Wall clock time and date at job start Tue Mar 9 2021 15:25:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34230 * 117.00139 * 2 1 4 4 O 1.20829 * 119.99930 * 0.02562 * 3 2 1 5 5 C 1.50706 * 120.00298 * 180.02562 * 3 2 1 6 6 C 1.53000 * 109.47176 * 180.02562 * 5 3 2 7 7 H 1.08997 * 112.84891 * 43.80330 * 6 5 3 8 8 C 1.53780 * 113.61331 * 175.00314 * 6 5 3 9 9 C 1.53777 * 87.08282 * 139.98298 * 8 6 5 10 10 H 1.08996 * 113.61853 * 89.19895 * 9 8 6 11 11 N 1.46501 * 113.61053 * 220.02075 * 9 8 6 12 12 C 1.34782 * 119.99566 * 204.99511 * 11 9 8 13 13 O 1.21274 * 120.00204 * 0.02562 * 12 11 9 14 14 C 1.50703 * 119.99714 * 179.97438 * 12 11 9 15 15 N 1.46500 * 109.46702 * 180.02562 * 14 12 11 16 16 C 1.35039 * 125.92360 * 125.00425 * 15 14 12 17 17 C 1.35086 * 107.97491 * 179.97438 * 16 15 14 18 18 C 1.50702 * 126.07560 * 180.02562 * 17 16 15 19 19 O 1.42904 * 109.47253 * 105.25768 * 18 17 16 20 20 Si 1.86306 * 109.46969 * 345.26047 * 18 17 16 21 21 C 1.40838 * 107.85362 * 0.02562 * 17 16 15 22 22 C 1.48413 * 126.04483 * 179.97438 * 21 17 16 23 23 C 1.39329 * 120.11998 * 317.15162 * 22 21 17 24 24 C 1.38014 * 119.88418 * 180.02562 * 23 22 21 25 25 C 1.38322 * 120.11917 * 359.97438 * 24 23 22 26 26 C 1.38322 * 120.24003 * 0.02665 * 25 24 23 27 27 C 1.38020 * 120.12019 * 359.97158 * 26 25 24 28 28 N 1.31628 * 107.91934 * 0.22478 * 21 17 16 29 29 C 1.53778 * 113.61348 * 272.49741 * 6 5 3 30 30 H 1.08998 * 109.47336 * 59.99250 * 1 2 3 31 31 H 1.08994 * 109.47096 * 180.02562 * 1 2 3 32 32 H 1.09004 * 109.46943 * 299.99808 * 1 2 3 33 33 H 1.08996 * 109.46733 * 60.00015 * 5 3 2 34 34 H 1.08999 * 109.46762 * 300.00481 * 5 3 2 35 35 H 1.09000 * 113.61357 * 25.42656 * 8 6 5 36 36 H 1.09002 * 113.68792 * 254.54439 * 8 6 5 37 37 H 0.96999 * 120.00240 * 24.99547 * 11 9 8 38 38 H 1.09000 * 109.46755 * 60.00472 * 14 12 11 39 39 H 1.09000 * 109.47221 * 300.00350 * 14 12 11 40 40 H 1.08002 * 126.01426 * 0.02562 * 16 15 14 41 41 H 1.08999 * 109.47581 * 225.26381 * 18 17 16 42 42 H 0.96696 * 114.00013 * 300.00311 * 19 18 17 43 43 H 1.48498 * 110.00212 * 58.67975 * 20 18 17 44 44 H 1.48501 * 109.99980 * 180.02562 * 20 18 17 45 45 H 1.08005 * 120.05301 * 0.04517 * 23 22 21 46 46 H 1.07994 * 119.94435 * 180.27698 * 24 23 22 47 47 H 1.08000 * 119.88366 * 180.02562 * 25 24 23 48 48 H 1.08003 * 119.93887 * 179.97438 * 26 25 24 49 49 H 1.08004 * 120.06410 * 179.97438 * 27 26 25 50 50 H 1.09002 * 113.61192 * 105.47328 * 29 6 5 51 51 H 1.08998 * 113.61643 * 334.56832 * 29 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5664 1.2749 -0.0006 6 6 4.0002 2.7421 0.0002 7 1 3.4253 3.3531 0.6961 8 6 5.5209 2.9348 0.1224 9 6 5.3811 4.0678 -0.9079 10 1 5.1851 5.0425 -0.4611 11 7 6.4640 4.1012 -1.8939 12 6 6.7740 5.2563 -2.5155 13 8 6.1567 6.2680 -2.2581 14 6 7.8884 5.2909 -3.5294 15 7 8.0269 6.6508 -4.0564 16 6 9.1584 7.3879 -4.0592 17 6 8.8779 8.5800 -4.6295 18 6 9.8487 9.7132 -4.8405 19 8 10.2099 9.7801 -6.2215 20 14 11.3752 9.4225 -3.8127 21 6 7.5169 8.5757 -4.9919 22 6 6.7846 9.6869 -5.6489 23 6 6.9817 11.0000 -5.2269 24 6 6.2977 12.0296 -5.8410 25 6 5.4183 11.7597 -6.8739 26 6 5.2188 10.4580 -7.2968 27 6 5.8976 9.4208 -6.6898 28 7 7.0078 7.4139 -4.6400 29 6 4.1153 3.3511 -1.4071 30 1 -0.3634 0.5139 -0.8899 31 1 -0.3633 -1.0276 0.0005 32 1 -0.3633 0.5138 0.8900 33 1 3.9557 0.7810 -0.8908 34 1 3.9564 0.7805 0.8891 35 1 6.0992 2.0845 -0.2393 36 1 5.8414 3.2766 1.1066 37 1 6.9580 3.2921 -2.0995 38 1 7.6582 4.6062 -4.3456 39 1 8.8216 4.9890 -3.0540 40 1 10.1188 7.0786 -3.6742 41 1 9.3824 10.6517 -4.5409 42 1 10.6312 8.9772 -6.5572 43 1 12.0027 8.1304 -4.1894 44 1 12.3404 10.5335 -4.0114 45 1 7.6687 11.2118 -4.4209 46 1 6.4531 13.0482 -5.5177 47 1 4.8854 12.5684 -7.3520 48 1 4.5306 10.2528 -8.1036 49 1 5.7408 8.4047 -7.0205 50 1 3.2996 4.0294 -1.6574 51 1 4.3094 2.6148 -2.1870 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17321982_12622748.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:25:25 Heat of formation + Delta-G solvation = -13.923212 kcal Electronic energy + Delta-G solvation = -34530.778679 eV Core-core repulsion = 29785.786487 eV Total energy + Delta-G solvation = -4744.992192 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.172 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -42.50090 -41.71526 -40.97133 -39.85485 -39.37089 -37.81625 -37.51579 -34.96455 -34.67951 -32.37668 -32.05400 -31.59408 -31.31290 -28.90938 -28.25406 -26.69830 -26.10862 -24.85327 -23.82009 -23.44424 -22.11513 -21.63576 -21.55753 -21.07207 -20.47940 -18.83606 -18.62147 -18.28855 -17.91463 -17.65291 -17.58762 -17.36020 -16.78164 -16.65899 -16.24359 -16.15562 -16.10675 -15.65911 -15.55972 -15.42495 -15.01421 -14.89248 -14.52523 -14.38029 -14.34429 -14.21605 -13.96811 -13.80869 -13.64583 -13.47978 -13.37169 -13.26311 -12.94073 -12.78345 -12.57114 -12.36540 -12.18602 -12.14359 -11.89253 -11.88415 -11.83304 -11.60345 -11.49307 -11.34662 -11.20471 -10.64832 -10.32286 -10.07538 -9.89476 -9.79196 -9.31898 -4.84171 0.10392 0.44745 0.80570 1.16603 1.29308 1.42062 1.49433 1.62072 1.67134 1.76143 2.03027 2.15027 2.86955 3.34695 3.43154 3.48226 3.54235 3.60238 3.70740 3.76488 3.82213 3.89259 3.94478 3.97381 4.05235 4.13405 4.18035 4.22982 4.24131 4.25604 4.30209 4.43744 4.47004 4.51924 4.55055 4.62498 4.67421 4.73840 4.76843 4.79485 4.85970 4.87421 4.96781 5.01282 5.09341 5.09862 5.25430 5.28177 5.40221 5.54087 5.55387 5.58219 5.60032 5.91803 6.01929 6.51098 6.58507 6.63381 6.70203 7.21269 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.367 6.367 3 C 0.452 3.548 4 O -0.547 6.547 5 C -0.094 4.094 6 C -0.100 4.100 7 H 0.081 0.919 8 C -0.112 4.112 9 C 0.119 3.881 10 H 0.082 0.918 11 N -0.699 5.699 12 C 0.494 3.506 13 O -0.568 6.568 14 C 0.109 3.891 15 N -0.359 5.359 16 C 0.075 3.925 17 C -0.262 4.262 18 C -0.053 4.053 19 O -0.550 6.550 20 Si 0.773 3.227 21 C 0.109 3.891 22 C -0.027 4.027 23 C -0.105 4.105 24 C -0.124 4.124 25 C -0.120 4.120 26 C -0.128 4.128 27 C -0.114 4.114 28 N -0.294 5.294 29 C -0.150 4.150 30 H 0.056 0.944 31 H 0.129 0.871 32 H 0.058 0.942 33 H 0.135 0.865 34 H 0.137 0.863 35 H 0.127 0.873 36 H 0.086 0.914 37 H 0.424 0.576 38 H 0.140 0.860 39 H 0.182 0.818 40 H 0.220 0.780 41 H 0.106 0.894 42 H 0.382 0.618 43 H -0.255 1.255 44 H -0.304 1.304 45 H 0.134 0.866 46 H 0.148 0.852 47 H 0.147 0.853 48 H 0.141 0.859 49 H 0.114 0.886 50 H 0.037 0.963 51 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.434 -9.894 3.521 12.316 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.283 6.283 3 C 0.297 3.703 4 O -0.437 6.437 5 C -0.131 4.131 6 C -0.119 4.119 7 H 0.099 0.901 8 C -0.150 4.150 9 C 0.014 3.986 10 H 0.101 0.899 11 N -0.352 5.352 12 C 0.280 3.720 13 O -0.445 6.445 14 C -0.014 4.014 15 N -0.141 5.141 16 C -0.070 4.070 17 C -0.274 4.274 18 C -0.162 4.162 19 O -0.357 6.357 20 Si 0.675 3.325 21 C -0.057 4.057 22 C -0.029 4.029 23 C -0.124 4.124 24 C -0.142 4.142 25 C -0.138 4.138 26 C -0.146 4.146 27 C -0.133 4.133 28 N -0.115 5.115 29 C -0.188 4.188 30 H 0.075 0.925 31 H 0.147 0.853 32 H 0.077 0.923 33 H 0.153 0.847 34 H 0.155 0.845 35 H 0.145 0.855 36 H 0.105 0.895 37 H 0.263 0.737 38 H 0.158 0.842 39 H 0.199 0.801 40 H 0.236 0.764 41 H 0.124 0.876 42 H 0.231 0.769 43 H -0.180 1.180 44 H -0.232 1.232 45 H 0.152 0.848 46 H 0.166 0.834 47 H 0.164 0.836 48 H 0.159 0.841 49 H 0.132 0.868 50 H 0.056 0.944 51 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges 5.314 -9.369 3.861 11.443 hybrid contribution -0.204 0.150 -1.377 1.400 sum 5.110 -9.220 2.484 10.830 Atomic orbital electron populations 1.23467 0.75437 1.05470 1.02142 1.86508 1.24488 1.33484 1.83813 1.24691 0.93838 0.80764 0.70978 1.90694 1.68456 1.37635 1.46884 1.21550 0.84699 0.98365 1.08528 1.22151 0.97591 0.94495 0.97653 0.90055 1.23339 0.94205 0.97998 0.99415 1.22352 0.86777 0.99283 0.90207 0.89937 1.45717 1.36526 1.11356 1.41645 1.21150 0.84997 0.83721 0.82174 1.90830 1.53563 1.35641 1.64492 1.22029 1.01853 0.79633 0.97895 1.48158 1.06423 1.13405 1.46071 1.22853 0.93321 0.91023 0.99794 1.20561 0.94838 0.98964 1.13000 1.24760 1.05037 0.98502 0.87897 1.86591 1.81129 1.43092 1.24921 0.94198 0.72861 0.77833 0.87596 1.20824 0.93321 0.92830 0.98694 1.17999 0.97201 0.91260 0.96423 1.21335 0.99665 0.91307 1.00131 1.21417 0.96478 0.99914 0.96405 1.21576 0.98153 0.97168 0.96913 1.21357 0.99874 0.92827 1.00513 1.21263 0.96286 0.99593 0.96147 1.77723 1.12274 1.04699 1.16830 1.23594 0.97414 1.00049 0.97779 0.92485 0.85306 0.92318 0.84732 0.84478 0.85524 0.89507 0.73736 0.84225 0.80073 0.76361 0.87630 0.76946 1.17993 1.23175 0.84837 0.83419 0.83570 0.84124 0.86753 0.94396 0.87777 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 113.37 1.20 1.17 16 2 O -0.37 -0.65 10.57 -51.41 -0.54 -1.19 16 3 C 0.45 1.20 7.96 71.24 0.57 1.76 16 4 O -0.55 -5.97 15.51 21.95 0.34 -5.63 16 5 C -0.09 0.66 5.65 29.85 0.17 0.82 16 6 C -0.10 0.39 3.15 -10.27 -0.03 0.36 16 7 H 0.08 0.13 7.68 -2.39 -0.02 0.11 16 8 C -0.11 1.08 7.39 31.12 0.23 1.31 16 9 C 0.12 -0.29 4.24 45.52 0.19 -0.10 16 10 H 0.08 0.42 7.46 -2.39 -0.02 0.41 16 11 N -0.70 4.63 5.35 -440.04 -2.36 2.27 16 12 C 0.49 0.38 7.86 87.66 0.69 1.07 16 13 O -0.57 -8.13 15.29 -3.01 -0.05 -8.18 16 14 C 0.11 -0.75 6.99 85.63 0.60 -0.15 16 15 N -0.36 -1.09 3.41 -351.90 -1.20 -2.29 16 16 C 0.08 -0.05 9.96 83.47 0.83 0.78 16 17 C -0.26 -1.28 5.35 -19.95 -0.11 -1.38 16 18 C -0.05 -0.14 2.51 71.24 0.18 0.04 16 19 O -0.55 -3.24 12.88 -148.98 -1.92 -5.16 16 20 Si 0.77 -2.25 30.80 68.60 2.11 -0.14 16 21 C 0.11 1.28 6.67 42.52 0.28 1.56 16 22 C -0.03 -0.33 5.74 -20.04 -0.12 -0.45 16 23 C -0.11 -0.96 8.89 22.48 0.20 -0.76 16 24 C -0.12 -0.76 10.03 22.24 0.22 -0.54 16 25 C -0.12 -0.68 10.04 22.31 0.22 -0.45 16 26 C -0.13 -0.98 10.03 22.24 0.22 -0.75 16 27 C -0.11 -1.32 9.78 22.48 0.22 -1.10 16 28 N -0.29 -3.78 11.66 -48.16 -0.56 -4.35 16 29 C -0.15 0.13 7.43 31.12 0.23 0.36 16 30 H 0.06 0.03 8.13 -2.39 -0.02 0.01 16 31 H 0.13 -0.85 8.14 -2.39 -0.02 -0.87 16 32 H 0.06 0.01 8.13 -2.38 -0.02 -0.01 16 33 H 0.13 -1.61 7.84 -2.39 -0.02 -1.63 16 34 H 0.14 -1.62 8.14 -2.39 -0.02 -1.64 16 35 H 0.13 -2.05 8.08 -2.39 -0.02 -2.07 16 36 H 0.09 -0.83 8.14 -2.39 -0.02 -0.85 16 37 H 0.42 -6.69 8.73 -92.71 -0.81 -7.50 16 38 H 0.14 -1.58 8.14 -2.39 -0.02 -1.59 16 39 H 0.18 -3.26 8.07 -2.39 -0.02 -3.28 16 40 H 0.22 -2.26 6.32 -2.91 -0.02 -2.28 16 41 H 0.11 0.36 5.56 -2.39 -0.01 0.35 16 42 H 0.38 -0.24 8.70 -74.06 -0.64 -0.89 16 43 H -0.25 0.89 7.00 99.48 0.70 1.59 16 44 H -0.30 -1.61 7.11 99.48 0.71 -0.91 16 45 H 0.13 0.80 6.21 -2.91 -0.02 0.78 16 46 H 0.15 0.12 8.06 -2.91 -0.02 0.10 16 47 H 0.15 0.05 8.06 -2.91 -0.02 0.02 16 48 H 0.14 0.43 8.06 -2.91 -0.02 0.41 16 49 H 0.11 1.33 8.06 -2.91 -0.02 1.30 16 50 H 0.04 0.27 8.14 -2.39 -0.02 0.25 16 51 H 0.10 -0.51 7.90 -2.39 -0.02 -0.53 16 Total: 0.00 -41.22 431.55 1.39 -39.83 By element: Atomic # 1 Polarization: -18.26 SS G_CDS: -0.44 Total: -18.70 kcal Atomic # 6 Polarization: -2.47 SS G_CDS: 6.00 Total: 3.54 kcal Atomic # 7 Polarization: -0.25 SS G_CDS: -4.12 Total: -4.36 kcal Atomic # 8 Polarization: -18.00 SS G_CDS: -2.17 Total: -20.17 kcal Atomic # 14 Polarization: -2.25 SS G_CDS: 2.11 Total: -0.14 kcal Total: -41.22 1.39 -39.83 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_12622748.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.907 kcal (2) G-P(sol) polarization free energy of solvation -41.220 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.313 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.390 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.830 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.923 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds