Wall clock time and date at job start Tue Mar 9 2021 13:10:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35995 * 116.99898 * 2 1 4 4 C 1.39156 * 120.07126 * 180.02562 * 3 2 1 5 5 O 1.35999 * 120.07260 * 359.94473 * 4 3 2 6 6 C 1.42901 * 116.99826 * 180.02562 * 5 4 3 7 7 C 1.50696 * 109.46697 * 180.02562 * 6 5 4 8 8 O 1.21281 * 120.00493 * 0.02562 * 7 6 5 9 9 N 1.34781 * 119.99693 * 180.02562 * 7 6 5 10 10 C 1.46501 * 120.00028 * 180.02562 * 9 7 6 11 11 H 1.08998 * 112.84769 * 327.68595 * 10 9 7 12 12 C 1.53787 * 113.61211 * 98.99105 * 10 9 7 13 13 C 1.53781 * 87.08022 * 89.11972 * 12 10 9 14 14 C 1.53006 * 113.61217 * 270.88216 * 13 12 10 15 15 C 1.52993 * 113.69187 * 139.99588 * 13 12 10 16 16 O 1.42893 * 109.47869 * 82.46002 * 15 13 12 17 17 C 1.53780 * 113.61339 * 196.48856 * 10 9 7 18 18 C 1.38563 * 119.85189 * 180.23277 * 4 3 2 19 19 C 1.38238 * 120.00098 * 359.48576 * 18 4 3 20 20 N 1.48010 * 119.92779 * 180.25589 * 19 18 4 21 21 O 1.21797 * 119.99812 * 0.25228 * 20 19 18 22 22 O 1.21803 * 119.99842 * 180.25502 * 20 19 18 23 23 C 1.38253 * 120.14769 * 0.50959 * 19 18 4 24 24 C 1.50699 * 119.92956 * 179.76520 * 23 19 18 25 25 O 1.42902 * 109.46659 * 74.98075 * 24 23 19 26 26 Si 1.86297 * 109.47241 * 194.98072 * 24 23 19 27 27 C 1.38248 * 120.14288 * 359.74965 * 23 19 18 28 28 H 1.08997 * 109.47154 * 180.02562 * 1 2 3 29 29 H 1.09002 * 109.47175 * 300.00352 * 1 2 3 30 30 H 1.09001 * 109.47303 * 60.00002 * 1 2 3 31 31 H 1.09006 * 109.46789 * 60.01060 * 6 5 4 32 32 H 1.08998 * 109.47293 * 300.00561 * 6 5 4 33 33 H 0.96999 * 120.00195 * 0.02562 * 9 7 6 34 34 H 1.09002 * 113.61233 * 203.66359 * 12 10 9 35 35 H 1.08996 * 113.61372 * 334.56898 * 12 10 9 36 36 H 1.09004 * 109.47151 * 150.03385 * 14 13 12 37 37 H 1.08995 * 109.47194 * 270.03382 * 14 13 12 38 38 H 1.09001 * 109.46702 * 30.03487 * 14 13 12 39 39 H 1.09002 * 109.47036 * 202.46558 * 15 13 12 40 40 H 1.09001 * 109.47263 * 322.45527 * 15 13 12 41 41 H 0.96692 * 114.00714 * 179.97438 * 16 15 13 42 42 H 1.08997 * 113.61856 * 25.43285 * 17 10 9 43 43 H 1.09005 * 113.61230 * 156.34008 * 17 10 9 44 44 H 1.08006 * 119.99595 * 179.71822 * 18 4 3 45 45 H 1.08998 * 109.47143 * 314.97933 * 24 23 19 46 46 H 0.96704 * 113.99656 * 179.97438 * 25 24 23 47 47 H 1.48494 * 110.00280 * 178.68175 * 26 24 23 48 48 H 1.48501 * 109.99914 * 300.00185 * 26 24 23 49 49 H 1.08001 * 119.99872 * 179.97438 * 27 23 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2863 -0.0005 5 8 4.1796 0.1476 0.0001 6 6 5.6004 0.3006 0.0000 7 6 6.2518 -1.0582 0.0001 8 8 5.5669 -2.0592 -0.0003 9 7 7.5957 -1.1613 0.0006 10 6 8.2291 -2.4823 0.0001 11 1 7.6464 -3.2312 0.5364 12 6 8.6946 -2.9417 -1.3917 13 6 10.0304 -2.2425 -1.0892 14 6 10.0602 -0.7708 -1.5067 15 6 11.2553 -3.0218 -1.5720 16 8 11.4681 -2.7624 -2.9609 17 6 9.7135 -2.4538 0.4007 18 6 4.0603 2.5233 0.0043 19 6 3.3030 3.6798 -0.0010 20 7 3.9716 5.0003 -0.0015 21 8 5.1877 5.0671 -0.0018 22 8 3.3056 6.0201 -0.0015 23 6 1.9224 3.6058 -0.0006 24 6 1.1017 4.8696 -0.0011 25 8 1.1348 5.4585 -1.3027 26 14 -0.6594 4.4667 0.4536 27 6 1.2932 2.3748 -0.0001 28 1 -0.3633 -1.0276 0.0005 29 1 -0.3633 0.5139 0.8900 30 1 -0.3634 0.5138 -0.8900 31 1 5.9065 0.8507 0.8899 32 1 5.9066 0.8500 -0.8902 33 1 8.1435 -0.3608 0.0013 34 1 8.7803 -4.0241 -1.4882 35 1 8.1385 -2.4854 -2.2107 36 1 10.7282 -0.2190 -0.8454 37 1 10.4180 -0.6915 -2.5332 38 1 9.0555 -0.3536 -1.4389 39 1 12.1320 -2.7082 -1.0052 40 1 11.0891 -4.0887 -1.4229 41 1 12.2305 -3.2246 -3.3352 42 1 9.9802 -1.6037 1.0286 43 1 10.0779 -3.4028 0.7942 44 1 5.1386 2.5839 0.0085 45 1 1.5132 5.5704 0.7253 46 1 0.6260 6.2775 -1.3769 47 1 -1.4722 5.7089 0.4877 48 1 -1.2320 3.5119 -0.5292 49 1 0.2146 2.3196 0.0007 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17058578_4549636.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:43 Heat of formation + Delta-G solvation = -113.130573 kcal Electronic energy + Delta-G solvation = -36197.764477 eV Core-core repulsion = 31098.065706 eV Total energy + Delta-G solvation = -5099.698771 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.160 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -43.41017 -42.16803 -41.70967 -40.38693 -39.41958 -39.07740 -37.78104 -37.29082 -37.21539 -34.63415 -32.78727 -32.58706 -30.87152 -29.57430 -28.79103 -27.93259 -27.48138 -26.81616 -25.80799 -24.10864 -23.23187 -22.82819 -21.74893 -20.75416 -19.93367 -19.58434 -19.47356 -18.92379 -18.67168 -18.36701 -18.26621 -18.03239 -17.78904 -17.72535 -17.02191 -16.86018 -16.48904 -16.11767 -16.05539 -15.81569 -15.59527 -15.50426 -15.14246 -14.75360 -14.47215 -14.32483 -14.21262 -14.04913 -13.88991 -13.65421 -13.52663 -13.26027 -13.03625 -12.92503 -12.69219 -12.60187 -12.42506 -12.41470 -12.36892 -12.32862 -12.19352 -11.91829 -11.82692 -11.45864 -11.28831 -11.08846 -10.77361 -10.49449 -10.41729 -10.14392 -9.51263 -5.01679 -1.34434 -0.45206 0.17068 0.29570 1.13384 1.19964 1.34289 1.51752 1.82487 1.86089 1.89259 2.29749 2.89215 3.13325 3.18166 3.27726 3.42268 3.43146 3.48050 3.60498 3.60822 3.75428 3.83688 3.91085 3.93832 4.01857 4.03344 4.11833 4.17869 4.19810 4.29238 4.36402 4.47899 4.56671 4.59861 4.60063 4.69669 4.73287 4.74252 4.78195 4.88686 4.90984 4.99864 5.08428 5.17761 5.26118 5.32884 5.53185 5.59236 6.01775 6.32967 6.50193 6.51615 6.89917 7.02599 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.000 4.000 2 O -0.306 6.306 3 C 0.168 3.832 4 C 0.101 3.899 5 O -0.290 6.290 6 C 0.026 3.974 7 C 0.517 3.483 8 O -0.563 6.563 9 N -0.694 5.694 10 C 0.117 3.883 11 H 0.087 0.913 12 C -0.143 4.143 13 C -0.085 4.085 14 C -0.134 4.134 15 C 0.087 3.913 16 O -0.593 6.593 17 C -0.117 4.117 18 C -0.109 4.109 19 C -0.045 4.045 20 N 0.038 4.962 21 O -0.191 6.191 22 O -0.155 6.155 23 C 0.004 3.996 24 C -0.106 4.106 25 O -0.547 6.547 26 Si 0.770 3.230 27 C -0.172 4.172 28 H 0.125 0.875 29 H 0.090 0.910 30 H 0.070 0.930 31 H 0.133 0.867 32 H 0.125 0.875 33 H 0.419 0.581 34 H 0.091 0.909 35 H 0.053 0.947 36 H 0.074 0.926 37 H 0.053 0.947 38 H 0.063 0.937 39 H 0.059 0.941 40 H 0.054 0.946 41 H 0.394 0.606 42 H 0.096 0.904 43 H 0.112 0.888 44 H 0.186 0.814 45 H 0.102 0.898 46 H 0.400 0.600 47 H -0.277 1.277 48 H -0.269 1.269 49 H 0.183 0.817 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.778 -1.712 4.473 4.852 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 O -0.217 6.217 3 C 0.119 3.881 4 C 0.054 3.946 5 O -0.202 6.202 6 C -0.052 4.052 7 C 0.303 3.697 8 O -0.441 6.441 9 N -0.350 5.350 10 C 0.012 3.988 11 H 0.105 0.895 12 C -0.182 4.182 13 C -0.085 4.085 14 C -0.191 4.191 15 C 0.009 3.991 16 O -0.401 6.401 17 C -0.155 4.155 18 C -0.129 4.129 19 C -0.129 4.129 20 N 0.552 4.448 21 O -0.400 6.400 22 O -0.372 6.372 23 C 0.002 3.998 24 C -0.212 4.212 25 O -0.357 6.357 26 Si 0.671 3.329 27 C -0.191 4.191 28 H 0.143 0.857 29 H 0.109 0.891 30 H 0.088 0.912 31 H 0.151 0.849 32 H 0.142 0.858 33 H 0.259 0.741 34 H 0.110 0.890 35 H 0.071 0.929 36 H 0.093 0.907 37 H 0.073 0.927 38 H 0.082 0.918 39 H 0.077 0.923 40 H 0.072 0.928 41 H 0.243 0.757 42 H 0.114 0.886 43 H 0.131 0.869 44 H 0.203 0.797 45 H 0.120 0.880 46 H 0.252 0.748 47 H -0.203 1.203 48 H -0.196 1.196 49 H 0.200 0.800 Dipole moment (debyes) X Y Z Total from point charges -0.937 -3.582 4.197 5.596 hybrid contribution 1.124 1.484 -1.249 2.241 sum 0.187 -2.098 2.948 3.623 Atomic orbital electron populations 1.23738 0.75020 1.06979 1.03608 1.86321 1.24511 1.24556 1.86358 1.18638 0.89257 0.86207 0.93978 1.17927 0.88621 0.85221 1.02802 1.86301 1.18395 1.26786 1.88750 1.22920 0.78863 0.96015 1.07357 1.20337 0.82995 0.90479 0.75877 1.90778 1.63887 1.39765 1.49670 1.45669 1.05092 1.09836 1.74373 1.21838 0.94523 0.84774 0.97635 0.89521 1.23529 0.96594 1.01125 0.96913 1.21962 0.93713 0.96603 0.96266 1.21684 1.02119 0.93120 1.02175 1.22198 0.96964 0.98140 0.81792 1.86434 1.54504 1.74246 1.24958 1.23364 0.92100 1.05076 0.94959 1.20901 1.03047 0.88058 1.00881 1.20539 0.92559 0.82263 1.17534 1.43552 1.00828 1.03198 0.97211 1.94515 0.96321 1.94051 1.55070 1.94481 1.64611 1.25254 1.52898 1.19117 0.90348 0.95899 0.94450 1.25409 1.11930 0.94040 0.89864 1.86481 1.75723 1.44856 1.28654 0.94353 0.70525 0.80974 0.87088 1.21165 1.02105 0.88602 1.07246 0.85715 0.89133 0.91188 0.84909 0.85765 0.74069 0.89031 0.92856 0.90723 0.92743 0.91834 0.92324 0.92797 0.75666 0.88576 0.86947 0.79699 0.88001 0.74824 1.20307 1.19588 0.79987 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 0.00 9.81 113.37 1.11 1.11 16 2 O -0.31 -0.88 10.28 -79.63 -0.82 -1.70 16 3 C 0.17 0.37 6.70 22.57 0.15 0.53 16 4 C 0.10 0.29 6.70 22.57 0.15 0.44 16 5 O -0.29 -1.50 9.45 -67.12 -0.63 -2.14 16 6 C 0.03 -0.07 5.22 71.23 0.37 0.31 16 7 C 0.52 1.66 7.91 87.66 0.69 2.36 16 8 O -0.56 -8.04 16.22 16.00 0.26 -7.78 16 9 N -0.69 1.96 4.47 -440.03 -1.97 -0.01 16 10 C 0.12 -0.14 4.20 45.52 0.19 0.06 16 11 H 0.09 0.23 7.68 -2.39 -0.02 0.22 16 12 C -0.14 -0.08 6.98 31.12 0.22 0.14 16 13 C -0.09 0.27 1.19 -51.65 -0.06 0.21 16 14 C -0.13 0.45 8.63 71.98 0.62 1.07 16 15 C 0.09 -0.29 6.52 71.98 0.47 0.18 16 16 O -0.59 -0.06 12.54 -148.98 -1.87 -1.93 16 17 C -0.12 0.76 6.97 31.12 0.22 0.98 16 18 C -0.11 -0.12 8.54 22.35 0.19 0.07 16 19 C -0.04 -0.22 6.85 36.38 0.25 0.03 16 20 N 0.04 0.35 4.45 -46.46 -0.21 0.15 16 21 O -0.19 -1.99 18.44 18.89 0.35 -1.64 16 22 O -0.16 -1.63 14.62 25.10 0.37 -1.26 16 23 C 0.00 0.01 5.29 -19.86 -0.11 -0.10 16 24 C -0.11 -0.03 1.73 71.24 0.12 0.09 16 25 O -0.55 -1.81 11.77 -129.63 -1.53 -3.33 16 26 Si 0.77 -3.86 30.19 68.60 2.07 -1.79 16 27 C -0.17 0.15 7.65 22.35 0.17 0.32 16 28 H 0.12 -1.05 8.14 -2.39 -0.02 -1.07 16 29 H 0.09 -0.98 7.66 -2.39 -0.02 -1.00 16 30 H 0.07 -0.52 7.66 -2.39 -0.02 -0.54 16 31 H 0.13 -1.25 7.65 -2.38 -0.02 -1.27 16 32 H 0.12 -0.98 7.67 -2.39 -0.02 -1.00 16 33 H 0.42 -3.77 6.52 -92.71 -0.60 -4.37 16 34 H 0.09 0.03 7.97 -2.39 -0.02 0.01 16 35 H 0.05 0.26 8.10 -2.39 -0.02 0.24 16 36 H 0.07 -0.46 8.14 -2.38 -0.02 -0.48 16 37 H 0.05 0.08 7.14 -2.39 -0.02 0.06 16 38 H 0.06 -0.33 5.30 -2.39 -0.01 -0.34 16 39 H 0.06 -0.34 8.14 -2.39 -0.02 -0.35 16 40 H 0.05 -0.26 7.95 -2.39 -0.02 -0.27 16 41 H 0.39 -3.02 9.12 -74.06 -0.68 -3.70 16 42 H 0.10 -0.88 8.10 -2.39 -0.02 -0.90 16 43 H 0.11 -0.95 8.10 -2.38 -0.02 -0.97 16 44 H 0.19 -0.74 5.85 -2.91 -0.02 -0.76 16 45 H 0.10 0.01 6.07 -2.39 -0.01 0.00 16 46 H 0.40 -1.72 8.74 -74.05 -0.65 -2.37 16 47 H -0.28 0.13 7.11 99.48 0.71 0.83 16 48 H -0.27 0.55 6.74 99.48 0.67 1.22 16 49 H 0.18 -1.05 3.13 -2.91 -0.01 -1.06 16 Total: 0.00 -31.45 402.03 -0.08 -31.53 By element: Atomic # 1 Polarization: -17.01 SS G_CDS: -0.87 Total: -17.88 kcal Atomic # 6 Polarization: 3.02 SS G_CDS: 4.76 Total: 7.78 kcal Atomic # 7 Polarization: 2.31 SS G_CDS: -2.17 Total: 0.14 kcal Atomic # 8 Polarization: -15.91 SS G_CDS: -3.87 Total: -19.78 kcal Atomic # 14 Polarization: -3.86 SS G_CDS: 2.07 Total: -1.79 kcal Total: -31.45 -0.08 -31.53 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17058578_4549636.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -81.603 kcal (2) G-P(sol) polarization free energy of solvation -31.451 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.054 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.077 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.528 kcal (6) G-S(sol) free energy of system = (1) + (5) -113.131 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds