Wall clock time and date at job start Tue Mar 9 2021 13:10:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.52993 * 112.90938 * 2 1 4 4 O 1.42903 * 109.47127 * 48.74836 * 3 2 1 5 5 C 1.53962 * 113.66529 * 131.30042 * 2 1 3 6 6 C 1.53782 * 87.11063 * 139.88900 * 5 2 1 7 7 H 1.08997 * 113.61225 * 89.18406 * 6 5 2 8 8 N 1.46499 * 113.61191 * 220.09091 * 6 5 2 9 9 C 1.34783 * 119.99531 * 252.49880 * 8 6 5 10 10 O 1.21278 * 120.00062 * 359.97438 * 9 8 6 11 11 C 1.50703 * 119.99755 * 180.02562 * 9 8 6 12 12 O 1.42895 * 109.47034 * 179.97438 * 11 9 8 13 13 C 1.35901 * 116.99884 * 180.02562 * 12 11 9 14 14 C 1.38718 * 120.05505 * 179.71935 * 13 12 11 15 15 N 1.48004 * 120.02618 * 0.02626 * 14 13 12 16 16 O 1.21798 * 119.99770 * 179.97438 * 15 14 13 17 17 O 1.21795 * 120.00271 * 359.97438 * 15 14 13 18 18 C 1.38163 * 119.94222 * 179.74539 * 14 13 12 19 19 C 1.38243 * 120.05716 * 0.53507 * 18 14 13 20 20 C 1.50698 * 119.94481 * 179.72480 * 19 18 14 21 21 O 1.42901 * 109.47027 * 300.01721 * 20 19 18 22 22 Si 1.86302 * 109.47165 * 180.02562 * 20 19 18 23 23 C 1.38288 * 120.11012 * 359.74440 * 19 18 14 24 24 C 1.38121 * 120.05562 * 359.97415 * 23 19 18 25 25 C 1.53781 * 87.08260 * 334.63747 * 6 5 2 26 26 H 1.09004 * 109.47331 * 191.25007 * 1 2 3 27 27 H 1.08994 * 109.47141 * 311.25254 * 1 2 3 28 28 H 1.09001 * 109.47183 * 71.25383 * 1 2 3 29 29 H 1.09003 * 109.47185 * 168.74946 * 3 2 1 30 30 H 1.08999 * 109.47292 * 288.74754 * 3 2 1 31 31 H 0.96695 * 113.99825 * 180.02562 * 4 3 2 32 32 H 1.08997 * 113.53543 * 25.33574 * 5 2 1 33 33 H 1.08998 * 113.73879 * 254.47172 * 5 2 1 34 34 H 0.96997 * 120.00777 * 72.49903 * 8 6 5 35 35 H 1.08994 * 109.47288 * 300.00303 * 11 9 8 36 36 H 1.09007 * 109.46858 * 60.00059 * 11 9 8 37 37 H 1.08004 * 119.97323 * 180.27910 * 18 14 13 38 38 H 1.08996 * 109.47352 * 60.01836 * 20 19 18 39 39 H 0.96697 * 114.00141 * 179.97438 * 21 20 19 40 40 H 1.48494 * 110.00186 * 59.99481 * 22 20 19 41 41 H 1.48502 * 109.99872 * 181.31846 * 22 20 19 42 42 H 1.08003 * 119.97098 * 180.02562 * 23 19 18 43 43 H 1.07997 * 120.03016 * 180.02562 * 24 23 19 44 44 H 1.09002 * 113.61445 * 139.98212 * 25 6 5 45 45 H 1.09002 * 113.61408 * 270.79943 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.1256 1.4092 0.0000 4 8 1.4927 2.1938 1.0129 5 6 2.1480 -0.9307 1.0594 6 6 3.1927 -1.3160 -0.0012 7 1 4.0724 -0.6724 -0.0016 8 7 3.5292 -2.7419 -0.0026 9 6 4.7243 -3.1526 0.4661 10 8 5.5212 -2.3419 0.8885 11 6 5.0707 -4.6193 0.4642 12 8 6.3809 -4.8000 1.0050 13 6 6.8495 -6.0738 1.0744 14 6 8.1160 -6.3214 1.5832 15 7 8.9585 -5.1983 2.0518 16 8 10.0702 -5.4164 2.4989 17 8 8.5400 -4.0562 1.9904 18 6 8.5880 -7.6177 1.6575 19 6 7.8037 -8.6666 1.2151 20 6 8.3235 -10.0790 1.2916 21 8 9.5187 -10.1894 0.5161 22 14 7.0389 -11.2507 0.6223 23 6 6.5430 -8.4219 0.7021 24 6 6.0643 -7.1282 0.6310 25 6 2.1460 -0.9292 -1.0593 26 1 -0.3634 -1.0079 0.2005 27 1 -0.3633 0.6776 0.7726 28 1 -0.3633 0.3303 -0.9732 29 1 3.1954 1.3516 0.2005 30 1 1.9628 1.8725 -0.9731 31 1 1.8213 3.1014 1.0700 32 1 1.4955 -1.7543 1.3490 33 1 2.5688 -0.4030 1.9153 34 1 2.8920 -3.3903 -0.3408 35 1 4.3481 -5.1641 1.0718 36 1 5.0445 -4.9975 -0.5578 37 1 9.5723 -7.8115 2.0578 38 1 8.5394 -10.3310 2.3298 39 1 9.9099 -11.0737 0.5201 40 1 6.7357 -10.9176 -0.7927 41 1 7.5267 -12.6498 0.7216 42 1 5.9320 -9.2430 0.3574 43 1 5.0795 -6.9376 0.2306 44 1 2.5650 -0.3989 -1.9146 45 1 1.4939 -1.7528 -1.3500 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17058578_4549638.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:47 Heat of formation + Delta-G solvation = -88.628545 kcal Electronic energy + Delta-G solvation = -31024.617816 eV Core-core repulsion = 26400.201344 eV Total energy + Delta-G solvation = -4624.416472 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.144 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -42.98234 -41.81439 -41.35402 -40.17981 -39.21831 -37.68731 -37.20430 -37.08391 -34.88993 -33.50366 -32.46198 -31.02551 -29.43488 -27.56048 -27.42926 -26.88576 -26.66852 -24.32984 -23.13086 -22.59741 -21.73706 -20.37567 -19.59355 -19.42414 -19.06761 -18.80103 -18.41321 -18.33689 -18.27809 -17.64885 -17.52876 -17.15068 -16.63667 -16.25248 -16.12705 -15.89182 -15.63010 -15.60662 -15.18160 -14.58835 -14.46439 -14.25838 -14.23648 -13.95461 -13.83693 -13.69634 -13.35572 -13.21174 -13.07012 -12.90244 -12.70549 -12.45118 -12.16647 -12.07381 -11.88486 -11.77437 -11.70222 -11.55790 -11.36550 -10.94600 -10.88950 -10.84385 -10.80330 -10.15316 -9.84993 -5.23997 -1.08411 -0.33126 0.42224 0.57130 0.99219 1.11849 1.34573 1.41585 1.70860 1.95732 2.23961 2.88758 2.98227 3.07292 3.11684 3.28061 3.42711 3.44227 3.52188 3.57389 3.58431 3.60258 3.72891 3.76117 3.91415 4.06484 4.12350 4.19031 4.31272 4.34762 4.42568 4.46874 4.49572 4.58270 4.65671 4.74068 4.74865 4.86866 4.95256 4.96322 5.09317 5.16398 5.33388 5.41770 5.48864 5.74444 6.19012 6.27322 6.65346 6.97776 7.04535 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.130 4.130 2 C -0.081 4.081 3 C 0.096 3.904 4 O -0.569 6.569 5 C -0.139 4.139 6 C 0.123 3.877 7 H 0.118 0.882 8 N -0.717 5.717 9 C 0.514 3.486 10 O -0.496 6.496 11 C 0.030 3.970 12 O -0.253 6.253 13 C 0.200 3.800 14 C -0.076 4.076 15 N 0.029 4.971 16 O -0.178 6.178 17 O -0.118 6.118 18 C 0.010 3.990 19 C -0.110 4.110 20 C -0.074 4.074 21 O -0.535 6.535 22 Si 0.684 3.316 23 C -0.022 4.022 24 C -0.209 4.209 25 C -0.134 4.134 26 H 0.055 0.945 27 H 0.069 0.931 28 H 0.055 0.945 29 H 0.050 0.950 30 H 0.050 0.950 31 H 0.382 0.618 32 H 0.087 0.913 33 H 0.077 0.923 34 H 0.402 0.598 35 H 0.103 0.897 36 H 0.102 0.898 37 H 0.163 0.837 38 H 0.085 0.915 39 H 0.386 0.614 40 H -0.251 1.251 41 H -0.255 1.255 42 H 0.149 0.851 43 H 0.157 0.843 44 H 0.078 0.922 45 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.584 -6.050 -3.037 10.932 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.187 4.187 2 C -0.082 4.082 3 C 0.018 3.982 4 O -0.375 6.375 5 C -0.178 4.178 6 C 0.018 3.982 7 H 0.136 0.864 8 N -0.371 5.371 9 C 0.298 3.702 10 O -0.368 6.368 11 C -0.048 4.048 12 O -0.163 6.163 13 C 0.150 3.850 14 C -0.160 4.160 15 N 0.549 4.451 16 O -0.387 6.387 17 O -0.342 6.342 18 C -0.009 4.009 19 C -0.111 4.111 20 C -0.183 4.183 21 O -0.343 6.343 22 Si 0.584 3.416 23 C -0.040 4.040 24 C -0.228 4.228 25 C -0.173 4.173 26 H 0.074 0.926 27 H 0.088 0.912 28 H 0.074 0.926 29 H 0.068 0.932 30 H 0.068 0.932 31 H 0.229 0.771 32 H 0.106 0.894 33 H 0.096 0.904 34 H 0.237 0.763 35 H 0.121 0.879 36 H 0.119 0.881 37 H 0.181 0.819 38 H 0.103 0.897 39 H 0.234 0.766 40 H -0.176 1.176 41 H -0.179 1.179 42 H 0.167 0.833 43 H 0.175 0.825 44 H 0.097 0.903 45 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -8.863 -6.371 -3.484 11.458 hybrid contribution 1.262 -0.101 -0.484 1.355 sum -7.601 -6.472 -3.968 10.743 Atomic orbital electron populations 1.21587 0.92779 1.01957 1.02407 1.21597 0.96710 0.92908 0.96993 1.21917 0.95339 0.90138 0.90787 1.86450 1.65918 1.27633 1.57458 1.23601 0.97456 0.99067 0.97678 1.22650 0.97429 0.81176 0.96909 0.86397 1.45784 1.17143 1.08980 1.65180 1.19869 0.82318 0.89407 0.78644 1.90860 1.48047 1.54532 1.43367 1.22748 0.84246 0.96676 1.01179 1.86503 1.31567 1.21733 1.76462 1.18680 0.90299 0.85163 0.90881 1.20551 0.92022 0.88358 1.15079 1.43321 1.00855 1.02107 0.98786 1.94549 1.05601 1.90882 1.47629 1.94695 1.76257 1.05442 1.57808 1.20797 1.00375 0.87871 0.91815 1.19141 0.94586 0.94249 1.03161 1.24769 0.95175 0.98688 0.99686 1.86585 1.39293 1.36150 1.72279 0.95253 0.85018 0.77583 0.83741 1.21188 0.94225 0.96753 0.91808 1.21234 1.02065 0.91521 1.07953 1.23463 0.97299 0.99423 0.97074 0.92640 0.91226 0.92575 0.93155 0.93171 0.77050 0.89413 0.90397 0.76334 0.87941 0.88066 0.81946 0.89726 0.76569 1.17561 1.17932 0.83339 0.82501 0.90295 0.88786 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 0.12 9.09 37.16 0.34 0.46 16 2 C -0.08 0.10 1.20 -153.60 -0.18 -0.08 16 3 C 0.10 -0.08 6.40 37.15 0.24 0.15 16 4 O -0.57 -0.17 12.64 -35.23 -0.45 -0.62 16 5 C -0.14 0.10 7.00 -25.82 -0.18 -0.08 16 6 C 0.12 -0.14 3.89 -67.12 -0.26 -0.40 16 7 H 0.12 0.10 6.99 -51.93 -0.36 -0.26 16 8 N -0.72 1.70 5.35 -53.02 -0.28 1.42 16 9 C 0.51 0.40 7.91 -10.98 -0.09 0.32 16 10 O -0.50 -3.19 16.10 -14.35 -0.23 -3.42 16 11 C 0.03 -0.07 5.22 36.01 0.19 0.12 16 12 O -0.25 -0.65 7.68 -49.78 -0.38 -1.03 16 13 C 0.20 0.25 6.67 -39.22 -0.26 -0.01 16 14 C -0.08 -0.26 6.87 -79.80 -0.55 -0.81 16 15 N 0.03 0.21 4.45 34.03 0.15 0.36 16 16 O -0.18 -1.36 18.45 -29.46 -0.54 -1.91 16 17 O -0.12 -1.06 17.24 -36.49 -0.63 -1.69 16 18 C 0.01 0.01 9.11 -39.61 -0.36 -0.35 16 19 C -0.11 0.10 5.42 -104.60 -0.57 -0.46 16 20 C -0.07 0.17 2.81 36.00 0.10 0.28 16 21 O -0.54 0.34 12.74 -35.23 -0.45 -0.11 16 22 Si 0.68 -2.47 29.78 -169.99 -5.06 -7.54 16 23 C -0.02 0.06 8.66 -39.61 -0.34 -0.28 16 24 C -0.21 0.57 9.04 -39.44 -0.36 0.21 16 25 C -0.13 0.38 6.98 -25.92 -0.18 0.20 16 26 H 0.05 -0.10 7.95 -51.93 -0.41 -0.51 16 27 H 0.07 0.06 7.33 -51.93 -0.38 -0.32 16 28 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 29 H 0.05 -0.05 7.35 -51.93 -0.38 -0.43 16 30 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 31 H 0.38 -1.36 9.12 45.56 0.42 -0.94 16 32 H 0.09 -0.13 7.96 -51.93 -0.41 -0.55 16 33 H 0.08 0.09 8.10 -51.93 -0.42 -0.33 16 34 H 0.40 -2.38 8.73 -40.82 -0.36 -2.74 16 35 H 0.10 -0.58 7.66 -51.93 -0.40 -0.98 16 36 H 0.10 -0.55 7.66 -51.93 -0.40 -0.95 16 37 H 0.16 0.19 7.61 -52.48 -0.40 -0.21 16 38 H 0.08 -0.34 7.96 -51.93 -0.41 -0.75 16 39 H 0.39 -1.75 8.74 45.56 0.40 -1.35 16 40 H -0.25 0.21 7.11 56.52 0.40 0.62 16 41 H -0.25 0.29 7.11 56.52 0.40 0.69 16 42 H 0.15 -0.85 4.87 -52.48 -0.26 -1.11 16 43 H 0.16 -1.03 6.30 -52.49 -0.33 -1.36 16 44 H 0.08 -0.23 8.10 -51.93 -0.42 -0.65 16 45 H 0.09 -0.40 8.08 -51.93 -0.42 -0.81 16 LS Contribution 381.71 15.07 5.75 5.75 Total: 0.00 -13.89 381.71 -9.58 -23.48 By element: Atomic # 1 Polarization: -8.96 SS G_CDS: -4.99 Total: -13.95 kcal Atomic # 6 Polarization: 1.72 SS G_CDS: -2.47 Total: -0.74 kcal Atomic # 7 Polarization: 1.91 SS G_CDS: -0.13 Total: 1.78 kcal Atomic # 8 Polarization: -6.09 SS G_CDS: -2.68 Total: -8.77 kcal Atomic # 14 Polarization: -2.47 SS G_CDS: -5.06 Total: -7.54 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -13.89 -9.58 -23.48 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17058578_4549638.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.153 kcal (2) G-P(sol) polarization free energy of solvation -13.894 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -79.047 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.582 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.476 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.629 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds