Wall clock time and date at job start Tue Mar 9 2021 15:25:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34227 * 117.00024 * 2 1 4 4 O 1.20827 * 119.99905 * 0.02562 * 3 2 1 5 5 C 1.50703 * 120.00211 * 179.97438 * 3 2 1 6 6 C 1.53005 * 109.47155 * 179.97438 * 5 3 2 7 7 H 1.09001 * 112.85017 * 316.19727 * 6 5 3 8 8 C 1.53950 * 113.66268 * 87.44393 * 6 5 3 9 9 C 1.53783 * 87.01954 * 139.93131 * 8 6 5 10 10 H 1.08995 * 113.61664 * 89.22622 * 9 8 6 11 11 N 1.46500 * 113.61695 * 220.05052 * 9 8 6 12 12 C 1.34777 * 119.99585 * 254.13778 * 11 9 8 13 13 O 1.21581 * 120.00327 * 359.97438 * 12 11 9 14 14 C 1.47530 * 119.99682 * 179.97438 * 12 11 9 15 15 C 1.40146 * 120.19268 * 180.02562 * 14 12 11 16 16 O 1.35643 * 120.14732 * 359.95328 * 15 14 12 17 17 C 1.42900 * 117.00153 * 180.02562 * 16 15 14 18 18 C 1.38712 * 119.69937 * 179.97438 * 15 14 12 19 19 C 1.38050 * 120.08357 * 359.74398 * 18 15 14 20 20 C 1.38556 * 120.39416 * 0.50964 * 19 18 15 21 21 C 1.50699 * 119.85081 * 179.76571 * 20 19 18 22 22 O 1.42892 * 109.47249 * 119.72877 * 21 20 19 23 23 Si 1.86298 * 109.47032 * 359.72262 * 21 20 19 24 24 C 1.37782 * 120.29748 * 359.48957 * 20 19 18 25 25 C 1.53784 * 87.17328 * 334.63766 * 9 8 6 26 26 H 1.08997 * 109.47332 * 179.97438 * 1 2 3 27 27 H 1.09003 * 109.47299 * 300.00306 * 1 2 3 28 28 H 1.09004 * 109.47143 * 59.99758 * 1 2 3 29 29 H 1.09002 * 109.46766 * 60.00426 * 5 3 2 30 30 H 1.08994 * 109.47271 * 300.00231 * 5 3 2 31 31 H 1.08999 * 113.61884 * 25.41397 * 8 6 5 32 32 H 1.08997 * 113.67071 * 254.45576 * 8 6 5 33 33 H 0.97001 * 120.00230 * 74.12750 * 11 9 8 34 34 H 1.08997 * 109.47559 * 179.97438 * 17 16 15 35 35 H 1.09000 * 109.47267 * 300.00224 * 17 16 15 36 36 H 1.09003 * 109.46946 * 59.99975 * 17 16 15 37 37 H 1.08000 * 119.95579 * 180.02562 * 18 15 14 38 38 H 1.08002 * 119.80491 * 180.25636 * 19 18 15 39 39 H 1.09004 * 109.46453 * 239.72945 * 21 20 19 40 40 H 0.96703 * 114.00176 * 299.99748 * 22 21 20 41 41 H 1.48506 * 109.99834 * 58.68765 * 23 21 20 42 42 H 1.48502 * 110.00011 * 180.02562 * 23 21 20 43 43 H 1.08000 * 120.04503 * 180.22744 * 24 20 19 44 44 H 1.08996 * 113.62019 * 139.93554 * 25 9 8 45 45 H 1.08999 * 113.61727 * 270.84606 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5664 1.2749 0.0006 6 6 4.0002 2.7422 -0.0002 7 1 3.4252 3.3531 -0.6961 8 6 4.1144 3.3534 1.4081 9 6 5.3811 4.0677 0.9079 10 1 5.1851 5.0424 0.4612 11 7 6.4642 4.1012 1.8938 12 6 6.7538 5.2491 2.5379 13 8 6.1166 6.2569 2.3004 14 6 7.8441 5.2826 3.5312 15 6 8.1484 6.4739 4.2038 16 8 7.4423 7.6025 3.9438 17 6 7.8096 8.7788 4.6674 18 6 9.1753 6.4938 5.1361 19 6 9.8899 5.3432 5.4030 20 6 9.5956 4.1646 4.7365 21 6 10.3870 2.9171 5.0337 22 8 9.5088 1.9007 5.5212 23 14 11.6781 3.2931 6.3230 24 6 8.5789 4.1268 3.8074 25 6 5.5210 2.9348 -0.1226 26 1 -0.3634 -1.0276 -0.0005 27 1 -0.3634 0.5139 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 3.9564 0.7806 -0.8892 30 1 3.9558 0.7810 0.8907 31 1 4.3076 2.6180 2.1891 32 1 3.2997 4.0331 1.6576 33 1 6.9727 3.2971 2.0832 34 1 7.1682 9.6066 4.3649 35 1 7.6922 8.5994 5.7361 36 1 8.8489 9.0276 4.4528 37 1 9.4131 7.4094 5.6571 38 1 10.6858 5.3627 6.1328 39 1 10.8739 2.5701 4.1223 40 1 9.0404 2.1414 6.3322 41 1 11.0290 3.7974 7.5598 42 1 12.4659 2.0709 6.6245 43 1 8.3506 3.2051 3.2929 44 1 5.8399 3.2768 -1.1071 45 1 6.0992 2.0845 0.2391 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17321982_12496546.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:25:20 Heat of formation + Delta-G solvation = -130.532727 kcal Electronic energy + Delta-G solvation = -28773.273553 eV Core-core repulsion = 24531.148082 eV Total energy + Delta-G solvation = -4242.125471 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.150 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -41.82966 -41.49413 -40.53063 -39.25454 -39.04163 -37.35196 -37.25629 -34.73597 -32.75361 -31.90575 -31.32061 -28.65423 -28.37677 -26.74715 -26.23826 -25.72109 -24.10989 -22.62385 -21.71108 -21.40030 -20.56850 -19.45541 -18.53169 -18.42859 -18.09551 -17.77625 -17.48182 -17.18370 -16.84946 -16.67368 -16.27633 -16.14619 -15.95851 -15.86731 -15.65713 -14.86489 -14.84068 -14.58089 -14.53675 -14.39007 -13.85356 -13.61368 -13.56469 -13.45048 -13.35703 -13.18450 -12.94017 -12.76229 -12.44654 -12.27795 -12.12093 -12.10376 -11.86871 -11.73616 -11.72853 -11.39789 -11.30343 -10.87784 -10.52564 -10.22565 -9.90531 -9.28640 -5.04285 -0.25127 0.18355 1.20009 1.27664 1.51263 1.75217 1.87781 1.89630 2.20638 2.23544 2.72649 3.26435 3.39423 3.42651 3.49901 3.58123 3.64375 3.71513 3.81331 3.90463 3.95827 4.06716 4.19384 4.19645 4.20152 4.25207 4.27523 4.33570 4.34652 4.45773 4.49492 4.57093 4.62494 4.62748 4.64340 4.74862 4.82030 4.89141 5.00695 5.06296 5.10143 5.21915 5.30490 5.46613 5.49039 5.63046 6.28978 6.31221 6.59855 6.80720 7.38250 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.363 6.363 3 C 0.458 3.542 4 O -0.503 6.503 5 C -0.102 4.102 6 C -0.099 4.099 7 H 0.107 0.893 8 C -0.147 4.147 9 C 0.126 3.874 10 H 0.118 0.882 11 N -0.721 5.721 12 C 0.562 3.438 13 O -0.515 6.515 14 C -0.175 4.175 15 C 0.193 3.807 16 O -0.279 6.279 17 C 0.019 3.981 18 C -0.214 4.214 19 C -0.047 4.047 20 C -0.168 4.168 21 C -0.068 4.068 22 O -0.530 6.530 23 Si 0.681 3.319 24 C -0.020 4.020 25 C -0.140 4.140 26 H 0.102 0.898 27 H 0.063 0.937 28 H 0.063 0.937 29 H 0.110 0.890 30 H 0.107 0.893 31 H 0.085 0.915 32 H 0.077 0.923 33 H 0.398 0.602 34 H 0.105 0.895 35 H 0.058 0.942 36 H 0.059 0.941 37 H 0.141 0.859 38 H 0.134 0.866 39 H 0.120 0.880 40 H 0.377 0.623 41 H -0.260 1.260 42 H -0.256 1.256 43 H 0.135 0.865 44 H 0.081 0.919 45 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.558 -1.818 0.889 4.987 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.301 3.699 4 O -0.390 6.390 5 C -0.140 4.140 6 C -0.118 4.118 7 H 0.126 0.874 8 C -0.186 4.186 9 C 0.022 3.978 10 H 0.136 0.864 11 N -0.373 5.373 12 C 0.349 3.651 13 O -0.390 6.390 14 C -0.179 4.179 15 C 0.144 3.856 16 O -0.189 6.189 17 C -0.076 4.076 18 C -0.233 4.233 19 C -0.065 4.065 20 C -0.168 4.168 21 C -0.178 4.178 22 O -0.337 6.337 23 Si 0.582 3.418 24 C -0.039 4.039 25 C -0.178 4.178 26 H 0.120 0.880 27 H 0.082 0.918 28 H 0.082 0.918 29 H 0.128 0.872 30 H 0.126 0.874 31 H 0.103 0.897 32 H 0.096 0.904 33 H 0.234 0.766 34 H 0.123 0.877 35 H 0.076 0.924 36 H 0.078 0.922 37 H 0.159 0.841 38 H 0.151 0.849 39 H 0.137 0.863 40 H 0.224 0.776 41 H -0.185 1.185 42 H -0.181 1.181 43 H 0.153 0.847 44 H 0.100 0.900 45 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 4.210 -1.214 0.854 4.464 hybrid contribution -0.898 -0.640 0.797 1.361 sum 3.312 -1.855 1.651 4.139 Atomic orbital electron populations 1.23294 0.76001 1.03888 1.02694 1.86506 1.23745 1.33578 1.84112 1.23833 0.92319 0.81374 0.72387 1.90697 1.67229 1.36306 1.44778 1.21411 0.87557 0.98952 1.06066 1.22283 0.96173 0.94070 0.99283 0.87439 1.23594 0.98495 1.00172 0.96313 1.22451 0.86434 0.99809 0.89137 0.86447 1.45884 1.36807 1.12176 1.42437 1.17981 0.82986 0.83412 0.80712 1.90846 1.50876 1.33252 1.64057 1.19367 1.02158 0.92785 1.03571 1.19110 0.89054 0.86380 0.91052 1.86385 1.54880 1.16311 1.61328 1.23238 1.01866 0.86080 0.96455 1.21232 0.99176 1.00471 1.02389 1.20992 0.97041 0.91719 0.96742 1.20064 1.00301 0.95934 1.00520 1.24931 0.97914 0.87575 1.07398 1.86592 1.59887 1.41323 1.45886 0.95068 0.82292 0.85323 0.79071 1.20960 0.92259 0.96151 0.94482 1.23423 0.95674 0.98553 1.00111 0.87952 0.91800 0.91779 0.87197 0.87434 0.89678 0.90410 0.76595 0.87658 0.92368 0.92225 0.84140 0.84861 0.86251 0.77559 1.18458 1.18080 0.84696 0.90002 0.89128 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.06 16 2 O -0.36 -0.56 10.57 -39.25 -0.41 -0.98 16 3 C 0.46 0.83 7.96 36.01 0.29 1.11 16 4 O -0.50 -2.48 15.51 -18.75 -0.29 -2.77 16 5 C -0.10 0.17 5.65 -27.88 -0.16 0.02 16 6 C -0.10 0.09 3.15 -89.71 -0.28 -0.19 16 7 H 0.11 0.05 7.68 -51.93 -0.40 -0.35 16 8 C -0.15 -0.05 7.45 -25.83 -0.19 -0.24 16 9 C 0.13 0.04 4.21 -67.12 -0.28 -0.24 16 10 H 0.12 0.27 7.50 -51.93 -0.39 -0.12 16 11 N -0.72 -0.29 5.31 -54.06 -0.29 -0.57 16 12 C 0.56 2.10 7.76 -12.47 -0.10 2.00 16 13 O -0.51 -3.99 14.78 -16.58 -0.25 -4.24 16 14 C -0.17 -0.38 5.89 -104.84 -0.62 -0.99 16 15 C 0.19 0.45 6.70 -38.69 -0.26 0.19 16 16 O -0.28 -1.02 8.57 -40.51 -0.35 -1.36 16 17 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 18 C -0.21 0.08 9.03 -39.48 -0.36 -0.28 16 19 C -0.05 0.06 8.66 -39.53 -0.34 -0.28 16 20 C -0.17 0.18 5.39 -104.67 -0.56 -0.38 16 21 C -0.07 0.12 2.81 36.01 0.10 0.22 16 22 O -0.53 0.22 12.76 -35.23 -0.45 -0.23 16 23 Si 0.68 -1.44 29.77 -169.99 -5.06 -6.50 16 24 C -0.02 0.01 9.09 -39.20 -0.36 -0.35 16 25 C -0.14 0.32 7.39 -25.92 -0.19 0.13 16 26 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 16 27 H 0.06 0.00 8.13 -51.93 -0.42 -0.42 16 28 H 0.06 -0.01 8.13 -51.93 -0.42 -0.43 16 29 H 0.11 -0.38 8.14 -51.93 -0.42 -0.80 16 30 H 0.11 -0.34 7.85 -51.93 -0.41 -0.75 16 31 H 0.08 -0.04 7.90 -51.93 -0.41 -0.45 16 32 H 0.08 0.19 8.14 -51.93 -0.42 -0.23 16 33 H 0.40 -0.91 6.74 -40.82 -0.28 -1.18 16 34 H 0.11 -0.17 8.14 -51.93 -0.42 -0.59 16 35 H 0.06 -0.13 7.66 -51.93 -0.40 -0.52 16 36 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 37 H 0.14 -0.36 6.30 -52.49 -0.33 -0.69 16 38 H 0.13 -0.46 4.85 -52.49 -0.25 -0.71 16 39 H 0.12 -0.32 7.96 -51.93 -0.41 -0.73 16 40 H 0.38 -1.08 8.70 45.56 0.40 -0.69 16 41 H -0.26 0.03 7.11 56.52 0.40 0.43 16 42 H -0.26 -0.36 7.11 56.52 0.40 0.04 16 43 H 0.14 -0.31 6.40 -52.49 -0.34 -0.65 16 44 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 45 H 0.09 -0.35 8.07 -51.93 -0.42 -0.77 16 LS Contribution 375.23 15.07 5.65 5.65 Total: 0.00 -10.81 375.23 -8.88 -19.70 By element: Atomic # 1 Polarization: -5.26 SS G_CDS: -6.19 Total: -11.45 kcal Atomic # 6 Polarization: 4.00 SS G_CDS: -1.25 Total: 2.75 kcal Atomic # 7 Polarization: -0.29 SS G_CDS: -0.29 Total: -0.57 kcal Atomic # 8 Polarization: -7.83 SS G_CDS: -1.75 Total: -9.58 kcal Atomic # 14 Polarization: -1.44 SS G_CDS: -5.06 Total: -6.50 kcal Total LS contribution 5.65 Total: 5.65 kcal Total: -10.81 -8.88 -19.70 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_12496546.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -110.837 kcal (2) G-P(sol) polarization free energy of solvation -10.812 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.649 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.884 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.696 kcal (6) G-S(sol) free energy of system = (1) + (5) -130.533 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds