Wall clock time and date at job start Tue Mar 9 2021 13:07:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.35959 * 117.00025 * 2 1 4 4 C 1.39454 * 120.12121 * 180.02562 * 3 2 1 5 5 O 1.34767 * 133.23967 * 359.97438 * 4 3 2 6 6 C 1.34932 * 110.84070 * 180.02562 * 5 4 3 7 7 C 1.46992 * 125.13868 * 179.97438 * 6 5 4 8 8 O 1.21660 * 120.00021 * 180.02562 * 7 6 5 9 9 N 1.34773 * 120.00410 * 0.02562 * 7 6 5 10 10 C 1.47536 * 125.65688 * 359.69146 * 9 7 6 11 11 C 1.55355 * 104.88912 * 156.01691 * 10 9 7 12 12 C 1.53948 * 101.33259 * 36.02677 * 11 10 9 13 13 C 1.52504 * 115.78762 * 94.93684 * 12 11 10 14 14 C 1.54019 * 86.68087 * 93.33929 * 13 12 11 15 15 O 1.42900 * 113.57457 * 269.85879 * 14 13 12 16 16 C 1.52500 * 115.79950 * 196.44973 * 12 11 10 17 17 C 1.47340 * 125.66193 * 180.02562 * 9 7 6 18 18 C 1.35806 * 109.72017 * 359.97438 * 6 5 4 19 19 C 1.40608 * 119.13436 * 179.97438 * 4 3 2 20 20 C 1.39771 * 120.12163 * 359.76021 * 19 4 3 21 21 C 1.50706 * 120.09534 * 180.27332 * 20 19 4 22 22 O 1.42898 * 109.47165 * 285.24256 * 21 20 19 23 23 Si 1.86295 * 109.47281 * 165.24214 * 21 20 19 24 24 C 1.36627 * 119.81596 * 0.51377 * 20 19 4 25 25 C 1.38263 * 120.12245 * 359.97438 * 3 2 1 26 26 H 1.09000 * 109.47258 * 179.97438 * 1 2 3 27 27 H 1.09000 * 109.46979 * 300.00170 * 1 2 3 28 28 H 1.09007 * 109.46631 * 59.99688 * 1 2 3 29 29 H 1.08991 * 110.34094 * 274.98771 * 10 9 7 30 30 H 1.09005 * 110.33517 * 37.23113 * 10 9 7 31 31 H 1.09009 * 111.21886 * 277.95992 * 11 10 9 32 32 H 1.08999 * 110.96733 * 153.99043 * 11 10 9 33 33 H 1.08999 * 113.68288 * 207.78391 * 13 12 11 34 34 H 1.09000 * 113.67841 * 338.89636 * 13 12 11 35 35 H 1.08993 * 113.64571 * 139.09189 * 14 13 12 36 36 H 0.96697 * 113.99998 * 277.75682 * 15 14 13 37 37 H 1.09002 * 113.68219 * 21.12072 * 16 12 11 38 38 H 1.08998 * 113.67677 * 152.13168 * 16 12 11 39 39 H 1.09000 * 109.97666 * 301.28455 * 17 9 7 40 40 H 1.09000 * 109.97544 * 62.53275 * 17 9 7 41 41 H 1.07999 * 126.95793 * 180.02562 * 18 6 5 42 42 H 1.09004 * 109.46911 * 45.23979 * 21 20 19 43 43 H 0.96701 * 113.99790 * 300.00186 * 22 21 20 44 44 H 1.48500 * 110.00013 * 58.67942 * 23 21 20 45 45 H 1.48503 * 109.99874 * 180.02562 * 23 21 20 46 46 H 1.08002 * 119.75873 * 179.73878 * 24 20 19 47 47 H 1.07994 * 119.66051 * 0.02622 * 25 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4388 1.2873 -0.0005 5 8 4.4141 0.3573 -0.0007 6 6 5.6318 0.9386 -0.0007 7 6 6.9131 0.2183 -0.0003 8 8 7.9597 0.8387 0.0001 9 7 6.9287 -1.1293 -0.0004 10 6 5.7400 -2.0032 0.0056 11 6 6.2278 -3.3449 -0.6071 12 6 7.6602 -3.4290 -0.0495 13 6 7.8268 -4.2388 1.2320 14 6 8.1545 -5.4394 0.3246 15 8 7.0067 -6.2057 -0.0460 16 6 8.5865 -4.4201 -0.7462 17 6 8.1356 -1.9744 0.0005 18 6 5.4945 2.2897 -0.0012 19 6 4.0555 2.5510 -0.0011 20 6 3.2766 3.7115 -0.0061 21 6 3.9382 5.0656 -0.0129 22 8 4.4663 5.3442 1.2853 23 14 2.6846 6.3671 -0.4658 24 6 1.9138 3.6151 0.0001 25 6 1.2958 2.3726 -0.0005 26 1 -0.3634 -1.0277 -0.0005 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 5.3872 -2.1560 1.0255 30 1 4.9497 -1.5718 -0.6089 31 1 6.2338 -3.3021 -1.6964 32 1 5.6207 -4.1784 -0.2540 33 1 8.6650 -3.9148 1.8488 34 1 6.9029 -4.3573 1.7981 35 1 8.9732 -6.0564 0.6946 36 1 6.7299 -6.8478 0.6220 37 1 8.2675 -4.6829 -1.7549 38 1 9.6402 -4.1466 -0.6925 39 1 8.7465 -1.7522 -0.8745 40 1 8.7110 -1.8010 0.9099 41 1 6.2875 3.0229 -0.0017 42 1 4.7475 5.0709 -0.7432 43 1 3.8006 5.3554 1.9866 44 1 1.5602 6.3486 0.5041 45 1 3.3248 7.7070 -0.4766 46 1 1.3129 4.5125 0.0004 47 1 0.2175 2.3120 -0.0005 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17058092_6672420.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:07:44 Heat of formation + Delta-G solvation = -68.649065 kcal Electronic energy + Delta-G solvation = -32865.450199 eV Core-core repulsion = 28369.555924 eV Total energy + Delta-G solvation = -4495.894275 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.150 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -43.63963 -41.82600 -40.73530 -39.93495 -39.10253 -37.62993 -37.06618 -35.36445 -33.52344 -31.98805 -31.40318 -30.90446 -29.42133 -28.46955 -27.01740 -26.33285 -25.33566 -24.00174 -23.65918 -22.83059 -21.77880 -20.99641 -19.97819 -19.19632 -18.99188 -18.47562 -18.13750 -17.77697 -17.62964 -17.15256 -16.98207 -16.69458 -16.34181 -16.26055 -16.16777 -15.84777 -15.77301 -15.22336 -14.89441 -14.62851 -14.48542 -14.25414 -14.18388 -14.03408 -13.82938 -13.62444 -13.45021 -13.40151 -13.33968 -13.23818 -12.80948 -12.61081 -12.46014 -12.33538 -12.11466 -11.86844 -11.66298 -11.63910 -11.31796 -11.24649 -10.90659 -10.72706 -10.59020 -9.85562 -9.64718 -8.95715 -4.98792 -0.54279 0.14947 0.76116 1.22863 1.31530 1.53365 1.87483 1.92974 2.06118 2.12286 2.43282 2.96792 3.10066 3.30523 3.34650 3.41367 3.52034 3.53444 3.63028 3.65084 3.80508 3.86459 3.90314 3.99852 4.09155 4.09861 4.20009 4.23015 4.26002 4.34545 4.45903 4.49197 4.50457 4.58858 4.63961 4.70213 4.71441 4.75770 4.84121 4.91263 4.94145 4.97748 5.02409 5.09599 5.13066 5.16841 5.25368 5.28115 5.37910 5.69900 6.20091 6.32881 6.40871 6.60279 6.95021 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.311 6.311 3 C 0.151 3.849 4 C 0.042 3.958 5 O -0.169 6.169 6 C -0.017 4.017 7 C 0.612 3.388 8 O -0.512 6.512 9 N -0.607 5.607 10 C 0.097 3.903 11 C -0.103 4.103 12 C -0.090 4.090 13 C -0.158 4.158 14 C 0.081 3.919 15 O -0.549 6.549 16 C -0.118 4.118 17 C 0.122 3.878 18 C -0.106 4.106 19 C -0.080 4.080 20 C -0.095 4.095 21 C -0.074 4.074 22 O -0.525 6.525 23 Si 0.692 3.308 24 C -0.096 4.096 25 C -0.179 4.179 26 H 0.105 0.895 27 H 0.059 0.941 28 H 0.061 0.939 29 H 0.073 0.927 30 H 0.089 0.911 31 H 0.081 0.919 32 H 0.097 0.903 33 H 0.093 0.907 34 H 0.078 0.922 35 H 0.071 0.929 36 H 0.382 0.618 37 H 0.083 0.917 38 H 0.100 0.900 39 H 0.078 0.922 40 H 0.075 0.925 41 H 0.174 0.826 42 H 0.119 0.881 43 H 0.375 0.625 44 H -0.258 1.258 45 H -0.255 1.255 46 H 0.140 0.860 47 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.394 -3.636 -0.441 6.520 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.224 6.224 3 C 0.105 3.895 4 C -0.006 4.006 5 O -0.071 6.071 6 C -0.067 4.067 7 C 0.400 3.600 8 O -0.389 6.389 9 N -0.340 5.340 10 C -0.025 4.025 11 C -0.141 4.141 12 C -0.090 4.090 13 C -0.195 4.195 14 C 0.022 3.978 15 O -0.355 6.355 16 C -0.155 4.155 17 C 0.000 4.000 18 C -0.126 4.126 19 C -0.081 4.081 20 C -0.096 4.096 21 C -0.183 4.183 22 O -0.331 6.331 23 Si 0.593 3.407 24 C -0.114 4.114 25 C -0.198 4.198 26 H 0.124 0.876 27 H 0.078 0.922 28 H 0.080 0.920 29 H 0.092 0.908 30 H 0.107 0.893 31 H 0.099 0.901 32 H 0.115 0.885 33 H 0.111 0.889 34 H 0.096 0.904 35 H 0.089 0.911 36 H 0.230 0.770 37 H 0.102 0.898 38 H 0.118 0.882 39 H 0.096 0.904 40 H 0.093 0.907 41 H 0.192 0.808 42 H 0.136 0.864 43 H 0.223 0.777 44 H -0.183 1.183 45 H -0.180 1.180 46 H 0.157 0.843 47 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -4.601 -2.605 -1.066 5.394 hybrid contribution -0.252 -0.383 1.788 1.846 sum -4.854 -2.988 0.722 5.745 Atomic orbital electron populations 1.23188 0.77343 1.04735 1.01773 1.86170 1.22130 1.25709 1.88376 1.17737 0.86507 0.85851 0.99387 1.18847 0.87584 0.87197 1.07019 1.84200 1.12658 1.34251 1.75999 1.21884 0.83800 0.92414 1.08606 1.16265 0.85629 0.80502 0.77598 1.90924 1.30496 1.66662 1.50813 1.48414 1.09393 1.04335 1.71872 1.22663 0.87834 0.90105 1.01901 1.22522 0.94200 0.96475 1.00919 1.21950 0.96692 0.92516 0.97854 1.23577 1.03043 0.96897 0.96027 1.22725 0.88210 0.91032 0.95831 1.86465 1.47070 1.54791 1.47149 1.22907 0.99572 0.93688 0.99359 1.21880 0.86980 0.88247 1.02849 1.22722 0.94776 0.94205 1.00935 1.19399 0.92580 0.92054 1.04110 1.19397 0.92812 0.94318 1.03063 1.25038 1.06798 0.97939 0.88554 1.86641 1.37588 1.92577 1.16323 0.94887 0.77560 0.77874 0.90371 1.20578 0.93473 0.97787 0.99574 1.20958 1.00325 0.90555 1.07934 0.87644 0.92192 0.92036 0.90843 0.89262 0.90085 0.88498 0.88870 0.90354 0.91131 0.77007 0.89804 0.88213 0.90414 0.90657 0.80850 0.86360 0.77738 1.18324 1.17994 0.84283 0.83546 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.07 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.44 10.50 -19.61 -0.21 -0.65 16 3 C 0.15 0.28 6.70 -39.12 -0.26 0.01 16 4 C 0.04 0.15 7.35 -38.24 -0.28 -0.14 16 5 O -0.17 -0.67 7.69 2.67 0.02 -0.65 16 6 C -0.02 -0.07 6.89 -36.91 -0.25 -0.33 16 7 C 0.61 3.05 7.83 -12.72 -0.10 2.95 16 8 O -0.51 -3.91 17.16 5.22 0.09 -3.82 16 9 N -0.61 -1.66 3.34 -172.06 -0.57 -2.23 16 10 C 0.10 0.09 6.17 -2.23 -0.01 0.08 16 11 C -0.10 0.03 6.01 -24.99 -0.15 -0.12 16 12 C -0.09 0.06 0.93 -154.49 -0.14 -0.09 16 13 C -0.16 0.26 7.14 -26.45 -0.19 0.07 16 14 C 0.08 -0.14 5.27 -25.69 -0.14 -0.27 16 15 O -0.55 0.53 12.40 -35.23 -0.44 0.10 16 16 C -0.12 0.14 7.23 -26.45 -0.19 -0.05 16 17 C 0.12 0.14 6.37 -3.52 -0.02 0.11 16 18 C -0.11 -0.40 10.68 -37.23 -0.40 -0.79 16 19 C -0.08 -0.24 6.16 -105.21 -0.65 -0.89 16 20 C -0.10 -0.10 5.26 -104.63 -0.55 -0.65 16 21 C -0.07 -0.02 2.70 36.01 0.10 0.07 16 22 O -0.53 -0.95 12.88 -35.23 -0.45 -1.41 16 23 Si 0.69 -0.83 30.25 -169.99 -5.14 -5.97 16 24 C -0.10 0.05 8.62 -39.97 -0.34 -0.30 16 25 C -0.18 0.08 9.03 -39.37 -0.36 -0.28 16 26 H 0.11 -0.43 8.14 -51.93 -0.42 -0.85 16 27 H 0.06 -0.22 7.66 -51.93 -0.40 -0.62 16 28 H 0.06 -0.24 7.66 -51.92 -0.40 -0.64 16 29 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 30 H 0.09 0.14 6.18 -51.93 -0.32 -0.18 16 31 H 0.08 0.01 8.14 -51.92 -0.42 -0.41 16 32 H 0.10 -0.04 7.19 -51.93 -0.37 -0.42 16 33 H 0.09 -0.20 8.01 -51.93 -0.42 -0.62 16 34 H 0.08 -0.12 8.12 -51.93 -0.42 -0.54 16 35 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 36 H 0.38 -1.78 9.12 45.56 0.42 -1.37 16 37 H 0.08 -0.03 8.12 -51.93 -0.42 -0.45 16 38 H 0.10 -0.23 8.14 -51.93 -0.42 -0.66 16 39 H 0.08 0.11 8.09 -51.93 -0.42 -0.31 16 40 H 0.08 0.09 7.86 -51.93 -0.41 -0.32 16 41 H 0.17 0.55 8.06 -52.49 -0.42 0.12 16 42 H 0.12 0.00 7.96 -51.93 -0.41 -0.41 16 43 H 0.38 -0.45 8.70 45.56 0.40 -0.05 16 44 H -0.26 0.01 6.69 56.52 0.38 0.39 16 45 H -0.26 -0.56 7.11 56.52 0.40 -0.16 16 46 H 0.14 -0.34 4.81 -52.49 -0.25 -0.59 16 47 H 0.15 -0.47 6.26 -52.49 -0.33 -0.80 16 LS Contribution 382.69 15.07 5.77 5.77 Total: 0.00 -9.00 382.69 -9.40 -18.40 By element: Atomic # 1 Polarization: -4.35 SS G_CDS: -5.52 Total: -9.86 kcal Atomic # 6 Polarization: 3.29 SS G_CDS: -2.95 Total: 0.33 kcal Atomic # 7 Polarization: -1.66 SS G_CDS: -0.57 Total: -2.23 kcal Atomic # 8 Polarization: -5.44 SS G_CDS: -0.99 Total: -6.43 kcal Atomic # 14 Polarization: -0.83 SS G_CDS: -5.14 Total: -5.97 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -9.00 -9.40 -18.40 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17058092_6672420.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.249 kcal (2) G-P(sol) polarization free energy of solvation -8.996 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.245 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.404 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.400 kcal (6) G-S(sol) free energy of system = (1) + (5) -68.649 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds