Wall clock time and date at job start Tue Mar 9 2021 15:11:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.37637 * 125.67836 * 2 1 4 4 C 1.46675 * 126.22294 * 0.02868 * 3 2 1 5 5 O 1.21695 * 120.00292 * 4.62000 * 4 3 2 6 6 N 1.34778 * 120.00071 * 184.61878 * 4 3 2 7 7 C 1.46500 * 120.00177 * 175.34355 * 6 4 3 8 8 C 1.52998 * 109.47066 * 180.27514 * 7 6 4 9 9 S 1.81405 * 109.46853 * 180.02562 * 8 7 6 10 10 C 1.81405 * 102.99741 * 185.08204 * 9 8 7 11 11 Si 1.86300 * 109.47099 * 79.61872 * 10 9 8 12 12 C 1.86301 * 109.46956 * 54.52580 * 11 10 9 13 13 C 1.86290 * 109.47089 * 174.52797 * 11 10 9 14 14 C 1.86303 * 109.46940 * 294.52835 * 11 10 9 15 15 C 1.37886 * 107.55180 * 179.76130 * 3 2 1 16 16 C 1.39873 * 107.09081 * 0.24156 * 15 3 2 17 17 Br 1.89103 * 126.07452 * 179.97438 * 16 15 3 18 18 C 1.35510 * 107.85249 * 0.02562 * 16 15 3 19 19 C 1.50704 * 125.56995 * 179.97438 * 18 16 15 20 20 O 1.42900 * 109.47187 * 304.44388 * 19 18 16 21 21 Si 1.86305 * 109.46802 * 64.43918 * 19 18 16 22 22 H 1.48503 * 109.47046 * 64.92335 * 21 19 18 23 23 H 1.48507 * 109.46704 * 184.91902 * 21 19 18 24 24 H 1.48497 * 109.47268 * 304.91787 * 21 19 18 25 25 H 1.08997 * 109.47160 * 94.15841 * 1 2 3 26 26 H 1.09003 * 109.46866 * 214.16232 * 1 2 3 27 27 H 1.08999 * 109.47010 * 334.15613 * 1 2 3 28 28 H 0.97004 * 119.99468 * 355.62650 * 6 4 3 29 29 H 1.08995 * 109.47555 * 300.28328 * 7 6 4 30 30 H 1.09006 * 109.46530 * 60.28176 * 7 6 4 31 31 H 1.08995 * 109.47598 * 300.00788 * 8 7 6 32 32 H 1.09006 * 109.46906 * 60.00892 * 8 7 6 33 33 H 1.08997 * 109.46951 * 199.61777 * 10 9 8 34 34 H 1.08998 * 109.46921 * 319.61949 * 10 9 8 35 35 H 1.08995 * 109.47144 * 60.00599 * 12 11 10 36 36 H 1.09005 * 109.46732 * 179.97438 * 12 11 10 37 37 H 1.08995 * 109.47665 * 299.99916 * 12 11 10 38 38 H 1.09006 * 109.47484 * 60.00216 * 13 11 10 39 39 H 1.09005 * 109.47281 * 179.97438 * 13 11 10 40 40 H 1.08995 * 109.47439 * 299.99663 * 13 11 10 41 41 H 1.09003 * 109.47023 * 67.21727 * 14 11 10 42 42 H 1.09005 * 109.46932 * 187.20995 * 14 11 10 43 43 H 1.08996 * 109.47063 * 307.21441 * 14 11 10 44 44 H 1.07997 * 126.45560 * 180.28012 * 15 3 2 45 45 H 1.08998 * 109.46802 * 184.44036 * 19 18 16 46 46 H 0.96691 * 114.00522 * 59.99666 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1180 0.0000 4 6 1.8121 2.5122 0.0006 5 8 0.6246 2.7643 0.0860 6 7 2.7086 3.5142 -0.0935 7 6 2.2487 4.9014 -0.1957 8 6 3.4578 5.8334 -0.2963 9 16 2.8883 7.5512 -0.4222 10 6 4.4281 8.4732 -0.6861 11 14 4.9374 8.3330 -2.4727 12 6 3.5318 8.8842 -3.5642 13 6 6.4236 9.4129 -2.7813 14 6 5.3658 6.5616 -2.8590 15 6 3.5782 0.6891 0.0055 16 6 3.5529 -0.7095 0.0032 17 35 5.0610 -1.8504 0.0078 18 6 2.2558 -1.1015 -0.0041 19 6 1.7713 -2.5285 -0.0094 20 8 2.3453 -3.2224 -1.1190 21 14 2.2814 -3.3633 1.5761 22 1 1.5907 -2.7164 2.7206 23 1 1.9091 -4.7999 1.5211 24 1 3.7509 -3.2391 1.7504 25 1 -0.3633 -0.0745 -1.0249 26 1 -0.3633 -0.8504 0.5771 27 1 -0.3633 0.9249 0.4480 28 1 3.6582 3.3165 -0.0976 29 1 1.6281 5.0139 -1.0847 30 1 1.6656 5.1569 0.6891 31 1 4.0784 5.7209 0.5926 32 1 4.0409 5.5779 -1.1812 33 1 4.2712 9.5220 -0.4343 34 1 5.2121 8.0604 -0.0513 35 1 3.2812 9.9206 -3.3382 36 1 3.8300 8.8026 -4.6094 37 1 2.6622 8.2524 -3.3837 38 1 7.2461 9.0904 -2.1427 39 1 6.7219 9.3305 -3.8265 40 1 6.1730 10.4493 -2.5553 41 1 4.4657 5.9494 -2.8026 42 1 5.7847 6.4999 -3.8635 43 1 6.0976 6.1990 -2.1372 44 1 4.4583 1.3149 0.0112 45 1 0.6848 -2.5430 -0.0945 46 1 3.3118 -3.2492 -1.1088 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17310322_5000100.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:11:33 Heat of formation + Delta-G solvation = -62.277877 kcal Electronic energy + Delta-G solvation = -25710.534733 eV Core-core repulsion = 21932.031864 eV Total energy + Delta-G solvation = -3778.502870 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 408.045 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -42.87773 -40.37068 -37.91246 -36.59969 -34.53411 -32.81641 -31.62633 -30.88343 -30.14581 -28.90953 -28.63326 -28.45272 -27.43149 -27.03786 -24.34186 -23.16270 -21.51167 -20.62233 -19.12913 -18.35258 -17.57336 -17.26995 -16.93716 -16.82067 -16.45285 -16.09935 -15.64298 -15.39111 -15.05392 -14.94882 -14.75479 -14.58129 -14.43996 -14.32227 -14.28896 -14.15210 -13.93901 -13.90666 -13.66621 -13.35926 -13.32091 -13.22072 -13.20979 -13.00240 -12.81666 -12.76531 -12.65215 -12.24341 -11.82315 -11.73686 -11.22632 -11.09222 -10.96228 -10.88724 -10.77184 -10.73254 -10.32333 -9.82536 -9.28235 -8.53571 0.13882 0.36106 0.52516 0.82848 1.14256 1.35541 1.40269 1.42671 1.47137 1.59803 1.71496 1.89542 1.91937 2.17388 2.30037 2.46998 3.15294 3.40432 3.43353 3.58323 3.65560 3.70065 3.82987 4.09783 4.11894 4.19268 4.25267 4.35881 4.53104 4.53967 4.55173 4.59158 4.60698 4.61999 4.62599 4.68786 4.75164 4.78377 4.83776 5.12997 5.26532 5.33061 5.40147 5.56099 5.57732 5.77320 6.25061 6.29260 6.98775 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.053 3.947 2 N -0.386 5.386 3 C -0.036 4.036 4 C 0.595 3.405 5 O -0.537 6.537 6 N -0.716 5.716 7 C 0.139 3.861 8 C -0.127 4.127 9 S -0.215 6.215 10 C -0.383 4.383 11 Si 1.001 2.999 12 C -0.444 4.444 13 C -0.446 4.446 14 C -0.454 4.454 15 C -0.104 4.104 16 C -0.178 4.178 17 Br -0.016 7.016 18 C 0.058 3.942 19 C -0.063 4.063 20 O -0.527 6.527 21 Si 0.923 3.077 22 H -0.246 1.246 23 H -0.237 1.237 24 H -0.214 1.214 25 H 0.086 0.914 26 H 0.088 0.912 27 H 0.116 0.884 28 H 0.405 0.595 29 H 0.083 0.917 30 H 0.082 0.918 31 H 0.090 0.910 32 H 0.102 0.898 33 H 0.118 0.882 34 H 0.096 0.904 35 H 0.067 0.933 36 H 0.068 0.932 37 H 0.078 0.922 38 H 0.068 0.932 39 H 0.072 0.928 40 H 0.070 0.930 41 H 0.073 0.927 42 H 0.075 0.925 43 H 0.067 0.933 44 H 0.157 0.843 45 H 0.121 0.879 46 H 0.376 0.624 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.261 0.823 0.078 3.364 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 N -0.059 5.059 3 C -0.151 4.151 4 C 0.382 3.618 5 O -0.415 6.415 6 N -0.369 5.369 7 C 0.015 3.985 8 C -0.275 4.275 9 S 0.011 5.989 10 C -0.577 4.577 11 Si 1.198 2.802 12 C -0.552 4.552 13 C -0.555 4.555 14 C -0.561 4.561 15 C -0.131 4.131 16 C -0.263 4.263 17 Br 0.068 6.932 18 C -0.064 4.064 19 C -0.173 4.173 20 O -0.334 6.334 21 Si 0.739 3.261 22 H -0.169 1.169 23 H -0.159 1.159 24 H -0.135 1.135 25 H 0.104 0.896 26 H 0.107 0.893 27 H 0.135 0.865 28 H 0.240 0.760 29 H 0.101 0.899 30 H 0.100 0.900 31 H 0.109 0.891 32 H 0.120 0.880 33 H 0.136 0.864 34 H 0.115 0.885 35 H 0.087 0.913 36 H 0.087 0.913 37 H 0.097 0.903 38 H 0.088 0.912 39 H 0.091 0.909 40 H 0.089 0.911 41 H 0.092 0.908 42 H 0.094 0.906 43 H 0.087 0.913 44 H 0.174 0.826 45 H 0.139 0.861 46 H 0.227 0.773 Dipole moment (debyes) X Y Z Total from point charges 1.132 0.557 0.853 1.523 hybrid contribution 1.834 0.197 -0.301 1.870 sum 2.967 0.754 0.551 3.110 Atomic orbital electron populations 1.22552 0.74799 1.06540 1.04791 1.43762 1.07257 1.03787 1.51061 1.19949 0.89736 0.87734 1.17654 1.16771 0.85572 0.83105 0.76330 1.90822 1.16046 1.84540 1.50139 1.45565 1.09998 1.05893 1.75460 1.21002 0.95046 0.78346 1.04123 1.23872 1.01411 0.95545 1.06711 1.86890 1.14436 1.01561 1.96019 1.28097 1.00417 1.05918 1.23308 0.79232 0.67763 0.67920 0.65302 1.26094 1.13784 1.06051 1.09287 1.26080 1.14351 1.09859 1.05179 1.26301 1.05186 1.18930 1.05684 1.21164 0.95171 0.92857 1.03928 1.20680 0.90973 0.94664 1.20033 1.96650 1.36430 1.62147 1.98019 1.20903 0.89525 0.90134 1.05851 1.24728 1.02755 0.87461 1.02370 1.86550 1.26194 1.75335 1.45311 0.86011 0.84695 0.81039 0.74367 1.16899 1.15942 1.13526 0.89571 0.89331 0.86533 0.76017 0.89905 0.89973 0.89125 0.87963 0.86369 0.88497 0.91349 0.91329 0.90252 0.91246 0.90884 0.91071 0.90781 0.90570 0.91339 0.82560 0.86113 0.77340 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.03 10.26 59.85 0.61 0.58 16 2 N -0.39 -0.50 3.16 -115.58 -0.37 -0.86 16 3 C -0.04 -0.05 6.89 -81.98 -0.56 -0.61 16 4 C 0.60 1.04 7.77 -12.85 -0.10 0.94 16 5 O -0.54 -2.51 14.57 5.19 0.08 -2.43 16 6 N -0.72 0.81 5.54 -61.62 -0.34 0.47 16 7 C 0.14 -0.12 5.69 -4.04 -0.02 -0.14 16 8 C -0.13 0.31 5.89 37.16 0.22 0.53 16 9 S -0.21 0.11 20.93 -107.50 -2.25 -2.14 16 10 C -0.38 0.97 5.17 101.05 0.52 1.49 16 11 Si 1.00 -3.50 12.04 -169.99 -2.05 -5.54 16 12 C -0.44 0.69 8.65 101.05 0.87 1.57 16 13 C -0.45 1.12 8.65 101.05 0.87 1.99 16 14 C -0.45 1.38 7.55 101.05 0.76 2.14 16 15 C -0.10 -0.01 10.34 -39.10 -0.40 -0.41 16 16 C -0.18 -0.18 6.08 -39.94 -0.24 -0.42 16 17 Br -0.02 0.00 28.79 -68.01 -1.96 -1.96 16 18 C 0.06 0.07 5.32 -81.90 -0.44 -0.37 16 19 C -0.06 0.00 2.80 36.01 0.10 0.10 16 20 O -0.53 -0.73 12.88 -35.23 -0.45 -1.18 16 21 Si 0.92 -0.23 26.85 -169.99 -4.56 -4.79 16 22 H -0.25 -0.12 7.11 56.52 0.40 0.28 16 23 H -0.24 -0.10 7.11 56.52 0.40 0.30 16 24 H -0.21 0.04 5.54 56.52 0.31 0.36 16 25 H 0.09 -0.10 8.14 -51.93 -0.42 -0.53 16 26 H 0.09 -0.26 7.27 -51.93 -0.38 -0.64 16 27 H 0.12 0.07 6.00 -51.93 -0.31 -0.24 16 28 H 0.40 -1.52 7.37 -40.82 -0.30 -1.82 16 29 H 0.08 0.01 8.14 -51.93 -0.42 -0.42 16 30 H 0.08 0.04 8.14 -51.93 -0.42 -0.39 16 31 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 32 H 0.10 -0.37 4.66 -51.92 -0.24 -0.61 16 33 H 0.12 -0.31 7.96 -51.93 -0.41 -0.73 16 34 H 0.10 -0.33 7.96 -51.92 -0.41 -0.74 16 35 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 36 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 37 H 0.08 -0.07 7.96 -51.93 -0.41 -0.48 16 38 H 0.07 -0.18 7.96 -51.93 -0.41 -0.59 16 39 H 0.07 -0.16 7.96 -51.93 -0.41 -0.58 16 40 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 41 H 0.07 -0.21 6.13 -51.93 -0.32 -0.53 16 42 H 0.08 -0.20 7.96 -51.93 -0.41 -0.62 16 43 H 0.07 -0.24 7.96 -51.93 -0.41 -0.65 16 44 H 0.16 -0.43 7.45 -52.49 -0.39 -0.82 16 45 H 0.12 -0.20 6.66 -51.93 -0.35 -0.55 16 46 H 0.38 -0.03 6.18 45.56 0.28 0.26 16 LS Contribution 399.49 15.07 6.02 6.02 Total: 0.00 -6.70 399.49 -10.40 -17.11 By element: Atomic # 1 Polarization: -5.34 SS G_CDS: -6.72 Total: -12.05 kcal Atomic # 6 Polarization: 5.18 SS G_CDS: 2.20 Total: 7.38 kcal Atomic # 7 Polarization: 0.31 SS G_CDS: -0.71 Total: -0.39 kcal Atomic # 8 Polarization: -3.23 SS G_CDS: -0.38 Total: -3.61 kcal Atomic # 14 Polarization: -3.73 SS G_CDS: -6.61 Total: -10.34 kcal Atomic # 16 Polarization: 0.11 SS G_CDS: -2.25 Total: -2.14 kcal Atomic # 35 Polarization: 0.00 SS G_CDS: -1.96 Total: -1.96 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -6.70 -10.40 -17.11 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17310322_5000100.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.172 kcal (2) G-P(sol) polarization free energy of solvation -6.703 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.875 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.403 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.106 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.278 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds