Wall clock time and date at job start Tue Mar 9 2021 13:10:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35981 * 116.99677 * 2 1 4 4 C 1.38684 * 119.99866 * 180.02562 * 3 2 1 5 5 C 1.38151 * 119.99917 * 180.02562 * 4 3 2 6 6 C 1.50698 * 119.99894 * 179.97438 * 5 4 3 7 7 O 1.42899 * 109.47375 * 255.02382 * 6 5 4 8 8 Si 1.86301 * 109.47076 * 15.02544 * 6 5 4 9 9 C 1.38681 * 120.00146 * 0.02562 * 5 4 3 10 10 O 1.35976 * 119.99888 * 180.02562 * 9 5 4 11 11 C 1.42900 * 117.00041 * 179.97438 * 10 9 5 12 12 C 1.50698 * 109.47654 * 180.02562 * 11 10 9 13 13 O 1.21280 * 119.99599 * 359.97438 * 12 11 10 14 14 N 1.34773 * 120.00480 * 180.02562 * 12 11 10 15 15 C 1.46499 * 120.00250 * 179.97438 * 14 12 11 16 16 H 1.09008 * 112.84709 * 37.70459 * 15 14 12 17 17 C 1.53787 * 113.61376 * 168.89920 * 15 14 12 18 18 C 1.53775 * 87.07800 * 89.11878 * 17 15 14 19 19 C 1.52997 * 113.61401 * 270.79708 * 18 17 15 20 20 C 1.53002 * 113.61484 * 139.98190 * 18 17 15 21 21 O 1.42897 * 109.47649 * 181.52730 * 20 18 17 22 22 C 1.53777 * 87.17713 * 25.39073 * 18 17 15 23 23 C 1.38718 * 119.99809 * 0.27509 * 9 5 4 24 24 C 1.38118 * 120.00034 * 359.44754 * 23 9 5 25 25 H 1.09005 * 109.46814 * 180.02562 * 1 2 3 26 26 H 1.09003 * 109.47001 * 299.99606 * 1 2 3 27 27 H 1.09000 * 109.47246 * 59.99943 * 1 2 3 28 28 H 1.08000 * 119.99696 * 0.03960 * 4 3 2 29 29 H 1.09000 * 109.47155 * 135.02231 * 6 5 4 30 30 H 0.96703 * 113.99700 * 299.99925 * 7 6 5 31 31 H 1.48494 * 110.00119 * 60.00017 * 8 6 5 32 32 H 1.48497 * 109.99683 * 181.31844 * 8 6 5 33 33 H 1.08998 * 109.47236 * 60.00143 * 11 10 9 34 34 H 1.09005 * 109.47235 * 300.00396 * 11 10 9 35 35 H 0.96997 * 119.99920 * 359.97438 * 14 12 11 36 36 H 1.08992 * 113.61243 * 334.56757 * 17 15 14 37 37 H 1.09007 * 113.61224 * 203.66798 * 17 15 14 38 38 H 1.09002 * 109.47215 * 297.06654 * 19 18 17 39 39 H 1.09001 * 109.46950 * 57.07037 * 19 18 17 40 40 H 1.09000 * 109.47100 * 177.06993 * 19 18 17 41 41 H 1.08997 * 109.47160 * 61.52362 * 20 18 17 42 42 H 1.09004 * 109.46909 * 301.53127 * 20 18 17 43 43 H 0.96693 * 114.00488 * 179.97438 * 21 20 18 44 44 H 1.08999 * 113.61891 * 89.15314 * 22 18 17 45 45 H 1.09001 * 113.61575 * 220.05889 * 22 18 17 46 46 H 1.08005 * 120.00002 * 179.70234 * 23 9 5 47 47 H 1.07993 * 119.99615 * 180.30173 * 24 23 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2116 0.0000 4 6 3.4312 1.2843 -0.0005 5 6 4.0583 2.5152 0.0000 6 6 5.5632 2.5941 0.0000 7 8 6.0208 2.9662 1.3016 8 14 6.2722 0.9328 -0.4561 9 6 3.3030 3.6783 0.0016 10 8 3.9203 4.8899 0.0016 11 6 3.0804 6.0459 0.0027 12 6 3.9344 7.2875 0.0019 13 8 5.1435 7.1918 0.0010 14 7 3.3548 8.5043 0.0033 15 6 4.1852 9.7112 0.0031 16 1 5.0792 9.6098 -0.6124 17 6 3.3948 11.0026 -0.2666 18 6 3.1733 11.0909 1.2526 19 6 1.9167 10.3616 1.7321 20 6 3.2825 12.5130 1.8063 21 8 3.0979 12.4882 3.2230 22 6 4.4621 10.2673 1.4117 23 6 1.9177 3.6056 0.0085 24 6 1.2907 2.3750 0.0021 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3633 0.5138 0.8900 27 1 -0.3634 0.5138 -0.8900 28 1 4.0194 0.3785 -0.0016 29 1 5.8880 3.3394 -0.7261 30 1 5.6901 3.8229 1.6048 31 1 5.8039 0.5345 -1.8078 32 1 7.7559 0.9889 -0.4287 33 1 2.4518 6.0375 0.8932 34 1 2.4503 6.0382 -0.8867 35 1 2.3879 8.5808 0.0044 36 1 2.4775 10.8428 -0.8331 37 1 4.0050 11.8124 -0.6667 38 1 1.0356 10.8269 1.2902 39 1 1.9658 9.3156 1.4292 40 1 1.8535 10.4227 2.8186 41 1 2.5160 13.1401 1.3509 42 1 4.2677 12.9182 1.5752 43 1 3.1548 13.3576 3.6424 44 1 5.3646 10.8756 1.4713 45 1 4.4051 9.5147 2.1982 46 1 1.3295 4.5114 0.0146 47 1 0.2123 2.3185 0.0025 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17058578_4974302.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:59 Heat of formation + Delta-G solvation = -128.367916 kcal Electronic energy + Delta-G solvation = -29664.566228 eV Core-core repulsion = 25395.223151 eV Total energy + Delta-G solvation = -4269.343076 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -41.98201 -41.57011 -40.34157 -39.54682 -38.12847 -37.26855 -36.93367 -34.63515 -32.83030 -31.26766 -30.56327 -29.24298 -27.97742 -27.44703 -26.84502 -26.60542 -24.10298 -22.79573 -22.42156 -21.67324 -19.68264 -19.52835 -18.83972 -18.50450 -18.24245 -18.07322 -17.56811 -17.50461 -17.00528 -16.62128 -16.22310 -16.12489 -15.99139 -15.62018 -15.48804 -15.43160 -15.24012 -14.58726 -14.41257 -14.27735 -14.18918 -14.10921 -13.66426 -13.55679 -13.44713 -13.26993 -13.08502 -13.00146 -12.54639 -12.39910 -12.31070 -12.04066 -11.83673 -11.52938 -11.46259 -11.33258 -11.29564 -11.23467 -11.01981 -10.79635 -10.13101 -10.10770 -8.83708 -4.94438 0.05133 0.31890 1.32350 1.36834 1.39647 1.57092 1.90584 2.33862 2.51667 2.54210 3.16158 3.40801 3.41872 3.52316 3.59660 3.70330 3.75298 3.83947 3.90775 4.01588 4.03707 4.07987 4.11245 4.18008 4.19909 4.26548 4.44577 4.44754 4.45126 4.54535 4.58880 4.68737 4.71117 4.76761 4.79443 4.85971 4.90033 4.96132 4.99758 5.06248 5.11018 5.17045 5.19408 5.31298 5.40448 5.56199 6.10118 6.35520 6.43905 6.49292 6.88805 7.05250 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.333 6.333 3 C 0.091 3.909 4 C -0.118 4.118 5 C -0.119 4.119 6 C -0.083 4.083 7 O -0.545 6.545 8 Si 0.812 3.188 9 C 0.089 3.911 10 O -0.316 6.316 11 C 0.038 3.962 12 C 0.513 3.487 13 O -0.568 6.568 14 N -0.693 5.693 15 C 0.118 3.882 16 H 0.081 0.919 17 C -0.116 4.116 18 C -0.084 4.084 19 C -0.130 4.130 20 C 0.086 3.914 21 O -0.593 6.593 22 C -0.143 4.143 23 C -0.160 4.160 24 C -0.161 4.161 25 H 0.114 0.886 26 H 0.067 0.933 27 H 0.066 0.934 28 H 0.153 0.847 29 H 0.061 0.939 30 H 0.371 0.629 31 H -0.263 1.263 32 H -0.294 1.294 33 H 0.125 0.875 34 H 0.125 0.875 35 H 0.419 0.581 36 H 0.098 0.902 37 H 0.111 0.889 38 H 0.072 0.928 39 H 0.066 0.934 40 H 0.050 0.950 41 H 0.059 0.941 42 H 0.052 0.948 43 H 0.394 0.606 44 H 0.088 0.912 45 H 0.051 0.949 46 H 0.167 0.833 47 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.742 4.161 -1.037 11.567 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.247 6.247 3 C 0.046 3.954 4 C -0.136 4.136 5 C -0.120 4.120 6 C -0.190 4.190 7 O -0.351 6.351 8 Si 0.713 3.287 9 C 0.044 3.956 10 O -0.230 6.230 11 C -0.040 4.040 12 C 0.299 3.701 13 O -0.446 6.446 14 N -0.350 5.350 15 C 0.013 3.987 16 H 0.099 0.901 17 C -0.153 4.153 18 C -0.084 4.084 19 C -0.187 4.187 20 C 0.009 3.991 21 O -0.401 6.401 22 C -0.181 4.181 23 C -0.178 4.178 24 C -0.180 4.180 25 H 0.133 0.867 26 H 0.086 0.914 27 H 0.085 0.915 28 H 0.170 0.830 29 H 0.079 0.921 30 H 0.219 0.781 31 H -0.189 1.189 32 H -0.222 1.222 33 H 0.142 0.858 34 H 0.142 0.858 35 H 0.260 0.740 36 H 0.116 0.884 37 H 0.129 0.871 38 H 0.091 0.909 39 H 0.085 0.915 40 H 0.069 0.931 41 H 0.078 0.922 42 H 0.070 0.930 43 H 0.243 0.757 44 H 0.106 0.894 45 H 0.070 0.930 46 H 0.184 0.816 47 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -8.900 2.315 -1.759 9.363 hybrid contribution -0.584 2.656 -0.085 2.721 sum -9.484 4.971 -1.844 10.865 Atomic orbital electron populations 1.23359 0.76370 1.05628 1.02369 1.86088 1.23402 1.26268 1.88914 1.18975 0.91922 0.85369 0.99131 1.20184 0.92449 0.96755 1.04232 1.19455 0.96002 0.91009 1.05507 1.25540 0.92887 1.12594 0.87962 1.86660 1.74212 1.42241 1.32011 0.92215 0.76222 0.78984 0.81266 1.18809 0.91774 0.84203 1.00845 1.86083 1.35507 1.11928 1.89469 1.22707 0.92594 0.81870 1.06823 1.20566 0.88391 0.85415 0.75695 1.90771 1.16685 1.87341 1.49774 1.45673 1.11019 1.03771 1.74491 1.21851 0.94936 0.84382 0.97569 0.90096 1.23321 1.01537 0.95755 0.94722 1.21947 0.95841 0.94689 0.95902 1.21650 0.95674 0.99864 1.01526 1.22213 1.00087 0.95880 0.80965 1.86439 1.95758 1.36758 1.21147 1.23514 0.98457 0.99322 0.96856 1.21374 0.92022 1.00057 1.04345 1.21423 1.01615 0.90896 1.04034 0.86726 0.91420 0.91520 0.83018 0.92121 0.78053 1.18862 1.22182 0.85760 0.85789 0.74005 0.88368 0.87070 0.90895 0.91522 0.93054 0.92239 0.92960 0.75661 0.89357 0.92989 0.81557 0.82064 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.02 16 2 O -0.33 -0.77 10.50 -93.34 -0.98 -1.75 16 3 C 0.09 0.27 6.69 22.49 0.15 0.42 16 4 C -0.12 -0.57 8.59 22.36 0.19 -0.38 16 5 C -0.12 -0.79 5.28 -19.78 -0.10 -0.89 16 6 C -0.08 -0.74 2.33 71.24 0.17 -0.57 16 7 O -0.55 -5.91 12.65 -148.98 -1.89 -7.80 16 8 Si 0.81 4.74 30.17 68.60 2.07 6.81 16 9 C 0.09 0.36 6.62 22.49 0.15 0.51 16 10 O -0.32 -1.70 8.56 -74.25 -0.64 -2.34 16 11 C 0.04 -0.12 5.22 71.24 0.37 0.25 16 12 C 0.51 1.52 7.91 87.66 0.69 2.22 16 13 O -0.57 -8.27 16.30 16.01 0.26 -8.01 16 14 N -0.69 2.38 4.39 -439.75 -1.93 0.45 16 15 C 0.12 -0.14 4.12 45.58 0.19 0.05 16 16 H 0.08 0.25 7.83 -2.38 -0.02 0.23 16 17 C -0.12 0.79 6.96 31.12 0.22 1.01 16 18 C -0.08 0.30 1.18 -51.66 -0.06 0.24 16 19 C -0.13 0.57 8.77 71.98 0.63 1.20 16 20 C 0.09 -0.31 6.48 71.98 0.47 0.15 16 21 O -0.59 0.13 12.74 -148.98 -1.90 -1.77 16 22 C -0.14 -0.13 7.04 31.18 0.22 0.08 16 23 C -0.16 0.31 9.03 22.36 0.20 0.51 16 24 C -0.16 0.25 9.03 22.36 0.20 0.46 16 25 H 0.11 -0.95 8.14 -2.38 -0.02 -0.97 16 26 H 0.07 -0.54 7.66 -2.39 -0.02 -0.56 16 27 H 0.07 -0.53 7.66 -2.39 -0.02 -0.55 16 28 H 0.15 0.30 5.13 -2.91 -0.01 0.29 16 29 H 0.06 0.70 7.82 -2.39 -0.02 0.68 16 30 H 0.37 3.19 8.60 -74.05 -0.64 2.55 16 31 H -0.26 -1.99 7.11 99.48 0.71 -1.29 16 32 H -0.29 -3.58 7.11 99.48 0.71 -2.87 16 33 H 0.12 -1.18 7.65 -2.39 -0.02 -1.20 16 34 H 0.12 -1.19 7.67 -2.38 -0.02 -1.21 16 35 H 0.42 -4.34 6.60 -92.71 -0.61 -4.95 16 36 H 0.10 -0.99 8.10 -2.39 -0.02 -1.01 16 37 H 0.11 -0.95 8.10 -2.38 -0.02 -0.96 16 38 H 0.07 -0.50 8.14 -2.39 -0.02 -0.52 16 39 H 0.07 -0.47 4.94 -2.39 -0.01 -0.48 16 40 H 0.05 0.03 7.44 -2.39 -0.02 0.01 16 41 H 0.06 -0.37 8.14 -2.39 -0.02 -0.39 16 42 H 0.05 -0.25 7.98 -2.38 -0.02 -0.26 16 43 H 0.39 -3.15 9.12 -74.06 -0.68 -3.82 16 44 H 0.09 0.11 7.99 -2.39 -0.02 0.09 16 45 H 0.05 0.28 8.10 -2.39 -0.02 0.26 16 46 H 0.17 -1.59 6.29 -2.91 -0.02 -1.61 16 47 H 0.16 -1.21 6.29 -2.91 -0.02 -1.22 16 Total: 0.00 -26.84 379.97 -1.06 -27.90 By element: Atomic # 1 Polarization: -18.91 SS G_CDS: -0.86 Total: -19.76 kcal Atomic # 6 Polarization: 1.47 SS G_CDS: 4.79 Total: 6.27 kcal Atomic # 7 Polarization: 2.38 SS G_CDS: -1.93 Total: 0.45 kcal Atomic # 8 Polarization: -16.52 SS G_CDS: -5.14 Total: -21.66 kcal Atomic # 14 Polarization: 4.74 SS G_CDS: 2.07 Total: 6.81 kcal Total: -26.84 -1.06 -27.90 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17058578_4974302.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -100.472 kcal (2) G-P(sol) polarization free energy of solvation -26.837 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -127.309 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.059 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.896 kcal (6) G-S(sol) free energy of system = (1) + (5) -128.368 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds