Wall clock time and date at job start Tue Mar 9 2021 14:48:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86302 * 1 3 3 C 1.86300 * 109.47143 * 2 1 4 4 C 1.86302 * 109.47154 * 240.00090 * 2 1 3 5 5 C 1.86303 * 109.47288 * 120.00222 * 2 1 3 6 6 S 1.81399 * 109.46973 * 67.30012 * 5 2 1 7 7 C 1.81400 * 103.00131 * 78.44801 * 6 5 2 8 8 C 1.52996 * 109.47182 * 174.34652 * 7 6 5 9 9 N 1.46506 * 109.47085 * 179.97438 * 8 7 6 10 10 C 1.34773 * 119.99938 * 179.97438 * 9 8 7 11 11 O 1.21572 * 119.99936 * 0.02562 * 10 9 8 12 12 C 1.47693 * 120.00028 * 180.02562 * 10 9 8 13 13 C 1.39616 * 120.15517 * 359.97438 * 12 10 9 14 14 C 1.38110 * 119.84976 * 180.02562 * 13 12 10 15 15 F 1.35102 * 119.91235 * 180.02562 * 14 13 12 16 16 C 1.38609 * 120.16983 * 0.02562 * 14 13 12 17 17 C 1.50701 * 119.84268 * 179.97438 * 16 14 13 18 18 O 1.42902 * 109.47393 * 285.00141 * 17 16 14 19 19 Si 1.86300 * 109.46952 * 164.99837 * 17 16 14 20 20 H 1.48508 * 109.46961 * 60.00198 * 19 17 16 21 21 H 1.48496 * 109.47071 * 179.97438 * 19 17 16 22 22 H 1.48499 * 109.47356 * 300.00142 * 19 17 16 23 23 C 1.38232 * 120.31278 * 0.02562 * 16 14 13 24 24 C 1.38269 * 120.14476 * 359.97438 * 23 16 14 25 25 F 1.35102 * 120.08070 * 179.97438 * 24 23 16 26 26 H 1.08993 * 109.46875 * 299.99619 * 1 2 3 27 27 H 1.08996 * 109.46886 * 59.99754 * 1 2 3 28 28 H 1.08999 * 109.46869 * 179.97438 * 1 2 3 29 29 H 1.09001 * 109.46835 * 180.02562 * 3 2 1 30 30 H 1.08994 * 109.46935 * 300.00037 * 3 2 1 31 31 H 1.08993 * 109.46924 * 60.00410 * 3 2 1 32 32 H 1.09006 * 109.47118 * 307.36443 * 4 2 1 33 33 H 1.08998 * 109.47236 * 67.35945 * 4 2 1 34 34 H 1.08998 * 109.47323 * 187.36522 * 4 2 1 35 35 H 1.08997 * 109.46822 * 307.30255 * 5 2 1 36 36 H 1.08996 * 109.47184 * 187.29944 * 5 2 1 37 37 H 1.08993 * 109.47266 * 54.34352 * 7 6 5 38 38 H 1.09001 * 109.46999 * 294.34455 * 7 6 5 39 39 H 1.09000 * 109.47033 * 60.00032 * 8 7 6 40 40 H 1.09001 * 109.46993 * 299.99807 * 8 7 6 41 41 H 0.96996 * 119.99895 * 0.02562 * 9 8 7 42 42 H 1.07998 * 120.07161 * 0.30300 * 13 12 10 43 43 H 1.09002 * 109.47175 * 45.00041 * 17 16 14 44 44 H 0.96700 * 113.99343 * 299.99787 * 18 17 16 45 45 H 1.08001 * 119.92608 * 179.97438 * 23 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7565 0.0000 4 6 2.4840 -0.8782 -1.5212 5 6 2.4841 -0.8783 1.5211 6 16 2.0634 -2.6397 1.4163 7 6 3.3207 -3.2929 0.2837 8 6 3.1883 -4.8147 0.1974 9 7 4.2034 -5.3422 -0.7178 10 6 4.2775 -6.6676 -0.9504 11 8 3.5017 -7.4255 -0.4010 12 6 5.3012 -7.1995 -1.8726 13 6 6.1934 -6.3320 -2.5057 14 6 7.1478 -6.8361 -3.3673 15 9 8.0122 -5.9979 -3.9801 16 6 7.2212 -8.1997 -3.6048 17 6 8.2652 -8.7418 -4.5468 18 8 7.8824 -8.4610 -5.8947 19 14 8.4146 -10.5842 -4.3145 20 1 7.1070 -11.2270 -4.6019 21 1 9.4429 -11.1184 -5.2432 22 1 8.8124 -10.8759 -2.9139 23 6 6.3406 -9.0647 -2.9826 24 6 5.3799 -8.5741 -2.1175 25 9 4.5196 -9.4205 -1.5105 26 1 -0.3633 0.5137 0.8900 27 1 -0.3633 0.5139 -0.8899 28 1 -0.3633 -1.0277 -0.0005 29 1 3.5740 1.7564 -0.0005 30 1 2.1207 2.2702 -0.8899 31 1 2.1208 2.2702 0.8900 32 1 2.0171 -1.8608 -1.5895 33 1 2.2322 -0.2940 -2.4062 34 1 3.5660 -0.9937 -1.4578 35 1 2.0180 -0.4455 2.4062 36 1 3.5662 -0.7666 1.5888 37 1 4.3128 -3.0350 0.6543 38 1 3.1786 -2.8592 -0.7062 39 1 2.1962 -5.0726 -0.1732 40 1 3.3304 -5.2485 1.1873 41 1 4.8226 -4.7376 -1.1558 42 1 6.1402 -5.2697 -2.3185 43 1 9.2249 -8.2700 -4.3360 44 1 7.0357 -8.8508 -6.1523 45 1 6.4031 -10.1260 -3.1725 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17310322_12360598.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:48:29 Heat of formation + Delta-G solvation = -171.247417 kcal Electronic energy + Delta-G solvation = -27576.874464 eV Core-core repulsion = 23287.293761 eV Total energy + Delta-G solvation = -4289.580703 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 363.105 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -50.11920 -50.02007 -41.34171 -39.96330 -37.76350 -36.58354 -33.77161 -31.80481 -31.44719 -30.18545 -28.92364 -28.69271 -28.48766 -27.83963 -24.77544 -24.50677 -23.32994 -21.94390 -19.86432 -18.90699 -18.68627 -18.01545 -17.46580 -17.32657 -16.98065 -16.82409 -16.73589 -16.48375 -16.46400 -16.00086 -15.66632 -15.54094 -15.34487 -15.05010 -14.84251 -14.68528 -14.61433 -14.33878 -14.13376 -13.96164 -13.81214 -13.73795 -13.41755 -13.33154 -13.28517 -13.21449 -13.05600 -13.00325 -12.66702 -12.44181 -12.33170 -11.98955 -11.84876 -11.23420 -11.09783 -10.96880 -10.76159 -10.71570 -10.67973 -10.31496 -9.85860 -8.55142 -0.87523 -0.39837 0.36609 0.87748 1.23128 1.33815 1.36282 1.39660 1.41572 1.70294 1.74163 1.86914 1.95432 2.21933 2.44920 2.72350 2.77269 2.99861 3.12511 3.34380 3.42584 3.53250 3.65260 3.69885 4.01278 4.08943 4.20069 4.22411 4.27131 4.43292 4.50197 4.54820 4.57922 4.58166 4.59422 4.60352 4.64817 4.66625 4.73886 4.74990 4.79395 5.08930 5.30673 5.31175 5.38256 5.53092 6.16170 6.29806 6.93776 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.445 4.445 2 Si 1.005 2.995 3 C -0.447 4.447 4 C -0.454 4.454 5 C -0.384 4.384 6 S -0.214 6.214 7 C -0.129 4.129 8 C 0.136 3.864 9 N -0.722 5.722 10 C 0.561 3.439 11 O -0.509 6.509 12 C -0.140 4.140 13 C -0.094 4.094 14 C 0.114 3.886 15 F -0.119 7.119 16 C -0.100 4.100 17 C -0.085 4.085 18 O -0.528 6.528 19 Si 0.948 3.052 20 H -0.246 1.246 21 H -0.244 1.244 22 H -0.243 1.243 23 C -0.144 4.144 24 C 0.161 3.839 25 F -0.104 7.104 26 H 0.067 0.933 27 H 0.069 0.931 28 H 0.077 0.923 29 H 0.068 0.932 30 H 0.072 0.928 31 H 0.070 0.930 32 H 0.077 0.923 33 H 0.075 0.925 34 H 0.066 0.934 35 H 0.118 0.882 36 H 0.096 0.904 37 H 0.089 0.911 38 H 0.105 0.895 39 H 0.083 0.917 40 H 0.083 0.917 41 H 0.401 0.599 42 H 0.152 0.848 43 H 0.127 0.873 44 H 0.379 0.621 45 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.462 3.490 -1.823 4.644 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.553 4.553 2 Si 1.201 2.799 3 C -0.556 4.556 4 C -0.562 4.562 5 C -0.578 4.578 6 S 0.012 5.988 7 C -0.278 4.278 8 C 0.012 3.988 9 N -0.377 5.377 10 C 0.346 3.654 11 O -0.384 6.384 12 C -0.145 4.145 13 C -0.113 4.113 14 C 0.094 3.906 15 F -0.097 7.097 16 C -0.101 4.101 17 C -0.195 4.195 18 O -0.333 6.333 19 Si 0.768 3.232 20 H -0.170 1.170 21 H -0.167 1.167 22 H -0.166 1.166 23 C -0.163 4.163 24 C 0.140 3.860 25 F -0.082 7.082 26 H 0.086 0.914 27 H 0.088 0.912 28 H 0.096 0.904 29 H 0.087 0.913 30 H 0.091 0.909 31 H 0.089 0.911 32 H 0.096 0.904 33 H 0.094 0.906 34 H 0.086 0.914 35 H 0.137 0.863 36 H 0.114 0.886 37 H 0.108 0.892 38 H 0.123 0.877 39 H 0.101 0.899 40 H 0.101 0.899 41 H 0.236 0.764 42 H 0.169 0.831 43 H 0.145 0.855 44 H 0.226 0.774 45 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges 1.712 1.812 -0.730 2.598 hybrid contribution 0.838 1.352 -0.642 1.715 sum 2.550 3.165 -1.372 4.289 Atomic orbital electron populations 1.26077 1.19870 1.05083 1.04320 0.79186 0.68347 0.66980 0.65407 1.26095 1.06128 1.18551 1.04781 1.26347 1.05729 1.08469 1.15611 1.28109 1.09542 0.99254 1.20911 1.86895 1.41497 1.08461 1.61994 1.23961 1.01712 0.98465 1.03630 1.21035 0.92476 0.90546 0.94758 1.45818 1.36609 1.07198 1.48033 1.17788 0.83689 0.82370 0.81509 1.90914 1.41243 1.57044 1.49243 1.19841 0.99805 0.92527 1.02284 1.21182 0.93661 1.00807 0.95688 1.17175 0.90866 0.87142 0.95406 1.91590 1.67189 1.70136 1.80825 1.20475 0.98344 0.92264 0.99061 1.25083 0.98371 1.13325 0.82769 1.86607 1.43243 1.78508 1.24937 0.85692 0.82069 0.73126 0.82269 1.16974 1.16695 1.16588 1.21051 0.95452 1.01597 0.98173 1.17474 0.89135 0.86361 0.92991 1.91660 1.66964 1.69178 1.80389 0.91353 0.91201 0.90420 0.91283 0.90883 0.91068 0.90426 0.90611 0.91447 0.86336 0.88553 0.89219 0.87694 0.89868 0.89892 0.76357 0.83082 0.85516 0.77379 0.82781 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.77 8.65 101.05 0.87 1.64 16 2 Si 1.00 -3.66 12.15 -169.99 -2.06 -5.72 16 3 C -0.45 1.20 8.65 101.05 0.87 2.07 16 4 C -0.45 1.46 7.09 101.05 0.72 2.18 16 5 C -0.38 0.98 5.18 101.05 0.52 1.50 16 6 S -0.21 0.09 20.94 -107.50 -2.25 -2.16 16 7 C -0.13 0.32 5.73 37.16 0.21 0.53 16 8 C 0.14 -0.09 5.68 -4.04 -0.02 -0.11 16 9 N -0.72 0.93 5.51 -61.30 -0.34 0.59 16 10 C 0.56 1.07 7.77 -12.40 -0.10 0.98 16 11 O -0.51 -3.12 15.34 5.30 0.08 -3.04 16 12 C -0.14 -0.05 5.88 -104.92 -0.62 -0.66 16 13 C -0.09 0.18 9.52 -39.11 -0.37 -0.19 16 14 C 0.11 -0.10 7.23 -39.49 -0.29 -0.38 16 15 F -0.12 -0.04 16.73 2.25 0.04 0.00 16 16 C -0.10 0.12 5.27 -104.49 -0.55 -0.43 16 17 C -0.09 0.16 2.44 36.01 0.09 0.25 16 18 O -0.53 0.56 12.88 -35.23 -0.45 0.10 16 19 Si 0.95 -2.08 25.48 -169.99 -4.33 -6.41 16 20 H -0.25 0.59 6.72 56.52 0.38 0.97 16 21 H -0.24 0.17 7.11 56.52 0.40 0.58 16 22 H -0.24 0.36 7.11 56.52 0.40 0.77 16 23 C -0.14 0.13 8.62 -39.57 -0.34 -0.21 16 24 C 0.16 0.19 7.28 -38.97 -0.28 -0.09 16 25 F -0.10 -0.39 15.55 2.25 0.04 -0.36 16 26 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 27 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 28 H 0.08 -0.08 7.96 -51.93 -0.41 -0.49 16 29 H 0.07 -0.19 7.96 -51.93 -0.41 -0.61 16 30 H 0.07 -0.18 7.96 -51.93 -0.41 -0.59 16 31 H 0.07 -0.18 7.96 -51.93 -0.41 -0.59 16 32 H 0.08 -0.22 6.60 -51.93 -0.34 -0.56 16 33 H 0.07 -0.22 7.96 -51.93 -0.41 -0.64 16 34 H 0.07 -0.26 7.56 -51.93 -0.39 -0.66 16 35 H 0.12 -0.32 7.96 -51.93 -0.41 -0.73 16 36 H 0.10 -0.33 7.96 -51.93 -0.41 -0.74 16 37 H 0.09 -0.32 8.14 -51.93 -0.42 -0.74 16 38 H 0.10 -0.39 4.33 -51.92 -0.23 -0.61 16 39 H 0.08 0.04 8.14 -51.93 -0.42 -0.39 16 40 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 41 H 0.40 -1.76 6.50 -40.82 -0.27 -2.03 16 42 H 0.15 -0.74 6.40 -52.49 -0.34 -1.08 16 43 H 0.13 -0.30 7.89 -51.93 -0.41 -0.71 16 44 H 0.38 -1.73 8.70 45.56 0.40 -1.34 16 45 H 0.15 -0.36 4.86 -52.49 -0.25 -0.61 16 LS Contribution 389.45 15.07 5.87 5.87 Total: 0.00 -7.94 389.45 -8.33 -16.27 By element: Atomic # 1 Polarization: -6.58 SS G_CDS: -5.64 Total: -12.21 kcal Atomic # 6 Polarization: 6.35 SS G_CDS: 0.72 Total: 7.07 kcal Atomic # 7 Polarization: 0.93 SS G_CDS: -0.34 Total: 0.59 kcal Atomic # 8 Polarization: -2.57 SS G_CDS: -0.37 Total: -2.94 kcal Atomic # 9 Polarization: -0.44 SS G_CDS: 0.07 Total: -0.36 kcal Atomic # 14 Polarization: -5.73 SS G_CDS: -6.40 Total: -12.13 kcal Atomic # 16 Polarization: 0.09 SS G_CDS: -2.25 Total: -2.16 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -7.94 -8.33 -16.27 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17310322_12360598.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -154.973 kcal (2) G-P(sol) polarization free energy of solvation -7.941 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -162.914 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.334 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.274 kcal (6) G-S(sol) free energy of system = (1) + (5) -171.247 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds