Wall clock time and date at job start Tue Mar 9 2021 13:40:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35980 * 116.99632 * 2 1 4 4 C 1.38675 * 120.00409 * 0.02562 * 3 2 1 5 5 C 1.38160 * 120.00081 * 179.74470 * 4 3 2 6 6 C 1.38670 * 119.99656 * 0.50996 * 5 4 3 7 7 O 1.35988 * 119.99954 * 179.73986 * 6 5 4 8 8 C 1.42898 * 116.99524 * 359.73146 * 7 6 5 9 9 C 1.50706 * 109.47060 * 179.97438 * 8 7 6 10 10 O 1.21281 * 119.99699 * 359.97438 * 9 8 7 11 11 N 1.34773 * 120.00080 * 180.02562 * 9 8 7 12 12 C 1.46506 * 119.99969 * 180.02562 * 11 9 8 13 13 C 1.52998 * 109.47237 * 179.72043 * 12 11 9 14 14 C 1.53573 * 109.47298 * 66.45247 * 13 12 11 15 15 C 1.55142 * 111.29462 * 169.06014 * 14 13 12 16 16 Si 1.89338 * 101.34667 * 331.41516 * 15 14 13 17 17 C 1.86298 * 111.45914 * 120.85141 * 16 15 14 18 18 C 1.86298 * 111.45758 * 245.79617 * 16 15 14 19 19 C 1.55911 * 109.47189 * 186.49640 * 13 12 11 20 20 C 1.38716 * 120.00280 * 359.47106 * 6 5 4 21 21 C 1.50707 * 120.00077 * 180.29642 * 20 6 5 22 22 O 1.42905 * 109.46889 * 284.99827 * 21 20 6 23 23 Si 1.86300 * 109.47000 * 165.00012 * 21 20 6 24 24 H 1.48509 * 109.47124 * 60.00130 * 23 21 20 25 25 H 1.48501 * 109.47013 * 179.97438 * 23 21 20 26 26 H 1.48501 * 109.47007 * 300.00126 * 23 21 20 27 27 C 1.38111 * 119.99852 * 0.27501 * 20 6 5 28 28 H 1.08997 * 109.47165 * 60.00116 * 1 2 3 29 29 H 1.08998 * 109.47111 * 179.97438 * 1 2 3 30 30 H 1.08999 * 109.47228 * 299.99849 * 1 2 3 31 31 H 1.08004 * 119.99757 * 0.02562 * 4 3 2 32 32 H 1.07999 * 119.99984 * 180.25238 * 5 4 3 33 33 H 1.09004 * 109.47454 * 60.00061 * 8 7 6 34 34 H 1.08998 * 109.47671 * 299.99841 * 8 7 6 35 35 H 0.97005 * 120.00161 * 359.72088 * 11 9 8 36 36 H 1.09001 * 109.46512 * 299.72412 * 12 11 9 37 37 H 1.08998 * 109.47174 * 59.71534 * 12 11 9 38 38 H 1.08996 * 109.46978 * 306.45199 * 13 12 11 39 39 H 1.09007 * 109.12789 * 289.54725 * 14 13 12 40 40 H 1.09005 * 109.12280 * 48.57219 * 14 13 12 41 41 H 1.08998 * 111.04876 * 89.42814 * 15 14 13 42 42 H 1.08998 * 111.05252 * 213.35911 * 15 14 13 43 43 H 1.09004 * 109.46992 * 60.00035 * 17 16 15 44 44 H 1.09002 * 109.46729 * 180.02562 * 17 16 15 45 45 H 1.08994 * 109.47456 * 299.99907 * 17 16 15 46 46 H 1.09005 * 109.47313 * 59.99743 * 18 16 15 47 47 H 1.09001 * 109.47335 * 179.97438 * 18 16 15 48 48 H 1.08997 * 109.47335 * 299.99813 * 18 16 15 49 49 H 1.08999 * 111.42569 * 316.88203 * 19 13 12 50 50 H 1.08993 * 111.42505 * 81.82823 * 19 13 12 51 51 H 1.08992 * 109.46933 * 45.00068 * 21 20 6 52 52 H 0.96702 * 113.99999 * 60.00237 * 22 21 20 53 53 H 1.08001 * 119.99978 * 179.97438 * 27 20 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2116 0.0000 4 6 1.2910 2.3747 0.0005 5 6 1.9182 3.6057 0.0059 6 6 3.3030 3.6782 0.0000 7 8 3.9204 4.8899 -0.0001 8 6 3.0804 6.0459 0.0001 9 6 3.9346 7.2875 0.0005 10 8 5.1436 7.1917 0.0012 11 7 3.3549 8.5042 0.0013 12 6 4.1853 9.7112 0.0012 13 6 3.2860 10.9490 -0.0049 14 6 2.5126 11.0264 1.3196 15 6 1.7998 12.3954 1.4767 16 14 2.9385 13.5257 0.4714 17 6 2.0214 14.3484 -0.9261 18 6 3.7827 14.7824 1.5571 19 6 4.1626 12.2275 -0.1713 20 6 4.0586 2.5149 -0.0001 21 6 5.5636 2.5938 0.0002 22 8 6.0213 2.9673 -1.3010 23 14 6.2724 0.9319 0.4545 24 1 5.8301 -0.0825 -0.5359 25 1 7.7554 1.0094 0.4543 26 1 5.7967 0.5437 1.8067 27 6 3.4316 1.2843 -0.0002 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0276 -0.0005 30 1 -0.3633 0.5138 0.8900 31 1 0.2125 2.3181 0.0014 32 1 1.3300 4.5114 0.0104 33 1 2.4513 6.0378 0.8902 34 1 2.4510 6.0379 -0.8898 35 1 2.3879 8.5808 -0.0026 36 1 4.8115 9.7213 0.8933 37 1 4.8177 9.7171 -0.8866 38 1 2.5814 10.8820 -0.8337 39 1 1.7677 10.2309 1.3453 40 1 3.2079 10.8886 2.1477 41 1 0.7983 12.3669 1.0474 42 1 1.7666 12.7019 2.5221 43 1 1.2070 14.9498 -0.5219 44 1 2.7057 14.9893 -1.4821 45 1 1.6151 13.5872 -1.5920 46 1 4.3820 14.2690 2.3090 47 1 4.4287 15.4140 0.9472 48 1 3.0316 15.3994 2.0504 49 1 5.0566 12.1810 0.4505 50 1 4.4166 12.4028 -1.2166 51 1 5.8881 3.3382 0.7271 52 1 5.6907 3.8243 -1.6033 53 1 4.0198 0.3785 -0.0007 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17310366_4974302.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:40:15 Heat of formation + Delta-G solvation = -165.850147 kcal Electronic energy + Delta-G solvation = -30737.175161 eV Core-core repulsion = 26504.682204 eV Total energy + Delta-G solvation = -4232.492958 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 367.182 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -41.79838 -40.84933 -39.85405 -38.20846 -37.71886 -36.80116 -34.76376 -32.77598 -31.35602 -30.64706 -29.52427 -29.28828 -28.59272 -28.10654 -26.62286 -26.47039 -24.23747 -23.59502 -22.37101 -21.63560 -20.92131 -19.52693 -18.79541 -18.51047 -17.89823 -17.56138 -17.37018 -17.04267 -16.70090 -16.36122 -16.16396 -15.67478 -15.64391 -15.49702 -15.30916 -14.94217 -14.66810 -14.56989 -14.13544 -14.09180 -14.05070 -14.01286 -13.82724 -13.64347 -13.63708 -13.49261 -13.40056 -13.27911 -13.05777 -12.75182 -12.61055 -12.39419 -12.28493 -12.07011 -12.04068 -11.61182 -11.60198 -11.49595 -11.10774 -10.98516 -10.96885 -10.86192 -10.57549 -10.49857 -10.15988 -10.04887 -8.79449 0.09585 0.37588 1.35633 1.39866 1.49585 1.53980 1.66571 1.71632 1.75317 1.78729 2.13247 2.27729 2.42705 2.56524 2.59256 3.42670 3.57114 3.64346 3.69514 3.77611 3.85500 3.86043 3.93166 3.98278 4.09225 4.14084 4.15400 4.18076 4.35648 4.36251 4.39045 4.45784 4.49349 4.54944 4.60341 4.62002 4.64158 4.65418 4.66498 4.67600 4.81979 4.92008 5.01279 5.06653 5.13067 5.13840 5.21023 5.22425 5.31336 5.34502 5.40728 5.43014 5.43558 6.10235 6.32684 6.41194 6.77957 7.09007 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.315 6.315 3 C 0.103 3.897 4 C -0.165 4.165 5 C -0.165 4.165 6 C 0.103 3.897 7 O -0.289 6.289 8 C 0.041 3.959 9 C 0.514 3.486 10 O -0.512 6.512 11 N -0.728 5.728 12 C 0.129 3.871 13 C -0.098 4.098 14 C -0.112 4.112 15 C -0.399 4.399 16 Si 0.969 3.031 17 C -0.443 4.443 18 C -0.444 4.444 19 C -0.391 4.391 20 C -0.098 4.098 21 C -0.084 4.084 22 O -0.536 6.536 23 Si 1.014 2.986 24 H -0.251 1.251 25 H -0.255 1.255 26 H -0.248 1.248 27 C -0.116 4.116 28 H 0.056 0.944 29 H 0.102 0.898 30 H 0.056 0.944 31 H 0.135 0.865 32 H 0.134 0.866 33 H 0.093 0.907 34 H 0.094 0.906 35 H 0.401 0.599 36 H 0.071 0.929 37 H 0.072 0.928 38 H 0.080 0.920 39 H 0.060 0.940 40 H 0.065 0.935 41 H 0.076 0.924 42 H 0.078 0.922 43 H 0.070 0.930 44 H 0.070 0.930 45 H 0.069 0.931 46 H 0.071 0.929 47 H 0.070 0.930 48 H 0.069 0.931 49 H 0.083 0.917 50 H 0.081 0.919 51 H 0.082 0.918 52 H 0.371 0.629 53 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.323 4.269 0.898 8.524 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.229 6.229 3 C 0.058 3.942 4 C -0.184 4.184 5 C -0.184 4.184 6 C 0.058 3.942 7 O -0.202 6.202 8 C -0.038 4.038 9 C 0.298 3.702 10 O -0.386 6.386 11 N -0.383 5.383 12 C 0.006 3.994 13 C -0.116 4.116 14 C -0.149 4.149 15 C -0.486 4.486 16 Si 1.167 2.833 17 C -0.551 4.551 18 C -0.552 4.552 19 C -0.478 4.478 20 C -0.099 4.099 21 C -0.193 4.193 22 O -0.341 6.341 23 Si 0.834 3.166 24 H -0.175 1.175 25 H -0.179 1.179 26 H -0.171 1.171 27 C -0.134 4.134 28 H 0.074 0.926 29 H 0.121 0.879 30 H 0.074 0.926 31 H 0.153 0.847 32 H 0.151 0.849 33 H 0.111 0.889 34 H 0.111 0.889 35 H 0.236 0.764 36 H 0.090 0.910 37 H 0.090 0.910 38 H 0.098 0.902 39 H 0.079 0.921 40 H 0.084 0.916 41 H 0.094 0.906 42 H 0.097 0.903 43 H 0.089 0.911 44 H 0.089 0.911 45 H 0.089 0.911 46 H 0.090 0.910 47 H 0.089 0.911 48 H 0.088 0.912 49 H 0.102 0.898 50 H 0.100 0.900 51 H 0.100 0.900 52 H 0.219 0.781 53 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -5.488 2.725 1.156 6.235 hybrid contribution -1.835 1.306 -0.177 2.259 sum -7.323 4.032 0.980 8.416 Atomic orbital electron populations 1.23098 0.78067 1.04362 1.01340 1.86112 1.21561 1.26311 1.88919 1.18795 0.91893 0.84551 0.98929 1.21076 1.00292 0.91505 1.05492 1.21021 0.92874 0.98640 1.05865 1.18626 0.90758 0.84594 1.00262 1.86118 1.33827 1.11005 1.89201 1.22464 0.93221 0.84202 1.03941 1.20009 0.88825 0.84194 0.77156 1.90793 1.14110 1.86569 1.47110 1.45915 1.10672 1.05377 1.76292 1.21533 0.93210 0.81759 1.02903 1.21887 0.96968 0.94173 0.98613 1.21778 0.98750 0.97586 0.96827 1.26500 1.07296 1.06157 1.08598 0.80489 0.67815 0.67443 0.67564 1.26029 1.08290 1.07569 1.13229 1.26028 1.07710 1.11620 1.09826 1.26765 1.07158 1.07433 1.06397 1.19432 0.96709 0.89925 1.03841 1.25241 0.91358 1.13416 0.89241 1.86667 1.73763 1.42117 1.31577 0.84486 0.79695 0.72833 0.79630 1.17471 1.17875 1.17132 1.20228 0.92020 0.97393 1.03796 0.92559 0.87917 0.92553 0.84725 0.84870 0.88914 0.88866 0.76443 0.91045 0.91001 0.90204 0.92114 0.91598 0.90554 0.90301 0.91108 0.91121 0.91133 0.91028 0.91120 0.91173 0.89786 0.89977 0.90031 0.78075 0.84090 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 9.81 101.05 0.99 0.95 16 2 O -0.32 -0.70 10.50 -19.68 -0.21 -0.90 16 3 C 0.10 0.24 6.69 -39.24 -0.26 -0.02 16 4 C -0.16 -0.07 9.03 -39.45 -0.36 -0.43 16 5 C -0.17 -0.01 9.03 -39.45 -0.36 -0.36 16 6 C 0.10 0.20 6.62 -39.25 -0.26 -0.06 16 7 O -0.29 -0.61 8.56 -39.61 -0.34 -0.94 16 8 C 0.04 -0.05 5.22 36.01 0.19 0.13 16 9 C 0.51 0.53 7.91 -10.98 -0.09 0.45 16 10 O -0.51 -3.05 16.50 -14.35 -0.24 -3.28 16 11 N -0.73 1.34 5.37 -60.29 -0.32 1.01 16 12 C 0.13 -0.14 5.05 -4.04 -0.02 -0.16 16 13 C -0.10 0.29 2.19 -88.77 -0.19 0.10 16 14 C -0.11 0.33 5.16 -25.30 -0.13 0.20 16 15 C -0.40 1.24 5.85 38.29 0.22 1.47 16 16 Si 0.97 -3.84 13.36 -169.99 -2.27 -6.11 16 17 C -0.44 1.22 8.65 101.05 0.87 2.09 16 18 C -0.44 1.07 8.65 101.05 0.87 1.94 16 19 C -0.39 1.17 5.29 38.71 0.20 1.37 16 20 C -0.10 -0.29 5.28 -104.49 -0.55 -0.84 16 21 C -0.08 -0.26 2.33 36.01 0.08 -0.17 16 22 O -0.54 -2.18 12.65 -35.23 -0.45 -2.63 16 23 Si 1.01 2.37 25.75 -169.99 -4.38 -2.00 16 24 H -0.25 -0.70 6.73 56.52 0.38 -0.32 16 25 H -0.25 -0.83 7.11 56.52 0.40 -0.43 16 26 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 27 C -0.12 -0.35 8.59 -39.45 -0.34 -0.69 16 28 H 0.06 -0.15 7.66 -51.93 -0.40 -0.54 16 29 H 0.10 -0.31 8.14 -51.93 -0.42 -0.74 16 30 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 31 H 0.13 -0.26 6.29 -52.48 -0.33 -0.59 16 32 H 0.13 -0.39 6.29 -52.49 -0.33 -0.72 16 33 H 0.09 -0.34 7.65 -51.93 -0.40 -0.74 16 34 H 0.09 -0.35 7.67 -51.93 -0.40 -0.75 16 35 H 0.40 -1.94 7.84 -40.82 -0.32 -2.26 16 36 H 0.07 0.01 8.07 -51.93 -0.42 -0.41 16 37 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 38 H 0.08 -0.30 8.13 -51.93 -0.42 -0.72 16 39 H 0.06 -0.21 7.55 -51.92 -0.39 -0.61 16 40 H 0.07 -0.15 8.04 -51.93 -0.42 -0.56 16 41 H 0.08 -0.24 8.04 -51.93 -0.42 -0.66 16 42 H 0.08 -0.21 8.04 -51.93 -0.42 -0.63 16 43 H 0.07 -0.18 7.96 -51.93 -0.41 -0.59 16 44 H 0.07 -0.17 7.96 -51.93 -0.41 -0.59 16 45 H 0.07 -0.19 7.96 -51.93 -0.41 -0.61 16 46 H 0.07 -0.15 7.96 -51.93 -0.41 -0.57 16 47 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 48 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 49 H 0.08 -0.22 8.03 -51.93 -0.42 -0.63 16 50 H 0.08 -0.24 8.06 -51.93 -0.42 -0.66 16 51 H 0.08 0.22 7.82 -51.93 -0.41 -0.19 16 52 H 0.37 0.93 8.60 45.56 0.39 1.32 16 53 H 0.14 0.34 4.89 -52.49 -0.26 0.08 16 LS Contribution 425.37 15.07 6.41 6.41 Total: 0.00 -8.52 425.37 -9.21 -17.73 By element: Atomic # 1 Polarization: -6.95 SS G_CDS: -8.31 Total: -15.25 kcal Atomic # 6 Polarization: 5.09 SS G_CDS: 0.88 Total: 5.98 kcal Atomic # 7 Polarization: 1.34 SS G_CDS: -0.32 Total: 1.01 kcal Atomic # 8 Polarization: -6.53 SS G_CDS: -1.23 Total: -7.76 kcal Atomic # 14 Polarization: -1.47 SS G_CDS: -6.65 Total: -8.12 kcal Total LS contribution 6.41 Total: 6.41 kcal Total: -8.52 -9.21 -17.73 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17310366_4974302.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -148.122 kcal (2) G-P(sol) polarization free energy of solvation -8.515 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -156.637 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.213 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.728 kcal (6) G-S(sol) free energy of system = (1) + (5) -165.850 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds