Wall clock time and date at job start Tue Mar 9 2021 13:11:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52996 * 112.84979 * 2 1 4 4 O 1.42895 * 109.47347 * 48.80081 * 3 2 1 5 5 C 1.53960 * 113.66700 * 131.24289 * 2 1 3 6 6 C 1.53778 * 87.02020 * 139.93026 * 5 2 1 7 7 H 1.09004 * 113.60998 * 89.22916 * 6 5 2 8 8 N 1.46494 * 113.61798 * 220.04626 * 6 5 2 9 9 C 1.34773 * 120.00256 * 254.14391 * 8 6 5 10 10 O 1.21286 * 119.99990 * 359.97438 * 9 8 6 11 11 C 1.50702 * 120.00297 * 179.97438 * 9 8 6 12 12 N 1.46493 * 109.47232 * 179.97438 * 11 9 8 13 13 C 1.36834 * 125.06814 * 265.02256 * 12 11 9 14 14 C 1.34232 * 109.94463 * 180.02562 * 13 12 11 15 15 C 1.50702 * 126.50124 * 179.97438 * 14 13 12 16 16 O 1.42892 * 109.47242 * 255.02697 * 15 14 13 17 17 Si 1.86298 * 109.46915 * 15.03236 * 15 14 13 18 18 C 1.46489 * 106.99638 * 0.24380 * 14 13 12 19 19 C 1.39597 * 134.03661 * 180.42368 * 18 14 13 20 20 C 1.36658 * 119.76274 * 179.61173 * 19 18 14 21 21 C 1.38782 * 120.53363 * 359.76114 * 20 19 18 22 22 C 1.37789 * 120.66341 * 359.97438 * 21 20 19 23 23 C 1.37700 * 125.06531 * 85.02480 * 12 11 9 24 24 C 1.53781 * 113.61377 * 228.80097 * 2 1 3 25 25 H 1.09001 * 109.47282 * 191.20179 * 1 2 3 26 26 H 1.09000 * 109.47432 * 311.19330 * 1 2 3 27 27 H 1.08997 * 109.47343 * 71.20145 * 1 2 3 28 28 H 1.08997 * 109.47275 * 168.80748 * 3 2 1 29 29 H 1.09002 * 109.46878 * 288.80147 * 3 2 1 30 30 H 0.96700 * 114.00172 * 180.02562 * 4 3 2 31 31 H 1.09004 * 113.61180 * 25.41224 * 5 2 1 32 32 H 1.09001 * 113.66673 * 254.46110 * 5 2 1 33 33 H 0.96996 * 119.99799 * 74.13722 * 8 6 5 34 34 H 1.09003 * 109.47134 * 59.99175 * 11 9 8 35 35 H 1.08997 * 109.46849 * 299.99421 * 11 9 8 36 36 H 1.08008 * 125.02431 * 0.02562 * 13 12 11 37 37 H 1.09000 * 109.46724 * 135.02743 * 15 14 13 38 38 H 0.96703 * 114.00176 * 180.02562 * 16 15 14 39 39 H 1.48506 * 109.99834 * 178.68053 * 17 15 14 40 40 H 1.48502 * 110.00011 * 299.99318 * 17 15 14 41 41 H 1.07999 * 120.11383 * 359.35094 * 19 18 14 42 42 H 1.08004 * 119.73039 * 179.74489 * 20 19 18 43 43 H 1.08003 * 119.66864 * 180.02562 * 21 20 19 44 44 H 1.08006 * 120.11103 * 179.97438 * 22 21 20 45 45 H 1.09004 * 113.61539 * 105.47016 * 24 2 1 46 46 H 1.09001 * 113.68869 * 334.57879 * 24 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.1241 1.4099 0.0000 4 8 1.4913 2.1935 1.0137 5 6 2.1480 -0.9296 1.0603 6 6 3.1923 -1.3137 -0.0012 7 1 4.0717 -0.6696 -0.0015 8 7 3.5310 -2.7389 -0.0025 9 6 4.7136 -3.1510 0.4955 10 8 5.4976 -2.3418 0.9445 11 6 5.0619 -4.6172 0.4947 12 7 6.3901 -4.8040 1.0837 13 6 7.5586 -4.8896 0.3769 14 6 8.5909 -5.0600 1.2177 15 6 10.0427 -5.1991 0.8382 16 8 10.4411 -6.5649 0.9713 17 14 10.2781 -4.6527 -0.9272 18 6 8.0379 -5.0916 2.5739 19 6 8.5952 -5.2317 3.8461 20 6 7.7860 -5.2123 4.9471 21 6 6.4144 -5.0493 4.8113 22 6 5.8440 -4.9038 3.5655 23 6 6.6487 -4.9197 2.4312 24 6 2.1460 -0.9281 -1.0602 25 1 -0.3634 -1.0081 0.1996 26 1 -0.3634 0.6768 0.7733 27 1 -0.3634 0.3311 -0.9728 28 1 3.1942 1.3533 0.1995 29 1 1.9600 1.8733 -0.9729 30 1 1.8191 3.1014 1.0709 31 1 1.4970 -1.7543 1.3507 32 1 2.5686 -0.3998 1.9150 33 1 2.9042 -3.3860 -0.3618 34 1 5.0633 -4.9897 -0.5297 35 1 4.3241 -5.1662 1.0798 36 1 7.6384 -4.8290 -0.6986 37 1 10.6511 -4.5775 1.4951 38 1 11.3664 -6.7288 0.7432 39 1 11.7110 -4.7550 -1.3038 40 1 9.4538 -5.4925 -1.8331 41 1 9.6616 -5.3593 3.9594 42 1 8.2172 -5.3249 5.9309 43 1 5.7880 -5.0356 5.6910 44 1 4.7756 -4.7779 3.4701 45 1 2.5650 -0.3971 -1.9150 46 1 1.4954 -1.7527 -1.3516 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17058578_9818708.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:34 Heat of formation + Delta-G solvation = -18.530470 kcal Electronic energy + Delta-G solvation = -28299.569801 eV Core-core repulsion = 24350.475826 eV Total energy + Delta-G solvation = -3949.093975 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.162 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -42.43769 -41.46205 -39.90945 -37.94906 -37.60573 -37.20262 -34.88521 -34.06187 -31.47275 -30.46184 -30.11335 -28.78471 -27.44517 -26.90289 -25.70519 -23.79713 -23.20231 -22.29507 -21.63613 -20.40861 -19.58646 -18.54193 -18.39407 -18.27621 -18.14115 -17.60379 -17.16875 -16.32289 -16.30159 -16.23936 -15.88254 -15.58910 -15.46412 -14.87564 -14.72548 -14.60052 -14.45008 -14.36351 -14.23244 -13.99207 -13.72745 -13.44670 -13.40688 -13.36957 -13.08493 -12.69307 -12.60531 -12.40693 -12.34752 -11.96017 -11.89432 -11.57883 -11.56249 -11.38181 -11.03085 -10.87944 -10.36708 -10.24788 -10.14493 -8.97325 -8.48167 -4.87636 0.32593 0.84086 1.37906 1.41808 1.49124 1.63471 1.69665 1.99911 2.18439 2.96526 3.13937 3.27118 3.48005 3.48239 3.53677 3.65461 3.72630 3.76441 3.86258 3.89927 3.91147 4.10601 4.11559 4.32432 4.35820 4.39674 4.40899 4.47846 4.49895 4.57498 4.64202 4.73267 4.74139 4.83794 4.85546 4.94772 4.95217 5.03562 5.07762 5.16285 5.29668 5.34525 5.42360 5.69056 5.84888 5.90154 5.94009 6.20002 6.35620 6.41761 6.62987 6.63030 7.04203 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.131 4.131 2 C -0.081 4.081 3 C 0.097 3.903 4 O -0.568 6.568 5 C -0.139 4.139 6 C 0.122 3.878 7 H 0.115 0.885 8 N -0.719 5.719 9 C 0.492 3.508 10 O -0.512 6.512 11 C 0.091 3.909 12 N -0.466 5.466 13 C 0.071 3.929 14 C -0.151 4.151 15 C -0.037 4.037 16 O -0.537 6.537 17 Si 0.678 3.322 18 C -0.086 4.086 19 C -0.065 4.065 20 C -0.146 4.146 21 C -0.097 4.097 22 C -0.127 4.127 23 C 0.110 3.890 24 C -0.134 4.134 25 H 0.054 0.946 26 H 0.069 0.931 27 H 0.055 0.945 28 H 0.049 0.951 29 H 0.050 0.950 30 H 0.382 0.618 31 H 0.087 0.913 32 H 0.076 0.924 33 H 0.402 0.598 34 H 0.122 0.878 35 H 0.118 0.882 36 H 0.169 0.831 37 H 0.072 0.928 38 H 0.375 0.625 39 H -0.259 1.259 40 H -0.255 1.255 41 H 0.121 0.879 42 H 0.123 0.877 43 H 0.125 0.875 44 H 0.115 0.885 45 H 0.078 0.922 46 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.219 1.510 -3.804 5.207 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 C -0.082 4.082 3 C 0.019 3.981 4 O -0.374 6.374 5 C -0.177 4.177 6 C 0.017 3.983 7 H 0.133 0.867 8 N -0.371 5.371 9 C 0.276 3.724 10 O -0.386 6.386 11 C -0.035 4.035 12 N -0.149 5.149 13 C -0.053 4.053 14 C -0.158 4.158 15 C -0.147 4.147 16 O -0.344 6.344 17 Si 0.579 3.421 18 C -0.090 4.090 19 C -0.084 4.084 20 C -0.165 4.165 21 C -0.116 4.116 22 C -0.147 4.147 23 C 0.005 3.995 24 C -0.172 4.172 25 H 0.074 0.926 26 H 0.088 0.912 27 H 0.074 0.926 28 H 0.067 0.933 29 H 0.068 0.932 30 H 0.229 0.771 31 H 0.105 0.895 32 H 0.094 0.906 33 H 0.237 0.763 34 H 0.140 0.860 35 H 0.136 0.864 36 H 0.186 0.814 37 H 0.090 0.910 38 H 0.222 0.778 39 H -0.184 1.184 40 H -0.180 1.180 41 H 0.139 0.861 42 H 0.141 0.859 43 H 0.143 0.857 44 H 0.133 0.867 45 H 0.097 0.903 46 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -3.599 1.287 -4.167 5.654 hybrid contribution 0.626 -0.645 -0.014 0.898 sum -2.973 0.642 -4.181 5.170 Atomic orbital electron populations 1.21592 0.92816 1.01970 1.02401 1.21598 0.96704 0.92881 0.96982 1.21910 0.95266 0.90186 0.90769 1.86455 1.65975 1.27602 1.57381 1.23582 0.97513 0.99044 0.97607 1.22614 0.97226 0.81638 0.96820 0.86713 1.45953 1.18852 1.08902 1.63403 1.21035 0.81937 0.91225 0.78215 1.90806 1.48810 1.54916 1.44068 1.21602 0.84953 0.94566 1.02403 1.43182 1.05137 1.62194 1.04399 1.21500 0.83685 1.03013 0.97141 1.19414 0.92806 1.12079 0.91493 1.24011 0.93434 0.85993 1.11297 1.86642 1.32176 1.25519 1.90013 0.95102 0.81382 0.90470 0.75096 1.18941 0.91614 1.05410 0.93059 1.20267 0.99690 0.98105 0.90328 1.20654 0.93622 1.03691 0.98512 1.20814 0.95158 0.99529 0.96134 1.19954 0.98452 1.06054 0.90256 1.18147 0.94523 1.03293 0.83503 1.23448 0.97344 0.99435 0.97005 0.92644 0.91240 0.92568 0.93265 0.93175 0.77076 0.89473 0.90564 0.76318 0.85993 0.86428 0.81436 0.91017 0.77767 1.18418 1.17963 0.86105 0.85948 0.85726 0.86722 0.90346 0.88797 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 0.10 9.08 37.16 0.34 0.44 16 2 C -0.08 0.10 1.19 -153.60 -0.18 -0.08 16 3 C 0.10 -0.10 6.39 37.16 0.24 0.14 16 4 O -0.57 -0.08 12.64 -35.23 -0.45 -0.52 16 5 C -0.14 0.09 7.01 -25.83 -0.18 -0.09 16 6 C 0.12 -0.16 3.86 -67.12 -0.26 -0.42 16 7 H 0.12 0.07 7.02 -51.93 -0.36 -0.30 16 8 N -0.72 1.74 5.36 -53.02 -0.28 1.46 16 9 C 0.49 0.14 7.90 -10.99 -0.09 0.05 16 10 O -0.51 -2.63 16.04 5.55 0.09 -2.54 16 11 C 0.09 -0.16 6.48 -5.20 -0.03 -0.19 16 12 N -0.47 -1.05 2.27 -115.71 -0.26 -1.32 16 13 C 0.07 0.17 9.89 -16.73 -0.17 0.00 16 14 C -0.15 -0.58 5.61 -102.71 -0.58 -1.15 16 15 C -0.04 -0.07 3.05 36.01 0.11 0.04 16 16 O -0.54 -1.51 12.86 -35.23 -0.45 -1.96 16 17 Si 0.68 0.09 30.79 -169.99 -5.23 -5.14 16 18 C -0.09 -0.44 6.35 -105.14 -0.67 -1.11 16 19 C -0.07 -0.27 10.05 -39.65 -0.40 -0.67 16 20 C -0.15 -0.45 9.97 -39.95 -0.40 -0.85 16 21 C -0.10 -0.27 10.01 -39.54 -0.40 -0.66 16 22 C -0.13 -0.41 10.00 -39.43 -0.39 -0.80 16 23 C 0.11 0.47 6.80 -83.99 -0.57 -0.10 16 24 C -0.13 0.38 6.98 -25.92 -0.18 0.20 16 25 H 0.05 -0.08 7.95 -51.93 -0.41 -0.49 16 26 H 0.07 0.06 7.32 -51.93 -0.38 -0.32 16 27 H 0.06 -0.06 8.14 -51.93 -0.42 -0.49 16 28 H 0.05 -0.06 7.35 -51.93 -0.38 -0.44 16 29 H 0.05 -0.10 8.14 -51.93 -0.42 -0.52 16 30 H 0.38 -1.44 9.12 45.56 0.42 -1.03 16 31 H 0.09 -0.10 7.97 -51.93 -0.41 -0.51 16 32 H 0.08 0.10 8.10 -51.93 -0.42 -0.32 16 33 H 0.40 -2.21 8.71 -40.82 -0.36 -2.57 16 34 H 0.12 -0.60 8.12 -51.93 -0.42 -1.02 16 35 H 0.12 -0.45 8.14 -51.93 -0.42 -0.87 16 36 H 0.17 -0.05 6.30 -52.48 -0.33 -0.39 16 37 H 0.07 0.06 7.96 -51.93 -0.41 -0.35 16 38 H 0.38 -0.53 8.74 45.56 0.40 -0.13 16 39 H -0.26 -0.50 7.11 56.52 0.40 -0.10 16 40 H -0.26 -0.56 7.04 56.52 0.40 -0.16 16 41 H 0.12 0.35 8.06 -52.49 -0.42 -0.08 16 42 H 0.12 0.12 8.06 -52.48 -0.42 -0.30 16 43 H 0.12 0.06 8.06 -52.48 -0.42 -0.36 16 44 H 0.11 0.14 8.06 -52.48 -0.42 -0.28 16 45 H 0.08 -0.24 8.10 -51.93 -0.42 -0.66 16 46 H 0.09 -0.38 8.07 -51.93 -0.42 -0.80 16 LS Contribution 382.23 15.07 5.76 5.76 Total: 0.00 -11.29 382.23 -10.72 -22.01 By element: Atomic # 1 Polarization: -6.40 SS G_CDS: -6.08 Total: -12.49 kcal Atomic # 6 Polarization: -1.45 SS G_CDS: -3.81 Total: -5.26 kcal Atomic # 7 Polarization: 0.69 SS G_CDS: -0.55 Total: 0.14 kcal Atomic # 8 Polarization: -4.21 SS G_CDS: -0.81 Total: -5.02 kcal Atomic # 14 Polarization: 0.09 SS G_CDS: -5.23 Total: -5.14 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -11.29 -10.72 -22.01 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17058578_9818708.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 3.475 kcal (2) G-P(sol) polarization free energy of solvation -11.286 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.811 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.719 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.006 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.530 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds