Wall clock time and date at job start Tue Mar 9 2021 14:13:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.37643 * 125.67356 * 2 1 4 4 C 1.46676 * 126.22409 * 0.02562 * 3 2 1 5 5 O 1.21695 * 119.99871 * 4.64813 * 4 3 2 6 6 N 1.34780 * 119.99963 * 184.65449 * 4 3 2 7 7 C 1.46496 * 120.00128 * 175.06181 * 6 4 3 8 8 C 1.53002 * 109.47197 * 180.27251 * 7 6 4 9 9 C 1.52998 * 109.47045 * 180.02562 * 8 7 6 10 10 S 1.81393 * 109.47072 * 180.02562 * 9 8 7 11 11 C 1.81402 * 103.00212 * 184.99557 * 10 9 8 12 12 Si 1.86292 * 109.47361 * 184.99577 * 11 10 9 13 13 C 1.86302 * 109.47242 * 55.04572 * 12 11 10 14 14 C 1.86299 * 109.47423 * 175.04821 * 12 11 10 15 15 C 1.86300 * 109.47323 * 295.04698 * 12 11 10 16 16 C 1.37887 * 107.55053 * 179.75653 * 3 2 1 17 17 C 1.39882 * 107.09017 * 0.24141 * 16 3 2 18 18 Br 1.89101 * 126.07218 * 180.02562 * 17 16 3 19 19 C 1.35499 * 107.85181 * 0.02562 * 17 16 3 20 20 C 1.50706 * 125.56937 * 180.02562 * 19 17 16 21 21 O 1.42897 * 109.47081 * 125.15664 * 20 19 17 22 22 Si 1.86309 * 109.46871 * 245.15465 * 20 19 17 23 23 H 1.48494 * 109.47024 * 64.87722 * 22 20 19 24 24 H 1.48500 * 109.46946 * 184.87629 * 22 20 19 25 25 H 1.48496 * 109.47018 * 304.87534 * 22 20 19 26 26 H 1.09009 * 109.47124 * 94.42055 * 1 2 3 27 27 H 1.09002 * 109.47115 * 214.41263 * 1 2 3 28 28 H 1.09000 * 109.47717 * 334.41675 * 1 2 3 29 29 H 0.97008 * 119.99695 * 355.33835 * 6 4 3 30 30 H 1.09003 * 109.47187 * 300.27584 * 7 6 4 31 31 H 1.09006 * 109.46904 * 60.27466 * 7 6 4 32 32 H 1.08995 * 109.47493 * 300.00533 * 8 7 6 33 33 H 1.09001 * 109.46777 * 60.00674 * 8 7 6 34 34 H 1.09003 * 109.47118 * 300.00197 * 9 8 7 35 35 H 1.08998 * 109.47282 * 59.99913 * 9 8 7 36 36 H 1.09005 * 109.47190 * 304.99643 * 11 10 9 37 37 H 1.09000 * 109.46576 * 64.99558 * 11 10 9 38 38 H 1.08999 * 109.46925 * 60.00050 * 13 12 11 39 39 H 1.09002 * 109.47410 * 179.97438 * 13 12 11 40 40 H 1.08998 * 109.47357 * 300.00372 * 13 12 11 41 41 H 1.09002 * 109.46864 * 59.99666 * 14 12 11 42 42 H 1.08994 * 109.47509 * 180.02562 * 14 12 11 43 43 H 1.08999 * 109.46907 * 300.00051 * 14 12 11 44 44 H 1.09005 * 109.46898 * 65.00040 * 15 12 11 45 45 H 1.08998 * 109.47422 * 185.00394 * 15 12 11 46 46 H 1.08997 * 109.46938 * 305.00479 * 15 12 11 47 47 H 1.07999 * 126.45730 * 180.27227 * 16 3 2 48 48 H 1.08999 * 109.47040 * 5.15395 * 20 19 17 49 49 H 0.96705 * 113.99938 * 180.02562 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2676 1.1181 0.0000 4 6 1.8119 2.5123 0.0005 5 8 0.6244 2.7642 0.0864 6 7 2.7083 3.5144 -0.0943 7 6 2.2482 4.9009 -0.2028 8 6 3.4573 5.8332 -0.3028 9 6 2.9767 7.2814 -0.4155 10 16 4.4101 8.3865 -0.5349 11 6 3.6570 10.0365 -0.5050 12 14 4.9749 11.3257 -0.7721 13 6 5.8926 10.9578 -2.3512 14 6 4.1831 13.0079 -0.8916 15 6 6.1672 11.3009 0.6592 16 6 3.5781 0.6892 0.0056 17 6 3.5529 -0.7093 0.0033 18 35 5.0610 -1.8501 0.0095 19 6 2.2559 -1.1014 -0.0040 20 6 1.7715 -2.5285 -0.0082 21 8 0.8779 -2.7314 1.0883 22 14 0.8815 -2.8775 -1.6073 23 1 1.8394 -2.7818 -2.7379 24 1 0.3025 -4.2443 -1.5634 25 1 -0.2067 -1.8847 -1.7950 26 1 -0.3634 -0.0792 -1.0247 27 1 -0.3633 -0.8478 0.5808 28 1 -0.3634 0.9269 0.4437 29 1 3.6581 3.3170 -0.0947 30 1 1.6304 5.0101 -1.0942 31 1 1.6621 5.1594 0.6793 32 1 4.0750 5.7240 0.5885 33 1 4.0432 5.5748 -1.1849 34 1 2.3587 7.3908 -1.3067 35 1 2.3909 7.5395 0.4667 36 1 2.9111 10.1099 -1.2966 37 1 3.1790 10.2002 0.4609 38 1 5.1950 10.9724 -3.1886 39 1 6.6634 11.7124 -2.5077 40 1 6.3559 9.9737 -2.2813 41 1 3.6462 13.2231 0.0323 42 1 4.9542 13.7621 -1.0483 43 1 3.4856 13.0224 -1.7290 44 1 6.6955 10.3476 0.6755 45 1 6.8859 12.1127 0.5475 46 1 5.6177 11.4278 1.5919 47 1 4.4582 1.3152 0.0112 48 1 2.6234 -3.2016 0.0880 49 1 0.5264 -3.6303 1.1481 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17310320_5000100.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:13:40 Heat of formation + Delta-G solvation = -73.999716 kcal Electronic energy + Delta-G solvation = -26694.324485 eV Core-core repulsion = 22759.775699 eV Total energy + Delta-G solvation = -3934.548786 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 422.061 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -42.76280 -40.30235 -37.87938 -36.95854 -34.56926 -33.79924 -32.10532 -30.91875 -30.09879 -28.97889 -28.49531 -28.40059 -28.07753 -27.29237 -26.08059 -23.12616 -22.85851 -21.45701 -20.31631 -18.84148 -18.67328 -17.49106 -17.21908 -17.10221 -16.71809 -16.56426 -16.03188 -15.55861 -15.36593 -14.96087 -14.90206 -14.83019 -14.62231 -14.46466 -14.31530 -14.28595 -14.23047 -13.97081 -13.84296 -13.79376 -13.62142 -13.38762 -13.24517 -13.19516 -13.12162 -13.08646 -12.81070 -12.60779 -12.36289 -12.18295 -12.02246 -11.78149 -11.38886 -11.24003 -10.99667 -10.88856 -10.85074 -10.73207 -10.71270 -10.24113 -9.70769 -9.17765 -8.58901 0.20519 0.56936 0.71797 0.84630 1.15526 1.27544 1.37718 1.42670 1.53051 1.69576 1.76822 1.80779 1.95126 2.25460 2.30506 2.52479 3.03410 3.52325 3.58760 3.72771 3.76525 3.84649 3.92540 4.03752 4.16790 4.27664 4.28768 4.34087 4.43012 4.48277 4.57318 4.62742 4.63786 4.67816 4.70225 4.75789 4.76221 4.77860 4.80609 4.85230 4.87418 4.95885 5.24672 5.35342 5.39294 5.54352 5.58491 5.69062 5.90255 6.32472 6.35514 7.07334 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.048 3.952 2 N -0.384 5.384 3 C -0.036 4.036 4 C 0.594 3.406 5 O -0.541 6.541 6 N -0.717 5.717 7 C 0.127 3.873 8 C -0.117 4.117 9 C -0.092 4.092 10 S -0.237 6.237 11 C -0.382 4.382 12 Si 1.020 2.980 13 C -0.445 4.445 14 C -0.442 4.442 15 C -0.446 4.446 16 C -0.109 4.109 17 C -0.161 4.161 18 Br -0.020 7.020 19 C 0.091 3.909 20 C -0.062 4.062 21 O -0.544 6.544 22 Si 0.931 3.069 23 H -0.240 1.240 24 H -0.239 1.239 25 H -0.241 1.241 26 H 0.081 0.919 27 H 0.100 0.900 28 H 0.113 0.887 29 H 0.406 0.594 30 H 0.073 0.927 31 H 0.074 0.926 32 H 0.082 0.918 33 H 0.081 0.919 34 H 0.084 0.916 35 H 0.083 0.917 36 H 0.095 0.905 37 H 0.094 0.906 38 H 0.068 0.932 39 H 0.069 0.931 40 H 0.076 0.924 41 H 0.070 0.930 42 H 0.074 0.926 43 H 0.070 0.930 44 H 0.074 0.926 45 H 0.070 0.930 46 H 0.068 0.932 47 H 0.157 0.843 48 H 0.098 0.902 49 H 0.387 0.613 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.050 0.295 -1.080 1.120 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 N -0.056 5.056 3 C -0.151 4.151 4 C 0.381 3.619 5 O -0.420 6.420 6 N -0.369 5.369 7 C 0.002 3.998 8 C -0.156 4.156 9 C -0.241 4.241 10 S -0.011 6.011 11 C -0.575 4.575 12 Si 1.215 2.785 13 C -0.553 4.553 14 C -0.552 4.552 15 C -0.554 4.554 16 C -0.136 4.136 17 C -0.246 4.246 18 Br 0.064 6.936 19 C -0.030 4.030 20 C -0.172 4.172 21 O -0.350 6.350 22 Si 0.749 3.251 23 H -0.162 1.162 24 H -0.162 1.162 25 H -0.164 1.164 26 H 0.099 0.901 27 H 0.119 0.881 28 H 0.131 0.869 29 H 0.241 0.759 30 H 0.091 0.909 31 H 0.092 0.908 32 H 0.101 0.899 33 H 0.100 0.900 34 H 0.102 0.898 35 H 0.102 0.898 36 H 0.114 0.886 37 H 0.113 0.887 38 H 0.087 0.913 39 H 0.088 0.912 40 H 0.095 0.905 41 H 0.089 0.911 42 H 0.093 0.907 43 H 0.089 0.911 44 H 0.093 0.907 45 H 0.089 0.911 46 H 0.087 0.913 47 H 0.175 0.825 48 H 0.116 0.884 49 H 0.236 0.764 Dipole moment (debyes) X Y Z Total from point charges 0.052 0.277 -1.763 1.785 hybrid contribution -1.173 -0.085 0.498 1.278 sum -1.122 0.192 -1.264 1.701 Atomic orbital electron populations 1.22751 0.74893 1.07175 1.04434 1.43716 1.07287 1.03784 1.50788 1.19963 0.89789 0.87761 1.17603 1.16804 0.85576 0.83205 0.76272 1.90806 1.16160 1.84631 1.50364 1.45568 1.10019 1.06164 1.75199 1.21366 0.96476 0.79027 1.02937 1.21522 0.97772 0.91936 1.04385 1.23329 0.98981 0.96444 1.05323 1.86805 1.15502 1.01182 1.97583 1.28057 1.17010 1.04709 1.07748 0.78806 0.65472 0.65881 0.68307 1.26071 1.08296 1.05517 1.15411 1.26047 1.07505 1.16951 1.04656 1.26080 1.10990 1.04795 1.13550 1.21190 0.95144 0.92940 1.04371 1.20690 0.90925 0.94387 1.18624 1.96664 1.35710 1.62965 1.98214 1.19503 0.89024 0.87862 1.06655 1.24371 0.98595 0.92782 1.01459 1.86459 1.63581 1.36132 1.48851 0.85987 0.81056 0.82018 0.76011 1.16240 1.16220 1.16446 0.90065 0.88123 0.86868 0.75900 0.90910 0.90794 0.89912 0.89989 0.89777 0.89786 0.88647 0.88723 0.91259 0.91198 0.90523 0.91107 0.90656 0.91111 0.90683 0.91128 0.91271 0.82521 0.88429 0.76399 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.07 9.03 59.84 0.54 0.61 16 2 N -0.38 -1.00 3.13 -115.58 -0.36 -1.36 16 3 C -0.04 -0.09 6.89 -81.98 -0.56 -0.65 16 4 C 0.59 1.55 7.77 -12.85 -0.10 1.45 16 5 O -0.54 -2.95 14.57 5.19 0.08 -2.88 16 6 N -0.72 0.33 5.54 -61.62 -0.34 -0.01 16 7 C 0.13 -0.13 5.68 -4.04 -0.02 -0.15 16 8 C -0.12 0.26 5.34 -26.73 -0.14 0.12 16 9 C -0.09 0.13 5.94 37.16 0.22 0.35 16 10 S -0.24 0.02 20.84 -107.50 -2.24 -2.22 16 11 C -0.38 0.62 5.14 101.05 0.52 1.14 16 12 Si 1.02 -2.60 12.30 -169.99 -2.09 -4.69 16 13 C -0.44 0.50 8.65 101.05 0.87 1.38 16 14 C -0.44 0.91 8.65 101.05 0.87 1.79 16 15 C -0.45 0.52 8.65 101.05 0.87 1.39 16 16 C -0.11 -0.12 10.34 -39.09 -0.40 -0.53 16 17 C -0.16 -0.33 6.53 -39.94 -0.26 -0.60 16 18 Br -0.02 -0.03 33.06 -68.01 -2.25 -2.27 16 19 C 0.09 0.19 5.13 -81.90 -0.42 -0.23 16 20 C -0.06 0.02 2.78 36.01 0.10 0.12 16 21 O -0.54 0.44 11.26 -35.23 -0.40 0.05 16 22 Si 0.93 -0.70 27.07 -169.99 -4.60 -5.31 16 23 H -0.24 -0.14 7.11 56.52 0.40 0.26 16 24 H -0.24 0.34 7.11 56.52 0.40 0.74 16 25 H -0.24 0.03 5.52 56.52 0.31 0.34 16 26 H 0.08 0.06 6.81 -51.92 -0.35 -0.30 16 27 H 0.10 0.03 6.40 -51.93 -0.33 -0.30 16 28 H 0.11 0.28 5.99 -51.93 -0.31 -0.03 16 29 H 0.41 -1.14 7.37 -40.82 -0.30 -1.44 16 30 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 31 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 32 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 33 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 34 H 0.08 -0.14 8.14 -51.92 -0.42 -0.57 16 35 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 36 H 0.09 -0.20 7.96 -51.92 -0.41 -0.62 16 37 H 0.09 -0.19 7.96 -51.92 -0.41 -0.60 16 38 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 39 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 40 H 0.08 -0.02 7.96 -51.93 -0.41 -0.44 16 41 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 42 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 43 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 44 H 0.07 -0.03 7.96 -51.93 -0.41 -0.44 16 45 H 0.07 -0.09 7.96 -51.93 -0.41 -0.51 16 46 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 47 H 0.16 -0.26 7.45 -52.49 -0.39 -0.65 16 48 H 0.10 -0.12 6.96 -51.93 -0.36 -0.49 16 49 H 0.39 -2.08 8.74 45.56 0.40 -1.68 16 LS Contribution 430.19 15.07 6.48 6.48 Total: 0.00 -7.35 430.19 -11.25 -18.60 By element: Atomic # 1 Polarization: -4.95 SS G_CDS: -7.62 Total: -12.57 kcal Atomic # 6 Polarization: 4.09 SS G_CDS: 2.09 Total: 6.18 kcal Atomic # 7 Polarization: -0.67 SS G_CDS: -0.70 Total: -1.37 kcal Atomic # 8 Polarization: -2.51 SS G_CDS: -0.32 Total: -2.83 kcal Atomic # 14 Polarization: -3.30 SS G_CDS: -6.69 Total: -9.99 kcal Atomic # 16 Polarization: 0.02 SS G_CDS: -2.24 Total: -2.22 kcal Atomic # 35 Polarization: -0.03 SS G_CDS: -2.25 Total: -2.27 kcal Total LS contribution 6.48 Total: 6.48 kcal Total: -7.35 -11.25 -18.60 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17310320_5000100.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.398 kcal (2) G-P(sol) polarization free energy of solvation -7.347 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.745 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.255 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.602 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.000 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds