Wall clock time and date at job start Tue Mar 9 2021 13:10:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35995 * 116.99898 * 2 1 4 4 C 1.39156 * 120.07126 * 180.02562 * 3 2 1 5 5 O 1.35999 * 120.07260 * 359.94473 * 4 3 2 6 6 C 1.42901 * 116.99826 * 180.02562 * 5 4 3 7 7 C 1.50696 * 109.46697 * 180.02562 * 6 5 4 8 8 O 1.21281 * 120.00493 * 0.02562 * 7 6 5 9 9 N 1.34781 * 119.99693 * 180.02562 * 7 6 5 10 10 C 1.46501 * 120.00028 * 180.02562 * 9 7 6 11 11 H 1.08998 * 112.84769 * 327.68595 * 10 9 7 12 12 C 1.53787 * 113.61211 * 98.99105 * 10 9 7 13 13 C 1.53781 * 87.08022 * 89.11972 * 12 10 9 14 14 C 1.53006 * 113.61217 * 270.88216 * 13 12 10 15 15 C 1.52993 * 113.69187 * 139.99588 * 13 12 10 16 16 O 1.42893 * 109.47869 * 82.46002 * 15 13 12 17 17 C 1.53780 * 113.61339 * 196.48856 * 10 9 7 18 18 C 1.38563 * 119.85189 * 180.23277 * 4 3 2 19 19 C 1.38238 * 120.00098 * 359.48576 * 18 4 3 20 20 N 1.48010 * 119.92779 * 180.25589 * 19 18 4 21 21 O 1.21797 * 119.99812 * 0.25228 * 20 19 18 22 22 O 1.21803 * 119.99842 * 180.25502 * 20 19 18 23 23 C 1.38253 * 120.14769 * 0.50959 * 19 18 4 24 24 C 1.50699 * 119.92956 * 179.76520 * 23 19 18 25 25 O 1.42902 * 109.46659 * 74.98075 * 24 23 19 26 26 Si 1.86297 * 109.47241 * 194.98072 * 24 23 19 27 27 C 1.38248 * 120.14288 * 359.74965 * 23 19 18 28 28 H 1.08997 * 109.47154 * 180.02562 * 1 2 3 29 29 H 1.09002 * 109.47175 * 300.00352 * 1 2 3 30 30 H 1.09001 * 109.47303 * 60.00002 * 1 2 3 31 31 H 1.09006 * 109.46789 * 60.01060 * 6 5 4 32 32 H 1.08998 * 109.47293 * 300.00561 * 6 5 4 33 33 H 0.96999 * 120.00195 * 0.02562 * 9 7 6 34 34 H 1.09002 * 113.61233 * 203.66359 * 12 10 9 35 35 H 1.08996 * 113.61372 * 334.56898 * 12 10 9 36 36 H 1.09004 * 109.47151 * 150.03385 * 14 13 12 37 37 H 1.08995 * 109.47194 * 270.03382 * 14 13 12 38 38 H 1.09001 * 109.46702 * 30.03487 * 14 13 12 39 39 H 1.09002 * 109.47036 * 202.46558 * 15 13 12 40 40 H 1.09001 * 109.47263 * 322.45527 * 15 13 12 41 41 H 0.96692 * 114.00714 * 179.97438 * 16 15 13 42 42 H 1.08997 * 113.61856 * 25.43285 * 17 10 9 43 43 H 1.09005 * 113.61230 * 156.34008 * 17 10 9 44 44 H 1.08006 * 119.99595 * 179.71822 * 18 4 3 45 45 H 1.08998 * 109.47143 * 314.97933 * 24 23 19 46 46 H 0.96704 * 113.99656 * 179.97438 * 25 24 23 47 47 H 1.48494 * 110.00280 * 178.68175 * 26 24 23 48 48 H 1.48501 * 109.99914 * 300.00185 * 26 24 23 49 49 H 1.08001 * 119.99872 * 179.97438 * 27 23 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2863 -0.0005 5 8 4.1796 0.1476 0.0001 6 6 5.6004 0.3006 0.0000 7 6 6.2518 -1.0582 0.0001 8 8 5.5669 -2.0592 -0.0003 9 7 7.5957 -1.1613 0.0006 10 6 8.2291 -2.4823 0.0001 11 1 7.6464 -3.2312 0.5364 12 6 8.6946 -2.9417 -1.3917 13 6 10.0304 -2.2425 -1.0892 14 6 10.0602 -0.7708 -1.5067 15 6 11.2553 -3.0218 -1.5720 16 8 11.4681 -2.7624 -2.9609 17 6 9.7135 -2.4538 0.4007 18 6 4.0603 2.5233 0.0043 19 6 3.3030 3.6798 -0.0010 20 7 3.9716 5.0003 -0.0015 21 8 5.1877 5.0671 -0.0018 22 8 3.3056 6.0201 -0.0015 23 6 1.9224 3.6058 -0.0006 24 6 1.1017 4.8696 -0.0011 25 8 1.1348 5.4585 -1.3027 26 14 -0.6594 4.4667 0.4536 27 6 1.2932 2.3748 -0.0001 28 1 -0.3633 -1.0276 0.0005 29 1 -0.3633 0.5139 0.8900 30 1 -0.3634 0.5138 -0.8900 31 1 5.9065 0.8507 0.8899 32 1 5.9066 0.8500 -0.8902 33 1 8.1435 -0.3608 0.0013 34 1 8.7803 -4.0241 -1.4882 35 1 8.1385 -2.4854 -2.2107 36 1 10.7282 -0.2190 -0.8454 37 1 10.4180 -0.6915 -2.5332 38 1 9.0555 -0.3536 -1.4389 39 1 12.1320 -2.7082 -1.0052 40 1 11.0891 -4.0887 -1.4229 41 1 12.2305 -3.2246 -3.3352 42 1 9.9802 -1.6037 1.0286 43 1 10.0779 -3.4028 0.7942 44 1 5.1386 2.5839 0.0085 45 1 1.5132 5.5704 0.7253 46 1 0.6260 6.2775 -1.3769 47 1 -1.4722 5.7089 0.4877 48 1 -1.2320 3.5119 -0.5292 49 1 0.2146 2.3196 0.0007 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17058578_4549636.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:44 Heat of formation + Delta-G solvation = -108.853552 kcal Electronic energy + Delta-G solvation = -36197.579012 eV Core-core repulsion = 31098.065706 eV Total energy + Delta-G solvation = -5099.513306 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.160 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -43.20980 -42.11634 -41.72937 -40.38501 -39.38157 -39.02767 -37.61066 -37.31609 -37.12494 -34.58800 -32.76327 -32.54330 -30.93473 -29.62970 -28.92198 -27.84680 -27.59885 -26.91776 -25.76375 -24.08601 -23.18875 -22.84556 -21.71314 -20.65548 -19.82099 -19.57786 -19.46285 -18.82306 -18.63333 -18.35772 -18.21115 -18.00572 -17.79875 -17.70211 -17.05478 -16.91749 -16.52311 -16.17786 -16.10210 -15.87563 -15.62833 -15.46987 -15.11820 -14.79005 -14.56523 -14.41918 -14.23354 -14.06979 -13.91121 -13.68445 -13.52809 -13.39436 -13.12153 -13.03918 -12.67074 -12.55238 -12.45487 -12.43313 -12.31042 -12.21357 -11.95024 -11.93774 -11.87481 -11.53478 -11.37004 -10.98784 -10.87463 -10.48735 -10.42511 -10.13673 -9.47714 -5.18348 -1.17401 -0.44376 0.35936 0.46352 1.02445 1.16369 1.37401 1.40228 1.73120 1.76941 1.91359 2.25634 2.86031 3.01967 3.11147 3.26679 3.31334 3.40118 3.45877 3.46655 3.54922 3.65339 3.67957 3.77481 3.86908 3.89257 3.93141 3.98940 3.99217 4.07784 4.18962 4.29683 4.37338 4.40979 4.41946 4.44425 4.59238 4.62153 4.67204 4.73023 4.75457 4.82190 4.90256 5.02769 5.07584 5.25100 5.45658 5.49570 5.53108 5.97256 6.25813 6.35267 6.62675 6.80885 7.02095 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 O -0.284 6.284 3 C 0.171 3.829 4 C 0.110 3.890 5 O -0.264 6.264 6 C 0.031 3.969 7 C 0.519 3.481 8 O -0.506 6.506 9 N -0.710 5.710 10 C 0.124 3.876 11 H 0.104 0.896 12 C -0.137 4.137 13 C -0.085 4.085 14 C -0.134 4.134 15 C 0.090 3.910 16 O -0.570 6.570 17 C -0.134 4.134 18 C -0.118 4.118 19 C -0.025 4.025 20 N 0.037 4.963 21 O -0.173 6.173 22 O -0.139 6.139 23 C 0.009 3.991 24 C -0.085 4.085 25 O -0.523 6.523 26 Si 0.679 3.321 27 C -0.180 4.180 28 H 0.114 0.886 29 H 0.067 0.933 30 H 0.062 0.938 31 H 0.101 0.899 32 H 0.100 0.900 33 H 0.404 0.596 34 H 0.092 0.908 35 H 0.074 0.926 36 H 0.059 0.941 37 H 0.074 0.926 38 H 0.057 0.943 39 H 0.047 0.953 40 H 0.048 0.952 41 H 0.380 0.620 42 H 0.080 0.920 43 H 0.100 0.900 44 H 0.167 0.833 45 H 0.104 0.896 46 H 0.388 0.612 47 H -0.249 1.249 48 H -0.252 1.252 49 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.703 -1.926 3.561 4.109 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.195 6.195 3 C 0.122 3.878 4 C 0.062 3.938 5 O -0.176 6.176 6 C -0.048 4.048 7 C 0.304 3.696 8 O -0.379 6.379 9 N -0.366 5.366 10 C 0.019 3.981 11 H 0.122 0.878 12 C -0.176 4.176 13 C -0.085 4.085 14 C -0.192 4.192 15 C 0.013 3.987 16 O -0.376 6.376 17 C -0.172 4.172 18 C -0.138 4.138 19 C -0.109 4.109 20 N 0.555 4.445 21 O -0.384 6.384 22 O -0.358 6.358 23 C 0.007 3.993 24 C -0.194 4.194 25 O -0.331 6.331 26 Si 0.579 3.421 27 C -0.199 4.199 28 H 0.132 0.868 29 H 0.085 0.915 30 H 0.081 0.919 31 H 0.119 0.881 32 H 0.118 0.882 33 H 0.242 0.758 34 H 0.111 0.889 35 H 0.093 0.907 36 H 0.078 0.922 37 H 0.093 0.907 38 H 0.076 0.924 39 H 0.065 0.935 40 H 0.066 0.934 41 H 0.227 0.773 42 H 0.098 0.902 43 H 0.119 0.881 44 H 0.184 0.816 45 H 0.121 0.879 46 H 0.237 0.763 47 H -0.174 1.174 48 H -0.177 1.177 49 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -1.092 -3.843 3.287 5.173 hybrid contribution 1.153 1.611 -0.916 2.183 sum 0.061 -2.232 2.372 3.257 Atomic orbital electron populations 1.23397 0.76903 1.05650 1.02098 1.86337 1.22384 1.24229 1.86547 1.18409 0.89005 0.85837 0.94515 1.17834 0.88370 0.85319 1.02254 1.86336 1.16767 1.26024 1.88458 1.22658 0.80308 0.97160 1.04641 1.19854 0.82555 0.90187 0.77049 1.90806 1.62581 1.37795 1.46677 1.45758 1.05659 1.09292 1.75866 1.21813 0.93442 0.84852 0.98016 0.87787 1.23508 0.95600 1.01084 0.97402 1.21940 0.94468 0.96736 0.95389 1.21691 1.01498 0.92863 1.03100 1.22102 0.96648 0.97761 0.82228 1.86470 1.53417 1.73624 1.24066 1.23417 0.94366 1.03765 0.95657 1.20768 1.02148 0.88907 1.01975 1.20371 0.91906 0.83067 1.15593 1.43299 1.00930 1.02545 0.97691 1.94542 0.95763 1.93738 1.54360 1.94495 1.64685 1.24337 1.52312 1.18854 0.90506 0.95013 0.94957 1.24995 1.09720 0.94366 0.90326 1.86531 1.74819 1.43845 1.27906 0.95405 0.74328 0.83426 0.88922 1.21038 1.01283 0.89592 1.07983 0.86767 0.91467 0.91925 0.88134 0.88250 0.75815 0.88925 0.90682 0.92185 0.90673 0.92446 0.93510 0.93372 0.77292 0.90166 0.88126 0.81590 0.87867 0.76323 1.17353 1.17670 0.81981 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.04 9.81 101.05 0.99 0.95 16 2 O -0.28 -0.39 10.28 -34.23 -0.35 -0.74 16 3 C 0.17 0.19 6.70 -39.12 -0.26 -0.07 16 4 C 0.11 0.15 6.70 -39.12 -0.26 -0.11 16 5 O -0.26 -0.62 9.45 -47.36 -0.45 -1.07 16 6 C 0.03 -0.03 5.22 36.00 0.19 0.15 16 7 C 0.52 0.64 7.91 -10.99 -0.09 0.56 16 8 O -0.51 -3.08 16.22 -14.35 -0.23 -3.32 16 9 N -0.71 1.02 4.47 -53.01 -0.24 0.78 16 10 C 0.12 -0.10 4.20 -67.12 -0.28 -0.39 16 11 H 0.10 0.06 7.68 -51.93 -0.40 -0.34 16 12 C -0.14 0.04 6.98 -25.92 -0.18 -0.14 16 13 C -0.09 0.13 1.19 -153.70 -0.18 -0.06 16 14 C -0.13 0.20 8.63 37.16 0.32 0.52 16 15 C 0.09 -0.14 6.52 37.15 0.24 0.11 16 16 O -0.57 0.05 12.54 -35.23 -0.44 -0.39 16 17 C -0.13 0.37 6.97 -25.92 -0.18 0.19 16 18 C -0.12 -0.08 8.54 -39.46 -0.34 -0.41 16 19 C -0.03 -0.06 6.85 -79.95 -0.55 -0.61 16 20 N 0.04 0.16 4.45 33.96 0.15 0.31 16 21 O -0.17 -0.85 18.44 -29.46 -0.54 -1.39 16 22 O -0.14 -0.66 14.62 -35.96 -0.53 -1.19 16 23 C 0.01 0.01 5.29 -104.61 -0.55 -0.54 16 24 C -0.08 -0.01 1.73 36.01 0.06 0.05 16 25 O -0.52 -0.75 11.77 -55.47 -0.65 -1.41 16 26 Si 0.68 -1.37 30.19 -169.99 -5.13 -6.51 16 27 C -0.18 0.03 7.65 -39.46 -0.30 -0.27 16 28 H 0.11 -0.45 8.14 -51.93 -0.42 -0.87 16 29 H 0.07 -0.31 7.66 -51.93 -0.40 -0.71 16 30 H 0.06 -0.20 7.66 -51.93 -0.40 -0.60 16 31 H 0.10 -0.40 7.65 -51.93 -0.40 -0.80 16 32 H 0.10 -0.34 7.67 -51.93 -0.40 -0.74 16 33 H 0.40 -1.62 6.52 -40.82 -0.27 -1.88 16 34 H 0.09 -0.05 7.97 -51.93 -0.41 -0.47 16 35 H 0.07 0.10 8.10 -51.93 -0.42 -0.32 16 36 H 0.06 -0.14 8.14 -51.93 -0.42 -0.56 16 37 H 0.07 0.03 7.14 -51.93 -0.37 -0.34 16 38 H 0.06 -0.14 5.30 -51.93 -0.28 -0.41 16 39 H 0.05 -0.11 8.14 -51.93 -0.42 -0.53 16 40 H 0.05 -0.11 7.95 -51.93 -0.41 -0.52 16 41 H 0.38 -1.50 9.12 45.56 0.42 -1.08 16 42 H 0.08 -0.28 8.10 -51.93 -0.42 -0.70 16 43 H 0.10 -0.36 8.10 -51.93 -0.42 -0.78 16 44 H 0.17 -0.26 5.85 -52.48 -0.31 -0.57 16 45 H 0.10 -0.02 6.07 -51.93 -0.32 -0.34 16 46 H 0.39 -0.94 8.74 45.56 0.40 -0.54 16 47 H -0.25 -0.01 7.11 56.52 0.40 0.39 16 48 H -0.25 0.07 6.74 56.52 0.38 0.45 16 49 H 0.16 -0.36 3.13 -52.49 -0.16 -0.53 16 LS Contribution 402.03 15.07 6.06 6.06 Total: 0.00 -12.52 402.03 -9.18 -21.70 By element: Atomic # 1 Polarization: -7.33 SS G_CDS: -5.45 Total: -12.78 kcal Atomic # 6 Polarization: 1.30 SS G_CDS: -1.37 Total: -0.07 kcal Atomic # 7 Polarization: 1.18 SS G_CDS: -0.09 Total: 1.09 kcal Atomic # 8 Polarization: -6.30 SS G_CDS: -3.20 Total: -9.50 kcal Atomic # 14 Polarization: -1.37 SS G_CDS: -5.13 Total: -6.51 kcal Total LS contribution 6.06 Total: 6.06 kcal Total: -12.52 -9.18 -21.70 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17058578_4549636.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.153 kcal (2) G-P(sol) polarization free energy of solvation -12.523 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.676 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.178 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.700 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.854 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds