Wall clock time and date at job start Tue Mar 9 2021 13:07:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.37649 * 125.67294 * 2 1 4 4 C 1.46668 * 126.22476 * 359.73175 * 3 2 1 5 5 O 1.21696 * 120.00336 * 6.81304 * 4 3 2 6 6 N 1.34779 * 119.99821 * 186.80951 * 4 3 2 7 7 C 1.47531 * 125.65724 * 5.65248 * 6 4 3 8 8 C 1.55353 * 104.88765 * 156.01804 * 7 6 4 9 9 C 1.53956 * 101.33372 * 36.02490 * 8 7 6 10 10 C 1.52511 * 115.78753 * 94.93822 * 9 8 7 11 11 C 1.54011 * 86.67913 * 93.33791 * 10 9 8 12 12 O 1.42897 * 113.57644 * 269.85617 * 11 10 9 13 13 C 1.52495 * 115.80163 * 196.44977 * 9 8 7 14 14 C 1.47340 * 125.65933 * 185.96487 * 6 4 3 15 15 C 1.37879 * 107.54702 * 179.73773 * 3 2 1 16 16 C 1.39881 * 107.09276 * 359.97438 * 15 3 2 17 17 Br 1.89101 * 126.07167 * 180.02562 * 16 15 3 18 18 C 1.35501 * 107.85398 * 359.97438 * 16 15 3 19 19 C 1.50697 * 125.56937 * 180.02562 * 18 16 15 20 20 O 1.42901 * 109.47135 * 235.24879 * 19 18 16 21 21 Si 1.86305 * 109.46850 * 115.25451 * 19 18 16 22 22 H 1.08994 * 109.47005 * 84.94174 * 1 2 3 23 23 H 1.09001 * 109.46698 * 204.94370 * 1 2 3 24 24 H 1.08997 * 109.46974 * 324.94138 * 1 2 3 25 25 H 1.08997 * 110.33515 * 274.98429 * 7 6 4 26 26 H 1.08999 * 110.33861 * 37.22718 * 7 6 4 27 27 H 1.09000 * 111.22129 * 277.95972 * 8 7 6 28 28 H 1.09002 * 110.96917 * 153.98185 * 8 7 6 29 29 H 1.08997 * 113.67899 * 207.78629 * 10 9 8 30 30 H 1.09005 * 113.67599 * 338.89203 * 10 9 8 31 31 H 1.09000 * 113.64198 * 139.08618 * 11 10 9 32 32 H 0.96697 * 114.00051 * 277.75698 * 12 11 10 33 33 H 1.09004 * 113.67991 * 21.11454 * 13 9 8 34 34 H 1.09001 * 113.68035 * 152.13044 * 13 9 8 35 35 H 1.09001 * 109.97288 * 301.28317 * 14 6 4 36 36 H 1.09003 * 109.97897 * 62.52756 * 14 6 4 37 37 H 1.08006 * 126.45493 * 179.97438 * 15 3 2 38 38 H 1.08996 * 109.47823 * 355.25183 * 19 18 16 39 39 H 0.96691 * 114.00704 * 300.00628 * 20 19 18 40 40 H 1.48506 * 110.00020 * 184.99776 * 21 19 18 41 41 H 1.48501 * 109.99866 * 306.31427 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1182 0.0000 4 6 1.8120 2.5123 -0.0055 5 8 0.6278 2.7659 0.1143 6 7 2.7048 3.5125 -0.1433 7 6 4.1458 3.3480 -0.4136 8 6 4.5820 4.6824 -1.0788 9 6 3.7127 5.6989 -0.3164 10 6 4.3734 6.3682 0.8842 11 6 4.7755 7.4991 -0.0808 12 8 6.0453 7.2947 -0.7034 13 6 3.5833 7.0756 -0.9593 14 6 2.4048 4.9515 -0.0424 15 6 3.5781 0.6893 0.0060 16 6 3.5529 -0.7093 0.0103 17 35 5.0610 -1.8501 0.0199 18 6 2.2558 -1.1014 0.0074 19 6 1.7714 -2.5284 0.0108 20 8 0.8947 -2.7365 -1.0983 21 14 0.8570 -2.8700 1.5977 22 1 -0.3633 0.0906 -1.0236 23 1 -0.3633 -0.9318 0.4334 24 1 -0.3633 0.8412 0.5903 25 1 4.6903 3.1905 0.5174 26 1 4.3105 2.5137 -1.0955 27 1 4.3475 4.6877 -2.1433 28 1 5.6425 4.8724 -0.9131 29 1 3.6681 6.6800 1.6545 30 1 5.2211 5.8117 1.2840 31 1 4.6696 8.4964 0.3462 32 1 6.7982 7.5586 -0.1571 33 1 3.8022 7.0825 -2.0271 34 1 2.6529 7.5877 -0.7137 35 1 1.6554 5.2285 -0.7838 36 1 2.0432 5.1873 0.9584 37 1 4.4583 1.3152 0.0072 38 1 2.6246 -3.2020 -0.0691 39 1 0.1116 -2.1694 -1.0925 40 1 0.4790 -4.3044 1.6675 41 1 1.7076 -2.5118 2.7612 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17058092_5000100.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:07:29 Heat of formation + Delta-G solvation = -11.439192 kcal Electronic energy + Delta-G solvation = -26405.212885 eV Core-core repulsion = 22528.598307 eV Total energy + Delta-G solvation = -3876.614577 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.057 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -42.94001 -41.77786 -39.88874 -37.92402 -37.65838 -35.52956 -34.43640 -32.38288 -31.27796 -31.02166 -29.34318 -27.50063 -27.07355 -26.67452 -24.77778 -23.04164 -22.27899 -21.48749 -20.41367 -19.78565 -18.51798 -18.32988 -17.71620 -17.57290 -17.15865 -16.88195 -16.38695 -16.20833 -15.84147 -15.77304 -15.23120 -14.91036 -14.59527 -14.45466 -14.25884 -14.20700 -14.03842 -13.89390 -13.81545 -13.56490 -13.36182 -13.20346 -12.90758 -12.71931 -12.48821 -12.23089 -11.91870 -11.87365 -11.64651 -11.28985 -11.23795 -10.97936 -10.85389 -10.74783 -9.81146 -9.76052 -9.19879 -5.26119 0.18442 0.66700 0.92049 1.24246 1.35840 1.56643 1.84134 2.09637 2.21197 2.93501 3.10225 3.16819 3.27106 3.35696 3.44148 3.49563 3.59328 3.60790 3.79832 3.90672 4.07905 4.10659 4.16226 4.23096 4.29655 4.42549 4.43703 4.50130 4.55910 4.64161 4.65664 4.69860 4.72504 4.87461 4.91806 4.96659 5.05187 5.12480 5.21851 5.35047 5.58614 5.81879 6.21215 6.34298 6.57479 7.02674 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.055 3.945 2 N -0.395 5.395 3 C -0.028 4.028 4 C 0.606 3.394 5 O -0.543 6.543 6 N -0.605 5.605 7 C 0.087 3.913 8 C -0.105 4.105 9 C -0.089 4.089 10 C -0.158 4.158 11 C 0.081 3.919 12 O -0.549 6.549 13 C -0.118 4.118 14 C 0.126 3.874 15 C -0.119 4.119 16 C -0.163 4.163 17 Br -0.022 7.022 18 C 0.053 3.947 19 C -0.048 4.048 20 O -0.530 6.530 21 Si 0.674 3.326 22 H 0.092 0.908 23 H 0.086 0.914 24 H 0.117 0.883 25 H 0.076 0.924 26 H 0.090 0.910 27 H 0.081 0.919 28 H 0.097 0.903 29 H 0.092 0.908 30 H 0.078 0.922 31 H 0.070 0.930 32 H 0.382 0.618 33 H 0.083 0.917 34 H 0.099 0.901 35 H 0.076 0.924 36 H 0.073 0.927 37 H 0.166 0.834 38 H 0.138 0.862 39 H 0.372 0.628 40 H -0.237 1.237 41 H -0.244 1.244 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.061 3.938 1.578 4.242 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 N -0.069 5.069 3 C -0.142 4.142 4 C 0.396 3.604 5 O -0.422 6.422 6 N -0.338 5.338 7 C -0.035 4.035 8 C -0.143 4.143 9 C -0.090 4.090 10 C -0.195 4.195 11 C 0.022 3.978 12 O -0.355 6.355 13 C -0.156 4.156 14 C 0.004 3.996 15 C -0.146 4.146 16 C -0.249 4.249 17 Br 0.063 6.937 18 C -0.068 4.068 19 C -0.158 4.158 20 O -0.335 6.335 21 Si 0.571 3.429 22 H 0.110 0.890 23 H 0.104 0.896 24 H 0.135 0.865 25 H 0.094 0.906 26 H 0.108 0.892 27 H 0.100 0.900 28 H 0.115 0.885 29 H 0.111 0.889 30 H 0.097 0.903 31 H 0.088 0.912 32 H 0.230 0.770 33 H 0.102 0.898 34 H 0.117 0.883 35 H 0.094 0.906 36 H 0.091 0.909 37 H 0.183 0.817 38 H 0.155 0.845 39 H 0.220 0.780 40 H -0.160 1.160 41 H -0.167 1.167 Dipole moment (debyes) X Y Z Total from point charges -0.547 2.504 1.761 3.110 hybrid contribution 0.697 0.467 0.179 0.857 sum 0.150 2.971 1.940 3.552 Atomic orbital electron populations 1.22535 0.75261 1.05193 1.05447 1.43639 1.06924 1.03880 1.52427 1.19852 0.89639 0.87476 1.17196 1.16391 0.84641 0.82526 0.76838 1.90817 1.15642 1.84317 1.51438 1.48085 1.09041 1.06048 1.70604 1.22958 0.80482 0.99519 1.00585 1.22553 1.00709 0.91551 0.99509 1.21939 0.94881 0.94540 0.97598 1.23574 1.01330 0.98252 0.96369 1.22724 0.84591 0.96681 0.93833 1.86463 1.15015 1.88137 1.45866 1.22907 0.97336 0.94470 1.00861 1.21823 0.97056 0.78431 1.02253 1.21796 0.95880 0.92993 1.03949 1.20802 0.91132 0.94469 1.18468 1.96669 1.35887 1.62992 1.98198 1.20720 0.89807 0.89809 1.06420 1.24918 0.98630 0.90952 1.01332 1.86624 1.36472 1.64408 1.45976 0.95343 0.87523 0.84867 0.75146 0.88971 0.89557 0.86464 0.90578 0.89211 0.90034 0.88457 0.88912 0.90319 0.91168 0.76976 0.89827 0.88264 0.90602 0.90885 0.81651 0.84527 0.78002 1.16041 1.16719 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.12 8.78 59.85 0.53 0.41 16 2 N -0.39 -0.39 3.13 -115.59 -0.36 -0.75 16 3 C -0.03 -0.06 6.82 -81.98 -0.56 -0.62 16 4 C 0.61 1.73 7.80 -12.86 -0.10 1.63 16 5 O -0.54 -2.75 15.10 5.19 0.08 -2.67 16 6 N -0.60 -0.49 3.34 -172.19 -0.57 -1.07 16 7 C 0.09 -0.12 5.11 -2.23 -0.01 -0.13 16 8 C -0.11 0.18 6.01 -24.98 -0.15 0.03 16 9 C -0.09 0.16 0.93 -154.49 -0.14 0.02 16 10 C -0.16 0.42 7.14 -26.45 -0.19 0.23 16 11 C 0.08 -0.19 5.27 -25.70 -0.14 -0.33 16 12 O -0.55 0.88 12.40 -35.23 -0.44 0.44 16 13 C -0.12 0.23 7.23 -26.46 -0.19 0.04 16 14 C 0.13 -0.03 6.37 -3.53 -0.02 -0.05 16 15 C -0.12 -0.18 9.13 -39.10 -0.36 -0.54 16 16 C -0.16 -0.39 6.53 -39.94 -0.26 -0.65 16 17 Br -0.02 -0.05 33.06 -68.01 -2.25 -2.29 16 18 C 0.05 0.09 5.14 -81.91 -0.42 -0.33 16 19 C -0.05 -0.03 2.87 36.00 0.10 0.07 16 20 O -0.53 -0.27 12.88 -35.23 -0.45 -0.72 16 21 Si 0.67 -0.36 30.23 -169.99 -5.14 -5.50 16 22 H 0.09 -0.29 8.13 -51.93 -0.42 -0.71 16 23 H 0.09 -0.43 4.25 -51.93 -0.22 -0.66 16 24 H 0.12 -0.11 6.49 -51.93 -0.34 -0.45 16 25 H 0.08 -0.17 7.71 -51.93 -0.40 -0.57 16 26 H 0.09 -0.14 5.94 -51.93 -0.31 -0.45 16 27 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 28 H 0.10 -0.18 7.19 -51.93 -0.37 -0.55 16 29 H 0.09 -0.28 8.01 -51.93 -0.42 -0.70 16 30 H 0.08 -0.20 8.12 -51.93 -0.42 -0.62 16 31 H 0.07 -0.22 8.14 -51.93 -0.42 -0.65 16 32 H 0.38 -2.00 9.12 45.56 0.42 -1.58 16 33 H 0.08 -0.08 8.12 -51.93 -0.42 -0.50 16 34 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 35 H 0.08 0.03 8.09 -51.93 -0.42 -0.39 16 36 H 0.07 -0.01 7.87 -51.93 -0.41 -0.42 16 37 H 0.17 -0.08 4.77 -52.48 -0.25 -0.33 16 38 H 0.14 0.18 6.96 -51.93 -0.36 -0.18 16 39 H 0.37 -1.20 6.43 45.56 0.29 -0.91 16 40 H -0.24 -0.40 7.11 56.52 0.40 0.00 16 41 H -0.24 -0.57 7.11 56.52 0.40 -0.17 16 LS Contribution 341.11 15.07 5.14 5.14 Total: 0.00 -8.26 341.11 -10.43 -18.69 By element: Atomic # 1 Polarization: -6.53 SS G_CDS: -4.52 Total: -11.05 kcal Atomic # 6 Polarization: 1.70 SS G_CDS: -1.91 Total: -0.22 kcal Atomic # 7 Polarization: -0.88 SS G_CDS: -0.94 Total: -1.82 kcal Atomic # 8 Polarization: -2.14 SS G_CDS: -0.81 Total: -2.95 kcal Atomic # 14 Polarization: -0.36 SS G_CDS: -5.14 Total: -5.50 kcal Atomic # 35 Polarization: -0.05 SS G_CDS: -2.25 Total: -2.29 kcal Total LS contribution 5.14 Total: 5.14 kcal Total: -8.26 -10.43 -18.69 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17058092_5000100.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.252 kcal (2) G-P(sol) polarization free energy of solvation -8.265 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.013 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.426 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.691 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.439 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds