Wall clock time and date at job start Tue Mar 9 2021 13:10:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52998 * 112.90508 * 2 1 4 4 O 1.42892 * 109.47344 * 48.74715 * 3 2 1 5 5 C 1.53780 * 113.61561 * 131.24937 * 2 1 3 6 6 C 1.53780 * 87.08155 * 139.98428 * 5 2 1 7 7 H 1.08995 * 113.69543 * 89.13026 * 6 5 2 8 8 N 1.46505 * 113.61219 * 220.01991 * 6 5 2 9 9 C 1.34777 * 120.00115 * 252.49515 * 8 6 5 10 10 O 1.21288 * 119.99593 * 0.02562 * 9 8 6 11 11 C 1.50697 * 120.00369 * 180.02562 * 9 8 6 12 12 C 1.52997 * 109.47466 * 180.02562 * 11 9 8 13 13 O 1.42898 * 109.47319 * 180.02562 * 12 11 9 14 14 C 1.35900 * 117.00172 * 179.97438 * 13 12 11 15 15 C 1.38711 * 120.05562 * 179.97438 * 14 13 12 16 16 C 1.38162 * 119.94377 * 180.02562 * 15 14 13 17 17 C 1.50704 * 119.97406 * 180.02562 * 16 15 14 18 18 O 1.42894 * 109.47123 * 64.99928 * 17 16 15 19 19 Si 1.86301 * 109.46970 * 184.99958 * 17 16 15 20 20 C 1.38250 * 120.05723 * 359.97438 * 16 15 14 21 21 C 1.38288 * 120.10917 * 359.97438 * 20 16 15 22 22 C 1.38129 * 120.05279 * 359.76642 * 21 20 16 23 23 C 1.53782 * 113.61526 * 228.74810 * 2 1 3 24 24 H 1.09007 * 109.47097 * 191.25129 * 1 2 3 25 25 H 1.08997 * 109.47265 * 311.25159 * 1 2 3 26 26 H 1.08998 * 109.46899 * 71.25779 * 1 2 3 27 27 H 1.09005 * 109.46907 * 168.74931 * 3 2 1 28 28 H 1.08996 * 109.47098 * 288.74478 * 3 2 1 29 29 H 0.96699 * 114.00246 * 179.97438 * 4 3 2 30 30 H 1.09005 * 113.61320 * 25.43354 * 5 2 1 31 31 H 1.08997 * 113.61992 * 254.53099 * 5 2 1 32 32 H 0.97003 * 120.00244 * 72.49545 * 8 6 5 33 33 H 1.09002 * 109.47120 * 59.99760 * 11 9 8 34 34 H 1.08998 * 109.46862 * 300.00562 * 11 9 8 35 35 H 1.09002 * 109.47153 * 59.99773 * 12 11 9 36 36 H 1.09001 * 109.46832 * 299.99964 * 12 11 9 37 37 H 1.07999 * 120.02730 * 0.02562 * 15 14 13 38 38 H 1.08996 * 109.46548 * 304.99295 * 17 16 15 39 39 H 0.96698 * 114.00529 * 59.99567 * 18 17 16 40 40 H 1.48499 * 110.00183 * 58.67956 * 19 17 16 41 41 H 1.48503 * 109.99550 * 180.02562 * 19 17 16 42 42 H 1.07997 * 119.94730 * 179.97438 * 20 16 15 43 43 H 1.07992 * 119.97264 * 180.02562 * 21 20 16 44 44 H 1.08010 * 120.02456 * 180.27612 * 22 21 20 45 45 H 1.08994 * 113.61586 * 105.47210 * 23 2 1 46 46 H 1.09002 * 113.61355 * 334.56403 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.1255 1.4093 0.0000 4 8 1.4926 2.1939 1.0128 5 6 2.1460 -0.9290 1.0594 6 6 3.1924 -1.3135 0.0001 7 1 4.0717 -0.6695 -0.0009 8 7 3.5311 -2.7389 0.0001 9 6 4.7263 -3.1475 0.4702 10 8 5.5213 -2.3351 0.8936 11 6 5.0750 -4.6135 0.4697 12 6 6.4772 -4.8045 1.0514 13 8 6.8081 -6.1946 1.0504 14 6 8.0291 -6.5386 1.5380 15 6 8.4154 -7.8705 1.5673 16 6 9.6570 -8.2177 2.0640 17 6 10.0776 -9.6645 2.0957 18 8 10.1906 -10.1570 0.7590 19 14 11.7245 -9.8137 2.9538 20 6 10.5143 -7.2389 2.5311 21 6 10.1320 -5.9102 2.5020 22 6 8.8938 -5.5576 2.0014 23 6 2.1460 -0.9291 -1.0593 24 1 -0.3634 -1.0080 0.2005 25 1 -0.3634 0.6776 0.7726 26 1 -0.3633 0.3302 -0.9732 27 1 3.1953 1.3517 0.2005 28 1 1.9627 1.8725 -0.9731 29 1 1.8217 3.1013 1.0705 30 1 1.4945 -1.7535 1.3490 31 1 2.5650 -0.3989 1.9146 32 1 2.8952 -3.3886 -0.3382 33 1 5.0503 -4.9926 -0.5520 34 1 4.3527 -5.1589 1.0770 35 1 6.5015 -4.4256 2.0731 36 1 7.1997 -4.2590 0.4443 37 1 7.7461 -8.6355 1.2022 38 1 9.3322 -10.2478 2.6361 39 1 10.8378 -9.6835 0.2187 40 1 11.6285 -9.2755 4.3344 41 1 12.1507 -11.2358 2.9910 42 1 11.4843 -7.5123 2.9194 43 1 10.8036 -5.1474 2.8670 44 1 8.5974 -4.5193 1.9747 45 1 2.5650 -0.3989 -1.9145 46 1 1.4945 -1.7536 -1.3489 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17058578_4549614.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:26 Heat of formation + Delta-G solvation = -108.020114 kcal Electronic energy + Delta-G solvation = -26190.570773 eV Core-core repulsion = 22240.792236 eV Total energy + Delta-G solvation = -3949.778537 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.166 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -41.63572 -41.21030 -40.08421 -39.03821 -37.28552 -37.19397 -34.84725 -33.31058 -32.42480 -30.95360 -30.18642 -27.49214 -27.00733 -26.88357 -25.58137 -23.64257 -22.99969 -21.96436 -21.47527 -19.59259 -19.23917 -18.42522 -18.10913 -17.73347 -17.48439 -17.32424 -17.08129 -16.81072 -16.26427 -16.16186 -16.00311 -15.71100 -15.34072 -14.94426 -14.73858 -14.55480 -14.35957 -14.23684 -14.11437 -13.94624 -13.69725 -13.35944 -13.25870 -13.06490 -12.97295 -12.81566 -12.64871 -12.35116 -11.94890 -11.88778 -11.79975 -11.59434 -11.56328 -11.37047 -10.99014 -10.86554 -10.45635 -10.11942 -9.88863 -9.20634 -5.00809 0.25469 0.44673 1.29497 1.48908 1.66297 1.70119 1.99439 2.47199 2.71742 2.97012 3.29677 3.47729 3.50118 3.51841 3.65606 3.67602 3.81784 3.83707 3.89817 3.93483 4.08003 4.11020 4.23378 4.28367 4.33325 4.35970 4.41557 4.49134 4.52664 4.57834 4.59505 4.61230 4.65907 4.72542 4.74787 4.85980 4.96916 5.01031 5.08308 5.18161 5.30414 5.36170 5.41621 5.44254 5.47951 5.72212 6.32913 6.40958 6.58555 6.62452 7.07405 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.130 4.130 2 C -0.082 4.082 3 C 0.097 3.903 4 O -0.569 6.569 5 C -0.139 4.139 6 C 0.119 3.881 7 H 0.116 0.884 8 N -0.718 5.718 9 C 0.521 3.479 10 O -0.539 6.539 11 C -0.142 4.142 12 C 0.075 3.925 13 O -0.316 6.316 14 C 0.132 3.868 15 C -0.126 4.126 16 C -0.083 4.083 17 C -0.069 4.069 18 O -0.539 6.539 19 Si 0.691 3.309 20 C -0.154 4.154 21 C -0.073 4.073 22 C -0.202 4.202 23 C -0.135 4.135 24 H 0.055 0.945 25 H 0.068 0.932 26 H 0.055 0.945 27 H 0.049 0.951 28 H 0.050 0.950 29 H 0.382 0.618 30 H 0.087 0.913 31 H 0.075 0.925 32 H 0.404 0.596 33 H 0.108 0.892 34 H 0.107 0.893 35 H 0.072 0.928 36 H 0.073 0.927 37 H 0.133 0.867 38 H 0.115 0.885 39 H 0.379 0.621 40 H -0.258 1.258 41 H -0.255 1.255 42 H 0.129 0.871 43 H 0.131 0.869 44 H 0.132 0.868 45 H 0.078 0.922 46 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.501 2.320 -3.099 3.903 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 C -0.083 4.083 3 C 0.019 3.981 4 O -0.374 6.374 5 C -0.178 4.178 6 C 0.015 3.985 7 H 0.134 0.866 8 N -0.369 5.369 9 C 0.308 3.692 10 O -0.416 6.416 11 C -0.182 4.182 12 C -0.001 4.001 13 O -0.230 6.230 14 C 0.087 3.913 15 C -0.144 4.144 16 C -0.083 4.083 17 C -0.180 4.180 18 O -0.344 6.344 19 Si 0.592 3.408 20 C -0.172 4.172 21 C -0.091 4.091 22 C -0.221 4.221 23 C -0.173 4.173 24 H 0.074 0.926 25 H 0.087 0.913 26 H 0.074 0.926 27 H 0.067 0.933 28 H 0.068 0.932 29 H 0.229 0.771 30 H 0.106 0.894 31 H 0.094 0.906 32 H 0.239 0.761 33 H 0.126 0.874 34 H 0.125 0.875 35 H 0.091 0.909 36 H 0.091 0.909 37 H 0.151 0.849 38 H 0.132 0.868 39 H 0.227 0.773 40 H -0.182 1.182 41 H -0.180 1.180 42 H 0.146 0.854 43 H 0.149 0.851 44 H 0.150 0.850 45 H 0.096 0.904 46 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -0.414 1.465 -1.889 2.426 hybrid contribution -0.670 0.512 -0.203 0.868 sum -1.084 1.977 -2.092 3.076 Atomic orbital electron populations 1.21591 0.92788 1.01986 1.02392 1.21579 0.96751 0.92882 0.97063 1.21909 0.95231 0.90174 0.90778 1.86455 1.65890 1.27617 1.57476 1.23557 0.97554 0.99070 0.97591 1.22631 0.97253 0.81816 0.96833 0.86626 1.45952 1.17702 1.08763 1.64488 1.20334 0.81581 0.90381 0.76921 1.90747 1.49074 1.55635 1.46117 1.21480 0.97813 0.93876 1.05057 1.22414 0.95670 0.79880 1.02126 1.85976 1.31538 1.26830 1.78686 1.18961 0.84436 0.93643 0.94238 1.20244 0.96974 0.93509 1.03696 1.20128 0.93968 0.95841 0.98366 1.25105 1.10911 0.91867 0.90108 1.86510 1.65357 1.60132 1.22403 0.94648 0.81583 0.82657 0.81867 1.20908 0.99513 0.93070 1.03675 1.20933 0.95439 0.96054 0.96691 1.21397 0.95951 0.99446 1.05303 1.23460 0.97384 0.99428 0.97019 0.92615 0.91257 0.92565 0.93274 0.93164 0.77097 0.89413 0.90575 0.76138 0.87403 0.87459 0.90940 0.90891 0.84880 0.86807 0.77320 1.18236 1.17968 0.85416 0.85128 0.84970 0.90361 0.88766 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 0.07 9.08 37.16 0.34 0.41 16 2 C -0.08 0.08 1.19 -153.70 -0.18 -0.11 16 3 C 0.10 -0.09 6.39 37.16 0.24 0.15 16 4 O -0.57 -0.13 12.64 -35.23 -0.45 -0.58 16 5 C -0.14 0.06 6.99 -25.92 -0.18 -0.12 16 6 C 0.12 -0.11 3.89 -67.11 -0.26 -0.37 16 7 H 0.12 0.08 6.98 -51.93 -0.36 -0.28 16 8 N -0.72 1.23 5.35 -53.01 -0.28 0.95 16 9 C 0.52 0.23 7.83 -10.99 -0.09 0.14 16 10 O -0.54 -2.38 15.58 5.55 0.09 -2.29 16 11 C -0.14 0.23 6.07 -27.89 -0.17 0.06 16 12 C 0.07 0.04 4.03 37.16 0.15 0.19 16 13 O -0.32 -0.67 10.14 -19.43 -0.20 -0.87 16 14 C 0.13 0.32 6.69 -39.22 -0.26 0.06 16 15 C -0.13 -0.29 9.62 -39.43 -0.38 -0.66 16 16 C -0.08 -0.09 5.35 -104.64 -0.56 -0.65 16 17 C -0.07 -0.03 2.80 36.01 0.10 0.07 16 18 O -0.54 -0.43 12.83 -35.23 -0.45 -0.88 16 19 Si 0.69 -0.45 29.80 -169.99 -5.07 -5.52 16 20 C -0.15 -0.04 8.67 -39.56 -0.34 -0.38 16 21 C -0.07 -0.03 10.04 -39.60 -0.40 -0.43 16 22 C -0.20 -0.29 9.04 -39.43 -0.36 -0.65 16 23 C -0.13 0.32 6.98 -25.92 -0.18 0.14 16 24 H 0.05 -0.07 7.94 -51.92 -0.41 -0.48 16 25 H 0.07 0.08 7.33 -51.93 -0.38 -0.30 16 26 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 27 H 0.05 -0.06 7.34 -51.93 -0.38 -0.44 16 28 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 29 H 0.38 -1.42 9.12 45.56 0.42 -1.01 16 30 H 0.09 -0.08 7.96 -51.93 -0.41 -0.49 16 31 H 0.08 0.10 8.10 -51.93 -0.42 -0.33 16 32 H 0.40 -1.78 8.73 -40.82 -0.36 -2.13 16 33 H 0.11 -0.33 8.14 -51.93 -0.42 -0.75 16 34 H 0.11 -0.31 8.14 -51.93 -0.42 -0.73 16 35 H 0.07 0.07 7.64 -51.93 -0.40 -0.33 16 36 H 0.07 0.05 7.60 -51.93 -0.39 -0.34 16 37 H 0.13 0.29 8.06 -52.49 -0.42 -0.13 16 38 H 0.11 0.09 7.96 -51.93 -0.41 -0.32 16 39 H 0.38 -1.17 8.70 45.56 0.40 -0.78 16 40 H -0.26 -0.45 7.11 56.52 0.40 -0.05 16 41 H -0.25 -0.64 7.11 56.52 0.40 -0.23 16 42 H 0.13 -0.24 4.90 -52.49 -0.26 -0.49 16 43 H 0.13 -0.22 8.06 -52.49 -0.42 -0.64 16 44 H 0.13 0.07 6.30 -52.48 -0.33 -0.26 16 45 H 0.08 -0.21 8.10 -51.93 -0.42 -0.63 16 46 H 0.09 -0.32 8.08 -51.93 -0.42 -0.74 16 LS Contribution 376.69 15.07 5.68 5.68 Total: 0.00 -9.06 376.69 -9.50 -18.55 By element: Atomic # 1 Polarization: -6.60 SS G_CDS: -6.28 Total: -12.88 kcal Atomic # 6 Polarization: 0.38 SS G_CDS: -2.53 Total: -2.16 kcal Atomic # 7 Polarization: 1.23 SS G_CDS: -0.28 Total: 0.95 kcal Atomic # 8 Polarization: -3.61 SS G_CDS: -1.01 Total: -4.62 kcal Atomic # 14 Polarization: -0.45 SS G_CDS: -5.07 Total: -5.52 kcal Total LS contribution 5.68 Total: 5.68 kcal Total: -9.06 -9.50 -18.55 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17058578_4549614.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.465 kcal (2) G-P(sol) polarization free energy of solvation -9.058 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -98.523 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.497 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.555 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.020 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds