4.00500 4.00719 4.13719 4.18143 4.24375 4.36636 4.42581 4.52034 4.54153 4.59672 4.62061 4.67702 4.73696 4.75806 4.83527 4.96162 4.96470 5.08271 5.11682 5.16357 5.23996 5.34353 5.43231 5.64863 6.26840 6.38101 6.59771 6.60221 7.06673 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.071 4.071 3 Si 0.695 3.305 4 C -0.079 4.079 5 C -0.155 4.155 6 C -0.072 4.072 7 C -0.207 4.207 8 C 0.130 3.870 9 O -0.289 6.289 10 C 0.047 3.953 11 C 0.531 3.469 12 O -0.511 6.511 13 N -0.618 5.618 14 C 0.095 3.905 15 C -0.119 4.119 16 C -0.091 4.091 17 C -0.157 4.157 18 C 0.079 3.921 19 O -0.549 6.549 20 C -0.116 4.116 21 C 0.136 3.864 22 C -0.121 4.121 23 H 0.380 0.620 24 H 0.116 0.884 25 H -0.255 1.255 26 H -0.258 1.258 27 H 0.129 0.871 28 H 0.131 0.869 29 H 0.129 0.871 30 H 0.093 0.907 31 H 0.094 0.906 32 H 0.071 0.929 33 H 0.072 0.928 34 H 0.083 0.917 35 H 0.087 0.913 36 H 0.094 0.906 37 H 0.076 0.924 38 H 0.070 0.930 39 H 0.384 0.616 40 H 0.083 0.917 41 H 0.102 0.898 42 H 0.091 0.909 43 H 0.073 0.927 44 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.120 0.955 -7.989 9.537 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.182 4.182 3 Si 0.597 3.403 4 C -0.080 4.080 5 C -0.173 4.173 6 C -0.090 4.090 7 C -0.225 4.225 8 C 0.085 3.915 9 O -0.201 6.201 10 C -0.031 4.031 11 C 0.318 3.682 12 O -0.384 6.384 13 N -0.355 5.355 14 C -0.028 4.028 15 C -0.157 4.157 16 C -0.092 4.092 17 C -0.195 4.195 18 C 0.019 3.981 19 O -0.355 6.355 20 C -0.154 4.154 21 C 0.015 3.985 22 C -0.140 4.140 23 H 0.227 0.773 24 H 0.133 0.867 25 H -0.180 1.180 26 H -0.183 1.183 27 H 0.147 0.853 28 H 0.149 0.851 29 H 0.147 0.853 30 H 0.110 0.890 31 H 0.112 0.888 32 H 0.089 0.911 33 H 0.091 0.909 34 H 0.102 0.898 35 H 0.105 0.895 36 H 0.112 0.888 37 H 0.094 0.906 38 H 0.088 0.912 39 H 0.232 0.768 40 H 0.102 0.898 41 H 0.120 0.880 42 H 0.110 0.890 43 H 0.091 0.909 44 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 4.697 1.193 -6.700 8.268 hybrid contribution 0.840 -0.797 0.111 1.163 sum 5.537 0.396 -6.589 8.615 Atomic orbital electron populations 1.86524 1.16863 1.81714 1.49205 1.25139 0.85447 1.10264 0.97309 0.94636 0.80857 0.77752 0.87097 1.20161 0.97410 0.93801 0.96626 1.20944 1.00904 0.99881 0.95522 1.20901 0.97829 0.93607 0.96704 1.21291 1.03582 0.96630 1.01042 1.19054 0.94738 0.82990 0.94763 1.86169 1.70353 1.22543 1.41042 1.22416 0.99987 0.92064 0.88669 1.19626 0.80901 0.86648 0.81070 1.90799 1.36380 1.74060 1.37201 1.48434 1.52029 1.12848 1.22227 1.22195 0.94912 0.98233 0.87439 1.22490 1.03218 0.92719 0.97279 1.21864 0.96669 0.94241 0.96381 1.23487 0.96979 0.97045 1.01954 1.22810 0.92122 0.94979 0.88184 1.86474 1.37931 1.82220 1.28886 1.22821 1.02456 0.93202 0.96922 1.21806 0.96620 0.79625 1.00475 1.20277 1.02804 0.93920 0.96957 0.77311 0.86679 1.17972 1.18287 0.85341 0.85086 0.85320 0.88959 0.88842 0.91074 0.90946 0.89799 0.89459 0.88799 0.90570 0.91163 0.76836 0.89837 0.87962 0.89045 0.90897 0.84571 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.65 12.77 -35.23 -0.45 -1.10 16 2 C -0.07 -0.04 2.82 36.00 0.10 0.06 16 3 Si 0.69 -0.53 29.79 -169.99 -5.06 -5.59 16 4 C -0.08 -0.09 5.39 -104.65 -0.56 -0.66 16 5 C -0.15 0.02 8.67 -39.56 -0.34 -0.32 16 6 C -0.07 0.04 10.04 -39.60 -0.40 -0.35 16 7 C -0.21 -0.03 9.04 -39.43 -0.36 -0.39 16 8 C 0.13 0.34 6.69 -39.21 -0.26 0.08 16 9 O -0.29 -1.20 9.67 -39.33 -0.38 -1.58 16 10 C 0.05 0.03 4.41 36.01 0.16 0.19 16 11 C 0.53 1.86 7.93 -10.98 -0.09 1.78 16 12 O -0.51 -4.34 16.78 -14.35 -0.24 -4.58 16 13 N -0.62 -0.50 3.34 -170.93 -0.57 -1.07 16 14 C 0.10 -0.27 6.50 -2.87 -0.02 -0.29 16 15 C -0.12 0.42 6.35 -25.51 -0.16 0.26 16 16 C -0.09 0.16 0.93 -154.62 -0.14 0.01 16 17 C -0.16 0.33 7.21 -26.53 -0.19 0.14 16 18 C 0.08 -0.13 5.27 -25.67 -0.14 -0.26 16 19 O -0.55 -0.02 12.48 -35.23 -0.44 -0.46 16 20 C -0.12 0.24 7.28 -26.53 -0.19 0.04 16 21 C 0.14 0.15 5.94 -3.13 -0.02 0.14 16 22 C -0.12 -0.35 9.55 -39.44 -0.38 -0.73 16 23 H 0.38 -1.06 8.70 45.56 0.40 -0.66 16 24 H 0.12 0.13 7.96 -51.93 -0.41 -0.28 16 25 H -0.25 -0.64 7.11 56.52 0.40 -0.23 16 26 H -0.26 -0.36 7.11 56.52 0.40 0.05 16 27 H 0.13 -0.27 4.87 -52.49 -0.26 -0.52 16 28 H 0.13 -0.40 8.06 -52.49 -0.42 -0.82 16 29 H 0.13 -0.30 6.30 -52.49 -0.33 -0.64 16 30 H 0.09 -0.17 7.65 -51.93 -0.40 -0.56 16 31 H 0.09 -0.18 7.67 -51.93 -0.40 -0.58 16 32 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 33 H 0.07 -0.30 8.14 -51.93 -0.42 -0.72 16 34 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 35 H 0.09 -0.41 7.99 -51.93 -0.42 -0.83 16 36 H 0.09 -0.32 8.05 -51.93 -0.42 -0.74 16 37 H 0.08 -0.05 8.12 -51.93 -0.42 -0.47 16 38 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 39 H 0.38 -1.34 9.12 45.56 0.42 -0.92 16 40 H 0.08 -0.07 8.12 -51.93 -0.42 -0.49 16 41 H 0.10 -0.38 8.14 -51.93 -0.42 -0.80 16 42 H 0.09 0.31 7.14 -51.93 -0.37 -0.06 16 43 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 44 H 0.14 0.50 8.06 -52.48 -0.42 0.08 16 LS Contribution 359.72 15.07 5.42 5.42 Total: 0.00 -10.56 359.72 -10.32 -20.89 By element: Atomic # 1 Polarization: -5.99 SS G_CDS: -5.61 Total: -11.60 kcal Atomic # 6 Polarization: 2.68 SS G_CDS: -2.99 Total: -0.31 kcal Atomic # 7 Polarization: -0.50 SS G_CDS: -0.57 Total: -1.07 kcal Atomic # 8 Polarization: -6.22 SS G_CDS: -1.51 Total: -7.73 kcal Atomic # 14 Polarization: -0.53 SS G_CDS: -5.06 Total: -5.59 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -10.56 -10.32 -20.89 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17058092_4860298.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.091 kcal (2) G-P(sol) polarization free energy of solvation -10.562 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -69.652 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.324 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.885 kcal (6) G-S(sol) free energy of system = (1) + (5) -79.976 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds