Wall clock time and date at job start Tue Mar 9 2021 13:11:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35981 * 116.99677 * 2 1 4 4 C 1.38684 * 119.99866 * 180.02562 * 3 2 1 5 5 C 1.38151 * 119.99917 * 180.02562 * 4 3 2 6 6 C 1.50698 * 119.99894 * 179.97438 * 5 4 3 7 7 O 1.42899 * 109.47375 * 255.02382 * 6 5 4 8 8 Si 1.86301 * 109.47076 * 15.02544 * 6 5 4 9 9 C 1.38681 * 120.00146 * 0.02562 * 5 4 3 10 10 O 1.35976 * 119.99888 * 180.02562 * 9 5 4 11 11 C 1.42900 * 117.00041 * 179.97438 * 10 9 5 12 12 C 1.50698 * 109.47654 * 180.02562 * 11 10 9 13 13 O 1.21280 * 119.99599 * 359.97438 * 12 11 10 14 14 N 1.34773 * 120.00480 * 180.02562 * 12 11 10 15 15 C 1.46499 * 120.00250 * 179.97438 * 14 12 11 16 16 H 1.09008 * 112.84709 * 37.70459 * 15 14 12 17 17 C 1.53787 * 113.61376 * 168.89920 * 15 14 12 18 18 C 1.53775 * 87.07800 * 89.11878 * 17 15 14 19 19 C 1.52997 * 113.61401 * 270.79708 * 18 17 15 20 20 C 1.53002 * 113.61484 * 139.98190 * 18 17 15 21 21 O 1.42897 * 109.47649 * 181.52730 * 20 18 17 22 22 C 1.53777 * 87.17713 * 25.39073 * 18 17 15 23 23 C 1.38718 * 119.99809 * 0.27509 * 9 5 4 24 24 C 1.38118 * 120.00034 * 359.44754 * 23 9 5 25 25 H 1.09005 * 109.46814 * 180.02562 * 1 2 3 26 26 H 1.09003 * 109.47001 * 299.99606 * 1 2 3 27 27 H 1.09000 * 109.47246 * 59.99943 * 1 2 3 28 28 H 1.08000 * 119.99696 * 0.03960 * 4 3 2 29 29 H 1.09000 * 109.47155 * 135.02231 * 6 5 4 30 30 H 0.96703 * 113.99700 * 299.99925 * 7 6 5 31 31 H 1.48494 * 110.00119 * 60.00017 * 8 6 5 32 32 H 1.48497 * 109.99683 * 181.31844 * 8 6 5 33 33 H 1.08998 * 109.47236 * 60.00143 * 11 10 9 34 34 H 1.09005 * 109.47235 * 300.00396 * 11 10 9 35 35 H 0.96997 * 119.99920 * 359.97438 * 14 12 11 36 36 H 1.08992 * 113.61243 * 334.56757 * 17 15 14 37 37 H 1.09007 * 113.61224 * 203.66798 * 17 15 14 38 38 H 1.09002 * 109.47215 * 297.06654 * 19 18 17 39 39 H 1.09001 * 109.46950 * 57.07037 * 19 18 17 40 40 H 1.09000 * 109.47100 * 177.06993 * 19 18 17 41 41 H 1.08997 * 109.47160 * 61.52362 * 20 18 17 42 42 H 1.09004 * 109.46909 * 301.53127 * 20 18 17 43 43 H 0.96693 * 114.00488 * 179.97438 * 21 20 18 44 44 H 1.08999 * 113.61891 * 89.15314 * 22 18 17 45 45 H 1.09001 * 113.61575 * 220.05889 * 22 18 17 46 46 H 1.08005 * 120.00002 * 179.70234 * 23 9 5 47 47 H 1.07993 * 119.99615 * 180.30173 * 24 23 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2116 0.0000 4 6 3.4312 1.2843 -0.0005 5 6 4.0583 2.5152 0.0000 6 6 5.5632 2.5941 0.0000 7 8 6.0208 2.9662 1.3016 8 14 6.2722 0.9328 -0.4561 9 6 3.3030 3.6783 0.0016 10 8 3.9203 4.8899 0.0016 11 6 3.0804 6.0459 0.0027 12 6 3.9344 7.2875 0.0019 13 8 5.1435 7.1918 0.0010 14 7 3.3548 8.5043 0.0033 15 6 4.1852 9.7112 0.0031 16 1 5.0792 9.6098 -0.6124 17 6 3.3948 11.0026 -0.2666 18 6 3.1733 11.0909 1.2526 19 6 1.9167 10.3616 1.7321 20 6 3.2825 12.5130 1.8063 21 8 3.0979 12.4882 3.2230 22 6 4.4621 10.2673 1.4117 23 6 1.9177 3.6056 0.0085 24 6 1.2907 2.3750 0.0021 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3633 0.5138 0.8900 27 1 -0.3634 0.5138 -0.8900 28 1 4.0194 0.3785 -0.0016 29 1 5.8880 3.3394 -0.7261 30 1 5.6901 3.8229 1.6048 31 1 5.8039 0.5345 -1.8078 32 1 7.7559 0.9889 -0.4287 33 1 2.4518 6.0375 0.8932 34 1 2.4503 6.0382 -0.8867 35 1 2.3879 8.5808 0.0044 36 1 2.4775 10.8428 -0.8331 37 1 4.0050 11.8124 -0.6667 38 1 1.0356 10.8269 1.2902 39 1 1.9658 9.3156 1.4292 40 1 1.8535 10.4227 2.8186 41 1 2.5160 13.1401 1.3509 42 1 4.2677 12.9182 1.5752 43 1 3.1548 13.3576 3.6424 44 1 5.3646 10.8756 1.4713 45 1 4.4051 9.5147 2.1982 46 1 1.3295 4.5114 0.0146 47 1 0.2123 2.3185 0.0025 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17058578_4974302.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:00 Heat of formation + Delta-G solvation = -124.924152 kcal Electronic energy + Delta-G solvation = -29664.416895 eV Core-core repulsion = 25395.223151 eV Total energy + Delta-G solvation = -4269.193744 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -41.98112 -41.58753 -40.34819 -39.49210 -37.98286 -37.32540 -36.81106 -34.59464 -32.77330 -31.31224 -30.62358 -29.31016 -28.09352 -27.57709 -26.94594 -26.47959 -24.09983 -22.84390 -22.37494 -21.63700 -19.76954 -19.51536 -18.81955 -18.51218 -18.33358 -17.89267 -17.56734 -17.46109 -17.03857 -16.69048 -16.25897 -16.10934 -16.00701 -15.65107 -15.43537 -15.32720 -15.17089 -14.59736 -14.44984 -14.31306 -14.13067 -13.96666 -13.70125 -13.62904 -13.46965 -13.39091 -13.15238 -13.04623 -12.66544 -12.46392 -12.24470 -11.96877 -11.85447 -11.60700 -11.51202 -11.38811 -11.13843 -10.99864 -10.93802 -10.86649 -10.12653 -10.06047 -8.81093 -4.73057 0.08596 0.35924 1.35084 1.42540 1.55090 1.80165 2.15787 2.26425 2.47936 2.57288 2.99611 3.28156 3.36239 3.44855 3.55226 3.62855 3.67876 3.74347 3.83090 3.87752 3.97146 4.04401 4.09128 4.12785 4.13624 4.18244 4.34266 4.34829 4.37820 4.41272 4.44759 4.54223 4.56075 4.64002 4.66196 4.72922 4.80577 4.88578 5.00894 5.03883 5.06461 5.11874 5.19524 5.21760 5.41074 5.48690 6.07099 6.26890 6.39343 6.60644 6.76023 7.03461 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.313 6.313 3 C 0.103 3.897 4 C -0.103 4.103 5 C -0.098 4.098 6 C -0.072 4.072 7 O -0.533 6.533 8 Si 0.743 3.257 9 C 0.100 3.900 10 O -0.290 6.290 11 C 0.041 3.959 12 C 0.517 3.483 13 O -0.508 6.508 14 N -0.710 5.710 15 C 0.124 3.876 16 H 0.101 0.899 17 C -0.133 4.133 18 C -0.085 4.085 19 C -0.131 4.131 20 C 0.090 3.910 21 O -0.570 6.570 22 C -0.136 4.136 23 C -0.165 4.165 24 C -0.165 4.165 25 H 0.103 0.897 26 H 0.056 0.944 27 H 0.055 0.945 28 H 0.147 0.853 29 H 0.078 0.922 30 H 0.368 0.632 31 H -0.251 1.251 32 H -0.254 1.254 33 H 0.095 0.905 34 H 0.093 0.907 35 H 0.403 0.597 36 H 0.079 0.921 37 H 0.101 0.899 38 H 0.058 0.942 39 H 0.056 0.944 40 H 0.072 0.928 41 H 0.046 0.954 42 H 0.048 0.952 43 H 0.380 0.620 44 H 0.092 0.908 45 H 0.075 0.925 46 H 0.133 0.867 47 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.747 3.514 -0.539 8.524 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.227 6.227 3 C 0.058 3.942 4 C -0.121 4.121 5 C -0.099 4.099 6 C -0.181 4.181 7 O -0.339 6.339 8 Si 0.642 3.358 9 C 0.055 3.945 10 O -0.203 6.203 11 C -0.038 4.038 12 C 0.301 3.699 13 O -0.381 6.381 14 N -0.367 5.367 15 C 0.019 3.981 16 H 0.119 0.881 17 C -0.171 4.171 18 C -0.085 4.085 19 C -0.188 4.188 20 C 0.012 3.988 21 O -0.375 6.375 22 C -0.174 4.174 23 C -0.184 4.184 24 C -0.184 4.184 25 H 0.121 0.879 26 H 0.075 0.925 27 H 0.074 0.926 28 H 0.164 0.836 29 H 0.096 0.904 30 H 0.216 0.784 31 H -0.175 1.175 32 H -0.179 1.179 33 H 0.112 0.888 34 H 0.111 0.889 35 H 0.240 0.760 36 H 0.098 0.902 37 H 0.119 0.881 38 H 0.077 0.923 39 H 0.075 0.925 40 H 0.091 0.909 41 H 0.064 0.936 42 H 0.066 0.934 43 H 0.227 0.773 44 H 0.110 0.890 45 H 0.093 0.907 46 H 0.151 0.849 47 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -5.830 1.627 -1.273 6.185 hybrid contribution -1.494 2.799 -0.266 3.183 sum -7.324 4.425 -1.539 8.694 Atomic orbital electron populations 1.23102 0.78075 1.04388 1.01318 1.86114 1.21535 1.26171 1.88884 1.18811 0.91909 0.84570 0.98887 1.20059 0.91636 0.96766 1.03616 1.19485 0.96624 0.90025 1.03814 1.25372 0.91483 1.12377 0.88831 1.86706 1.73775 1.41971 1.31414 0.93022 0.79760 0.80275 0.82760 1.18660 0.90829 0.84581 1.00479 1.86111 1.33858 1.11057 1.89260 1.22447 0.93168 0.84147 1.04015 1.20025 0.88870 0.84099 0.76888 1.90793 1.14094 1.86487 1.46746 1.45790 1.10246 1.04638 1.76010 1.21840 0.94732 0.83206 0.98296 0.88121 1.23378 1.01107 0.97113 0.95513 1.21926 0.96811 0.94798 0.94938 1.21661 0.95292 0.99053 1.02843 1.22114 0.99372 0.95805 0.81463 1.86476 1.95666 1.35172 1.20232 1.23494 0.97362 0.99381 0.97195 1.21021 0.92826 0.98696 1.05860 1.21082 1.00324 0.91505 1.05473 0.87870 0.92540 0.92626 0.83633 0.90414 0.78363 1.17531 1.17899 0.88756 0.88875 0.75953 0.90243 0.88108 0.92287 0.92536 0.90917 0.93563 0.93365 0.77293 0.88957 0.90665 0.84925 0.84699 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.94 16 2 O -0.31 -0.45 10.50 -19.68 -0.21 -0.65 16 3 C 0.10 0.18 6.69 -39.24 -0.26 -0.09 16 4 C -0.10 -0.21 8.59 -39.45 -0.34 -0.55 16 5 C -0.10 -0.27 5.28 -104.49 -0.55 -0.82 16 6 C -0.07 -0.24 2.33 36.00 0.08 -0.16 16 7 O -0.53 -2.25 12.65 -35.23 -0.45 -2.70 16 8 Si 0.74 1.49 30.17 -169.99 -5.13 -3.63 16 9 C 0.10 0.20 6.62 -39.24 -0.26 -0.06 16 10 O -0.29 -0.69 8.56 -39.58 -0.34 -1.03 16 11 C 0.04 -0.05 5.22 36.00 0.19 0.14 16 12 C 0.52 0.62 7.91 -10.99 -0.09 0.53 16 13 O -0.51 -3.07 16.30 -14.35 -0.23 -3.31 16 14 N -0.71 1.11 4.39 -52.93 -0.23 0.88 16 15 C 0.12 -0.10 4.12 -67.03 -0.28 -0.38 16 16 H 0.10 0.07 7.83 -51.92 -0.41 -0.34 16 17 C -0.13 0.38 6.96 -25.92 -0.18 0.20 16 18 C -0.08 0.13 1.18 -153.70 -0.18 -0.05 16 19 C -0.13 0.23 8.77 37.16 0.33 0.55 16 20 C 0.09 -0.14 6.48 37.16 0.24 0.10 16 21 O -0.57 0.10 12.74 -35.23 -0.45 -0.34 16 22 C -0.14 0.02 7.04 -25.83 -0.18 -0.16 16 23 C -0.17 0.00 9.03 -39.45 -0.36 -0.36 16 24 C -0.17 -0.02 9.03 -39.45 -0.36 -0.38 16 25 H 0.10 -0.36 8.14 -51.93 -0.42 -0.79 16 26 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 27 H 0.06 -0.17 7.66 -51.93 -0.40 -0.56 16 28 H 0.15 0.07 5.13 -52.49 -0.27 -0.20 16 29 H 0.08 0.32 7.82 -51.93 -0.41 -0.08 16 30 H 0.37 1.07 8.60 45.56 0.39 1.46 16 31 H -0.25 -0.79 7.11 56.52 0.40 -0.38 16 32 H -0.25 -1.20 7.11 56.52 0.40 -0.80 16 33 H 0.09 -0.34 7.65 -51.93 -0.40 -0.73 16 34 H 0.09 -0.33 7.67 -51.93 -0.40 -0.72 16 35 H 0.40 -1.73 6.60 -40.82 -0.27 -2.00 16 36 H 0.08 -0.29 8.10 -51.93 -0.42 -0.71 16 37 H 0.10 -0.36 8.10 -51.93 -0.42 -0.78 16 38 H 0.06 -0.14 8.14 -51.93 -0.42 -0.57 16 39 H 0.06 -0.16 4.94 -51.93 -0.26 -0.42 16 40 H 0.07 0.02 7.44 -51.93 -0.39 -0.37 16 41 H 0.05 -0.11 8.14 -51.93 -0.42 -0.53 16 42 H 0.05 -0.11 7.98 -51.93 -0.41 -0.52 16 43 H 0.38 -1.54 9.12 45.56 0.42 -1.12 16 44 H 0.09 -0.03 7.99 -51.93 -0.41 -0.44 16 45 H 0.07 0.12 8.10 -51.93 -0.42 -0.30 16 46 H 0.13 -0.39 6.29 -52.48 -0.33 -0.72 16 47 H 0.14 -0.30 6.29 -52.49 -0.33 -0.63 16 LS Contribution 379.97 15.07 5.73 5.73 Total: 0.00 -9.92 379.97 -8.50 -18.43 By element: Atomic # 1 Polarization: -6.83 SS G_CDS: -5.99 Total: -12.83 kcal Atomic # 6 Polarization: 0.66 SS G_CDS: -1.20 Total: -0.54 kcal Atomic # 7 Polarization: 1.11 SS G_CDS: -0.23 Total: 0.88 kcal Atomic # 8 Polarization: -6.36 SS G_CDS: -1.67 Total: -8.03 kcal Atomic # 14 Polarization: 1.49 SS G_CDS: -5.13 Total: -3.63 kcal Total LS contribution 5.73 Total: 5.73 kcal Total: -9.92 -8.50 -18.43 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17058578_4974302.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.494 kcal (2) G-P(sol) polarization free energy of solvation -9.925 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -116.419 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.505 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.430 kcal (6) G-S(sol) free energy of system = (1) + (5) -124.924 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds