Wall clock time and date at job start Tue Mar 9 2021 15:24:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34230 * 116.99774 * 2 1 4 4 O 1.20826 * 119.99875 * 0.02562 * 3 2 1 5 5 C 1.50702 * 119.99954 * 179.97438 * 3 2 1 6 6 C 1.52997 * 109.47048 * 180.02562 * 5 3 2 7 7 H 1.09000 * 112.90903 * 43.74734 * 6 5 3 8 8 C 1.53784 * 113.61330 * 175.00106 * 6 5 3 9 9 C 1.53787 * 87.07923 * 139.97966 * 8 6 5 10 10 H 1.08998 * 113.61103 * 89.12089 * 9 8 6 11 11 N 1.46502 * 113.61178 * 220.01667 * 9 8 6 12 12 C 1.34778 * 119.99671 * 204.99949 * 11 9 8 13 13 O 1.21588 * 120.00244 * 0.02562 * 12 11 9 14 14 C 1.47576 * 119.99728 * 180.02562 * 12 11 9 15 15 C 1.40198 * 119.83671 * 359.72539 * 14 12 11 16 16 C 1.36233 * 120.38449 * 179.75442 * 15 14 12 17 17 C 1.39877 * 119.95669 * 0.52251 * 16 15 14 18 18 C 1.46257 * 133.84455 * 179.73937 * 17 16 15 19 19 C 1.50697 * 126.47957 * 359.97141 * 18 17 16 20 20 O 1.42901 * 109.46780 * 75.00842 * 19 18 17 21 21 Si 1.86301 * 109.47006 * 195.00367 * 19 18 17 22 22 C 1.34449 * 107.03698 * 180.02562 * 18 17 16 23 23 N 1.36564 * 109.98583 * 359.97438 * 22 18 17 24 24 C 1.37834 * 109.86024 * 0.02562 * 23 22 18 25 25 C 1.38640 * 133.37766 * 179.97438 * 24 23 22 26 26 C 1.53778 * 87.08035 * 334.56830 * 9 8 6 27 27 H 1.08999 * 109.47234 * 59.99844 * 1 2 3 28 28 H 1.08999 * 109.47029 * 180.02562 * 1 2 3 29 29 H 1.09007 * 109.47439 * 299.99889 * 1 2 3 30 30 H 1.09004 * 109.46854 * 60.00293 * 5 3 2 31 31 H 1.08995 * 109.46935 * 300.00236 * 5 3 2 32 32 H 1.09004 * 113.61451 * 25.43452 * 8 6 5 33 33 H 1.08994 * 113.61477 * 254.52754 * 8 6 5 34 34 H 0.97000 * 119.99909 * 25.00926 * 11 9 8 35 35 H 1.08008 * 119.80719 * 0.02779 * 15 14 12 36 36 H 1.07995 * 120.02484 * 180.23904 * 16 15 14 37 37 H 1.08998 * 109.47417 * 315.00692 * 19 18 17 38 38 H 0.96699 * 114.00217 * 180.02562 * 20 19 18 39 39 H 1.48500 * 109.99903 * 299.99995 * 21 19 18 40 40 H 1.48494 * 110.00005 * 61.32096 * 21 19 18 41 41 H 1.08005 * 125.00918 * 180.02562 * 22 18 17 42 42 H 0.97005 * 125.07357 * 180.02562 * 23 22 18 43 43 H 1.07996 * 120.17097 * 0.02562 * 25 24 23 44 44 H 1.08999 * 113.61111 * 139.98327 * 26 9 8 45 45 H 1.08999 * 113.61280 * 270.79710 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.0000 2.7421 0.0011 7 1 3.4245 3.3545 0.6953 8 6 5.5208 2.9349 0.1245 9 6 5.3816 4.0675 -0.9065 10 1 5.1839 5.0421 -0.4603 11 7 6.4654 4.1006 -1.8917 12 6 6.7758 5.2554 -2.5134 13 8 6.1566 6.2698 -2.2563 14 6 7.8672 5.2887 -3.5062 15 6 8.5826 4.1183 -3.7958 16 6 9.5889 4.1352 -4.7139 17 6 9.9200 5.3278 -5.3655 18 6 10.9184 5.6894 -6.3713 19 6 11.9270 4.7663 -7.0048 20 8 11.2723 3.9289 -7.9599 21 14 13.2403 5.7741 -7.8595 22 6 10.7668 7.0015 -6.6229 23 7 9.7531 7.5087 -5.8612 24 6 9.2116 6.5118 -5.0784 25 6 8.1855 6.4845 -4.1464 26 6 4.1163 3.3506 -1.4064 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3634 0.5138 0.8900 30 1 3.9564 0.7807 -0.8892 31 1 3.9556 0.7810 0.8908 32 1 6.0994 2.0846 -0.2365 33 1 5.8390 3.2774 1.1091 34 1 6.9595 3.2914 -2.0965 35 1 8.3316 3.1969 -3.2912 36 1 10.1337 3.2294 -4.9353 37 1 12.3876 4.1477 -6.2345 38 1 11.8623 3.3072 -8.4077 39 1 12.6251 6.6218 -8.9122 40 1 13.9500 6.6259 -6.8717 41 1 11.3587 7.5702 -7.3247 42 1 9.4582 8.4328 -5.8697 43 1 7.6354 7.3853 -3.9183 44 1 3.3008 4.0288 -1.6577 45 1 4.3108 2.6150 -2.1869 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17321982_12335838.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:24:46 Heat of formation + Delta-G solvation = -63.256928 kcal Electronic energy + Delta-G solvation = -28702.020596 eV Core-core repulsion = 24459.616422 eV Total energy + Delta-G solvation = -4242.404173 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.145 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -42.48253 -41.64609 -40.93871 -39.50171 -37.79375 -37.46988 -37.33402 -34.78021 -33.35583 -31.79963 -30.77132 -30.41536 -28.41299 -26.77040 -26.50913 -25.47019 -23.72521 -23.60196 -21.81713 -21.42882 -20.68744 -20.47558 -19.22150 -18.54210 -18.35749 -18.18794 -17.85477 -17.49785 -17.27416 -16.96723 -16.20177 -15.95265 -15.82818 -15.62107 -15.36670 -15.06379 -14.89459 -14.80772 -14.73491 -14.52549 -14.44048 -13.84409 -13.82301 -13.60238 -13.40181 -13.22198 -12.97515 -12.87898 -12.59021 -12.56348 -12.15733 -12.07773 -11.91064 -11.88627 -11.73905 -11.42453 -11.32258 -10.83659 -10.75476 -10.23910 -10.00309 -9.35151 -8.82191 -5.05368 -0.25530 0.39952 1.26358 1.26527 1.32320 1.62050 1.73683 1.88177 1.92724 2.02605 2.27726 2.93698 3.37076 3.41045 3.51624 3.57243 3.66861 3.70366 3.77082 3.81937 3.88376 3.99112 4.08458 4.19039 4.22103 4.23771 4.26123 4.32086 4.38303 4.44097 4.46835 4.56493 4.60567 4.62298 4.71328 4.73336 4.81413 4.97622 4.98923 5.07466 5.22622 5.27814 5.43174 5.44364 5.46968 5.59618 5.60244 5.98141 6.34611 6.53709 6.69168 6.79583 7.27982 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.363 6.363 3 C 0.458 3.542 4 O -0.503 6.503 5 C -0.102 4.102 6 C -0.099 4.099 7 H 0.108 0.892 8 C -0.139 4.139 9 C 0.124 3.876 10 H 0.119 0.881 11 N -0.716 5.716 12 C 0.564 3.436 13 O -0.537 6.537 14 C -0.121 4.121 15 C -0.113 4.113 16 C -0.070 4.070 17 C -0.062 4.062 18 C -0.164 4.164 19 C -0.033 4.033 20 O -0.547 6.547 21 Si 0.684 3.316 22 C 0.072 3.928 23 N -0.583 5.583 24 C 0.082 3.918 25 C -0.056 4.056 26 C -0.147 4.147 27 H 0.063 0.937 28 H 0.102 0.898 29 H 0.063 0.937 30 H 0.108 0.892 31 H 0.110 0.890 32 H 0.091 0.909 33 H 0.081 0.919 34 H 0.401 0.599 35 H 0.127 0.873 36 H 0.131 0.869 37 H 0.071 0.929 38 H 0.379 0.621 39 H -0.254 1.254 40 H -0.256 1.256 41 H 0.170 0.830 42 H 0.423 0.577 43 H 0.137 0.863 44 H 0.077 0.923 45 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.653 -5.573 -1.191 8.027 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.301 3.699 4 O -0.390 6.390 5 C -0.140 4.140 6 C -0.118 4.118 7 H 0.126 0.874 8 C -0.178 4.178 9 C 0.019 3.981 10 H 0.136 0.864 11 N -0.367 5.367 12 C 0.352 3.648 13 O -0.415 6.415 14 C -0.125 4.125 15 C -0.133 4.133 16 C -0.089 4.089 17 C -0.067 4.067 18 C -0.171 4.171 19 C -0.145 4.145 20 O -0.353 6.353 21 Si 0.585 3.415 22 C -0.057 4.057 23 N -0.185 5.185 24 C -0.024 4.024 25 C -0.077 4.077 26 C -0.186 4.186 27 H 0.082 0.918 28 H 0.121 0.879 29 H 0.082 0.918 30 H 0.126 0.874 31 H 0.128 0.872 32 H 0.109 0.891 33 H 0.100 0.900 34 H 0.237 0.763 35 H 0.145 0.855 36 H 0.149 0.851 37 H 0.089 0.911 38 H 0.226 0.774 39 H -0.178 1.178 40 H -0.180 1.180 41 H 0.187 0.813 42 H 0.260 0.740 43 H 0.155 0.845 44 H 0.096 0.904 45 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges 4.710 -3.247 -0.999 5.807 hybrid contribution -0.559 0.059 0.194 0.594 sum 4.151 -3.188 -0.805 5.295 Atomic orbital electron populations 1.23297 0.75978 1.03909 1.02701 1.86506 1.23765 1.33564 1.84106 1.23831 0.92319 0.81380 0.72391 1.90697 1.67229 1.36315 1.44779 1.21407 0.87573 0.98902 1.06088 1.22253 0.96180 0.94136 0.99251 0.87420 1.23433 0.95684 0.98539 1.00105 1.22496 0.86458 0.99928 0.89226 0.86358 1.45861 1.36821 1.11475 1.42532 1.18180 0.82726 0.83324 0.80528 1.90795 1.52790 1.33513 1.64392 1.19447 0.98774 0.94096 1.00218 1.20677 0.96585 0.96995 0.99023 1.20172 0.97051 0.96529 0.95127 1.19151 0.96549 0.93015 0.98008 1.19614 1.01720 0.92944 1.02826 1.23932 0.98974 0.96979 0.94584 1.86542 1.38868 1.53511 1.56361 0.95100 0.81454 0.83221 0.81741 1.21649 0.92400 0.94711 0.96953 1.41679 1.30036 1.11080 1.35744 1.18080 0.98357 0.88619 0.97331 1.20081 0.94971 0.98544 0.94105 1.23570 0.98414 1.00220 0.96395 0.91786 0.87931 0.91781 0.87402 0.87181 0.89062 0.90000 0.76258 0.85529 0.85115 0.91095 0.77358 1.17819 1.18037 0.81324 0.73955 0.84546 0.90393 0.89560 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.50 10.57 -39.26 -0.41 -0.91 16 3 C 0.46 0.73 7.96 36.01 0.29 1.02 16 4 O -0.50 -2.39 15.51 -18.75 -0.29 -2.68 16 5 C -0.10 0.20 5.65 -27.88 -0.16 0.05 16 6 C -0.10 0.12 3.15 -89.81 -0.28 -0.17 16 7 H 0.11 0.03 7.68 -51.93 -0.40 -0.37 16 8 C -0.14 0.36 7.39 -25.91 -0.19 0.17 16 9 C 0.12 0.01 4.24 -67.12 -0.28 -0.28 16 10 H 0.12 0.24 7.46 -51.93 -0.39 -0.15 16 11 N -0.72 -0.08 5.30 -54.04 -0.29 -0.37 16 12 C 0.56 1.94 7.76 -12.45 -0.10 1.84 16 13 O -0.54 -3.85 15.91 5.29 0.08 -3.77 16 14 C -0.12 -0.31 5.87 -104.95 -0.62 -0.93 16 15 C -0.11 -0.06 9.46 -39.57 -0.37 -0.44 16 16 C -0.07 -0.10 10.03 -39.69 -0.40 -0.50 16 17 C -0.06 -0.19 6.35 -105.04 -0.67 -0.86 16 18 C -0.16 -0.37 5.61 -102.74 -0.58 -0.95 16 19 C -0.03 0.01 3.05 36.00 0.11 0.12 16 20 O -0.55 -0.07 12.86 -35.23 -0.45 -0.52 16 21 Si 0.68 -1.25 30.79 -169.99 -5.23 -6.49 16 22 C 0.07 0.09 10.43 -16.78 -0.17 -0.09 16 23 N -0.58 -0.51 6.07 -10.68 -0.06 -0.58 16 24 C 0.08 0.23 7.26 -84.00 -0.61 -0.38 16 25 C -0.06 -0.17 9.61 -39.03 -0.37 -0.55 16 26 C -0.15 0.00 7.43 -25.92 -0.19 -0.19 16 27 H 0.06 -0.01 8.13 -51.93 -0.42 -0.43 16 28 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 29 H 0.06 -0.01 8.13 -51.93 -0.42 -0.44 16 30 H 0.11 -0.39 7.85 -51.93 -0.41 -0.79 16 31 H 0.11 -0.41 8.14 -51.93 -0.42 -0.83 16 32 H 0.09 -0.39 8.08 -51.93 -0.42 -0.81 16 33 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 34 H 0.40 -1.08 6.72 -40.82 -0.27 -1.35 16 35 H 0.13 -0.34 6.36 -52.48 -0.33 -0.68 16 36 H 0.13 -0.05 8.06 -52.49 -0.42 -0.47 16 37 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 38 H 0.38 -1.90 8.74 45.56 0.40 -1.50 16 39 H -0.25 -0.21 7.04 56.52 0.40 0.19 16 40 H -0.26 -0.20 7.11 56.52 0.40 0.21 16 41 H 0.17 -0.13 6.30 -52.48 -0.33 -0.46 16 42 H 0.42 -0.86 8.96 -40.82 -0.37 -1.23 16 43 H 0.14 0.39 7.62 -52.49 -0.40 -0.01 16 44 H 0.08 0.17 8.14 -51.93 -0.42 -0.26 16 45 H 0.09 -0.08 7.90 -51.93 -0.41 -0.49 16 LS Contribution 381.47 15.07 5.75 5.75 Total: 0.00 -12.05 381.47 -10.35 -22.40 By element: Atomic # 1 Polarization: -5.85 SS G_CDS: -5.90 Total: -11.76 kcal Atomic # 6 Polarization: 2.47 SS G_CDS: -3.53 Total: -1.07 kcal Atomic # 7 Polarization: -0.60 SS G_CDS: -0.35 Total: -0.95 kcal Atomic # 8 Polarization: -6.81 SS G_CDS: -1.07 Total: -7.89 kcal Atomic # 14 Polarization: -1.25 SS G_CDS: -5.23 Total: -6.49 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -12.05 -10.35 -22.40 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_12335838.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.860 kcal (2) G-P(sol) polarization free energy of solvation -12.048 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.909 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.348 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.397 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.257 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds