Wall clock time and date at job start Tue Mar 9 2021 15:25:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34231 * 116.99983 * 2 1 4 4 O 1.20822 * 120.00142 * 0.02562 * 3 2 1 5 5 C 1.50698 * 120.00053 * 180.02562 * 3 2 1 6 6 C 1.52999 * 109.47248 * 180.02562 * 5 3 2 7 7 H 1.08996 * 112.84904 * 316.19618 * 6 5 3 8 8 C 1.53789 * 113.61438 * 87.50222 * 6 5 3 9 9 C 1.53782 * 87.08138 * 139.98021 * 8 6 5 10 10 H 1.09000 * 113.68657 * 89.12466 * 9 8 6 11 11 N 1.46488 * 113.61385 * 220.01540 * 9 8 6 12 12 C 1.34779 * 120.00628 * 252.49876 * 11 9 8 13 13 O 1.21628 * 119.99439 * 0.02562 * 12 11 9 14 14 C 1.47285 * 120.00458 * 180.02562 * 12 11 9 15 15 C 1.40368 * 120.04873 * 180.02562 * 14 12 11 16 16 O 1.35682 * 120.13571 * 359.97438 * 15 14 12 17 17 C 1.38312 * 119.72957 * 179.97438 * 15 14 12 18 18 C 1.39568 * 119.81449 * 359.97438 * 17 15 14 19 19 C 1.47570 * 119.95868 * 180.02562 * 18 17 15 20 20 C 1.36102 * 125.94408 * 180.02562 * 19 18 17 21 21 C 1.40795 * 106.73362 * 179.97438 * 20 19 18 22 22 C 1.34838 * 107.04800 * 359.97438 * 21 20 19 23 23 C 1.50701 * 125.65201 * 179.97438 * 22 21 20 24 24 O 1.42899 * 109.46938 * 65.00087 * 23 22 21 25 25 Si 1.86299 * 109.47140 * 184.99925 * 23 22 21 26 26 O 1.34233 * 108.69521 * 359.73768 * 22 21 20 27 27 C 1.39961 * 120.08381 * 0.02562 * 18 17 15 28 28 C 1.36389 * 120.28153 * 359.69074 * 27 18 17 29 29 C 1.53778 * 87.08212 * 334.57025 * 9 8 6 30 30 H 1.09002 * 109.47379 * 59.99613 * 1 2 3 31 31 H 1.09001 * 109.46782 * 299.99696 * 1 2 3 32 32 H 1.09004 * 109.47085 * 179.97438 * 1 2 3 33 33 H 1.09008 * 109.47488 * 300.00148 * 5 3 2 34 34 H 1.09001 * 109.47517 * 59.99934 * 5 3 2 35 35 H 1.08999 * 113.61224 * 254.53205 * 8 6 5 36 36 H 1.09003 * 113.61275 * 25.43293 * 8 6 5 37 37 H 0.97008 * 119.99729 * 72.50274 * 11 9 8 38 38 H 0.96700 * 113.99896 * 89.99816 * 16 15 14 39 39 H 1.08000 * 120.09236 * 179.97438 * 17 15 14 40 40 H 1.08001 * 126.63210 * 0.02949 * 20 19 18 41 41 H 1.08000 * 126.47836 * 179.97438 * 21 20 19 42 42 H 1.09000 * 109.47400 * 305.00064 * 23 22 21 43 43 H 0.96702 * 114.00280 * 59.99840 * 24 23 22 44 44 H 1.48502 * 109.99750 * 58.68392 * 25 23 22 45 45 H 1.48501 * 109.99861 * 179.97438 * 25 23 22 46 46 H 1.08010 * 119.86088 * 179.97438 * 27 18 17 47 47 H 1.08002 * 119.90808 * 180.29708 * 28 27 18 48 48 H 1.09007 * 113.60786 * 270.88353 * 29 9 8 49 49 H 1.08996 * 113.69662 * 139.99496 * 29 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 6 4.0001 2.7421 0.0002 7 1 3.4247 3.3540 -0.6944 8 6 4.1165 3.3494 1.4083 9 6 5.3818 4.0666 0.9089 10 1 5.1854 5.0419 0.4635 11 7 6.4655 4.0989 1.8940 12 6 6.7761 5.2531 2.5168 13 8 6.1562 6.2678 2.2612 14 6 7.8660 5.2856 3.5069 15 6 8.1899 6.4870 4.1565 16 8 7.5008 7.6213 3.8742 17 6 9.2143 6.5099 5.0855 18 6 9.9184 5.3392 5.3712 19 6 11.0116 5.3599 6.3622 20 6 11.7748 4.2955 6.7321 21 6 12.6880 4.7665 7.6946 22 6 12.4414 6.0813 7.8635 23 6 13.1798 7.0000 8.8025 24 8 14.5398 7.1196 8.3804 25 14 12.3751 8.6802 8.7881 26 8 11.4325 6.4374 7.0529 27 6 9.5889 4.1455 4.7188 28 6 8.5756 4.1175 3.8063 29 6 5.5208 2.9350 -0.1231 30 1 -0.3634 0.5139 -0.8899 31 1 -0.3633 0.5138 0.8900 32 1 -0.3633 -1.0277 -0.0005 33 1 3.9565 0.7806 0.8892 34 1 3.9557 0.7810 -0.8908 35 1 3.3009 4.0272 1.6602 36 1 4.3112 2.6120 2.1871 37 1 6.9597 3.2894 2.0981 38 1 6.7240 7.7590 4.4334 39 1 9.4687 7.4312 5.5885 40 1 11.6958 3.2851 6.3588 41 1 13.4434 4.1847 8.2019 42 1 13.1475 6.5903 9.8121 43 1 14.6447 7.4786 7.4886 44 1 10.9515 8.5649 9.1947 45 1 13.0937 9.5954 9.7107 46 1 10.1364 3.2417 4.9424 47 1 8.3233 3.1920 3.3101 48 1 6.0994 2.0843 0.2371 49 1 5.8392 3.2769 -1.1078 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17321982_12807986.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:25:34 Heat of formation + Delta-G solvation = -117.396859 kcal Electronic energy + Delta-G solvation = -34228.047179 eV Core-core repulsion = 29283.130709 eV Total energy + Delta-G solvation = -4944.916471 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.149 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -43.76483 -41.79904 -41.40637 -40.37137 -38.97621 -38.11725 -37.81924 -37.38638 -34.91587 -34.23562 -33.38016 -31.66734 -31.27965 -30.42703 -28.47374 -27.14894 -26.82109 -25.13451 -24.14881 -23.91144 -22.48663 -22.06917 -21.66998 -21.34137 -20.70348 -19.70147 -18.78685 -18.54994 -18.47193 -17.88586 -17.68341 -17.53212 -17.47783 -17.17580 -16.59815 -16.49559 -16.24351 -15.95579 -15.93005 -15.78890 -15.38739 -14.92560 -14.87118 -14.49864 -14.39213 -14.25481 -14.04870 -13.90645 -13.89371 -13.64960 -13.62534 -13.52954 -13.42875 -12.99350 -12.88835 -12.87211 -12.75953 -12.19552 -12.13517 -11.95247 -11.82211 -11.76987 -11.47057 -11.36279 -11.15514 -10.75813 -10.74411 -10.61225 -10.05380 -9.97334 -9.04226 -5.08161 -0.80637 0.08763 0.63482 1.08921 1.22922 1.37917 1.43496 1.70378 1.72375 1.88361 1.96824 2.09886 2.61716 2.99657 3.19532 3.31792 3.33494 3.36538 3.50513 3.58887 3.66481 3.74614 3.82271 3.84357 3.88168 3.91537 4.12835 4.16065 4.18745 4.22868 4.23854 4.27906 4.35003 4.40126 4.53377 4.54711 4.59295 4.64170 4.68246 4.71773 4.76036 4.82377 4.92350 4.97319 5.01939 5.05926 5.14290 5.22057 5.35255 5.41681 5.43454 5.52869 5.93390 6.33929 6.45191 6.67785 6.76046 7.22446 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.363 6.363 3 C 0.458 3.542 4 O -0.503 6.503 5 C -0.102 4.102 6 C -0.099 4.099 7 H 0.108 0.892 8 C -0.147 4.147 9 C 0.125 3.875 10 H 0.119 0.881 11 N -0.718 5.718 12 C 0.559 3.441 13 O -0.516 6.516 14 C -0.165 4.165 15 C 0.179 3.821 16 O -0.474 6.474 17 C -0.141 4.141 18 C 0.030 3.970 19 C 0.023 3.977 20 C -0.177 4.177 21 C -0.174 4.174 22 C -0.045 4.045 23 C -0.028 4.028 24 O -0.530 6.530 25 Si 0.700 3.300 26 O -0.161 6.161 27 C -0.116 4.116 28 C -0.064 4.064 29 C -0.140 4.140 30 H 0.064 0.936 31 H 0.063 0.937 32 H 0.102 0.898 33 H 0.107 0.893 34 H 0.110 0.890 35 H 0.078 0.922 36 H 0.085 0.915 37 H 0.399 0.601 38 H 0.399 0.601 39 H 0.144 0.856 40 H 0.156 0.844 41 H 0.155 0.845 42 H 0.134 0.866 43 H 0.384 0.616 44 H -0.253 1.253 45 H -0.245 1.245 46 H 0.138 0.862 47 H 0.136 0.864 48 H 0.090 0.910 49 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.874 -6.055 -0.529 6.360 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.301 3.699 4 O -0.390 6.390 5 C -0.140 4.140 6 C -0.118 4.118 7 H 0.126 0.874 8 C -0.185 4.185 9 C 0.020 3.980 10 H 0.137 0.863 11 N -0.370 5.370 12 C 0.346 3.654 13 O -0.392 6.392 14 C -0.169 4.169 15 C 0.132 3.868 16 O -0.285 6.285 17 C -0.159 4.159 18 C 0.029 3.971 19 C -0.027 4.027 20 C -0.196 4.196 21 C -0.193 4.193 22 C -0.096 4.096 23 C -0.138 4.138 24 O -0.336 6.336 25 Si 0.600 3.400 26 O -0.058 6.058 27 C -0.134 4.134 28 C -0.083 4.083 29 C -0.178 4.178 30 H 0.082 0.918 31 H 0.082 0.918 32 H 0.121 0.879 33 H 0.125 0.875 34 H 0.128 0.872 35 H 0.096 0.904 36 H 0.104 0.896 37 H 0.235 0.765 38 H 0.258 0.742 39 H 0.162 0.838 40 H 0.174 0.826 41 H 0.173 0.827 42 H 0.151 0.849 43 H 0.232 0.768 44 H -0.177 1.177 45 H -0.169 1.169 46 H 0.156 0.844 47 H 0.154 0.846 48 H 0.109 0.891 49 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 1.175 -4.245 -0.101 4.405 hybrid contribution -0.225 -1.399 0.671 1.568 sum 0.949 -5.643 0.570 5.751 Atomic orbital electron populations 1.23300 0.75948 1.03923 1.02713 1.86504 1.23787 1.33558 1.84100 1.23823 0.92311 0.81390 0.72412 1.90698 1.67232 1.36304 1.44762 1.21408 0.87601 0.98896 1.06072 1.22255 0.96181 0.94152 0.99243 0.87387 1.23569 0.98415 1.00175 0.96385 1.22487 0.86352 0.99984 0.89158 0.86288 1.45894 1.36994 1.11368 1.42794 1.18014 0.82916 0.83528 0.80909 1.90852 1.51970 1.32924 1.63466 1.20504 1.00096 0.94265 1.02039 1.18291 0.92024 0.84916 0.91564 1.84772 1.43893 1.37767 1.62108 1.21595 0.97091 0.98790 0.98429 1.17754 0.92054 0.93957 0.93299 1.20325 0.99005 0.85253 0.98078 1.21906 0.97431 0.99772 1.00535 1.21582 1.02213 0.94125 1.01370 1.23003 0.92566 0.96328 0.97655 1.24420 0.85638 1.07528 0.96253 1.86564 1.21887 1.87405 1.37712 0.94210 0.79175 0.76745 0.89891 1.83938 1.42116 1.35750 1.44028 1.20701 0.98440 0.97182 0.97121 1.20805 0.94223 0.96972 0.96318 1.23433 0.95694 0.98518 1.00167 0.91757 0.91785 0.87925 0.87453 0.87170 0.90368 0.89642 0.76549 0.74217 0.83800 0.82625 0.82703 0.84898 0.76772 1.17698 1.16949 0.84372 0.84630 0.89133 0.89967 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.33 10.57 -39.26 -0.41 -0.75 16 3 C 0.46 0.49 7.96 36.00 0.29 0.78 16 4 O -0.50 -2.13 15.51 -18.75 -0.29 -2.43 16 5 C -0.10 0.26 5.65 -27.88 -0.16 0.11 16 6 C -0.10 0.18 3.15 -89.80 -0.28 -0.10 16 7 H 0.11 -0.03 7.68 -51.93 -0.40 -0.43 16 8 C -0.15 0.13 7.43 -25.91 -0.19 -0.06 16 9 C 0.12 -0.10 4.24 -67.13 -0.28 -0.39 16 10 H 0.12 0.16 7.46 -51.93 -0.39 -0.23 16 11 N -0.72 0.78 5.30 -54.14 -0.29 0.50 16 12 C 0.56 1.20 7.75 -12.58 -0.10 1.10 16 13 O -0.52 -3.09 14.74 -16.71 -0.25 -3.34 16 14 C -0.17 -0.13 5.89 -104.79 -0.62 -0.75 16 15 C 0.18 0.29 6.71 -38.75 -0.26 0.03 16 16 O -0.47 -1.17 11.56 -40.71 -0.47 -1.65 16 17 C -0.14 -0.10 9.65 -39.06 -0.38 -0.48 16 18 C 0.03 0.00 5.87 -104.95 -0.62 -0.61 16 19 C 0.02 0.02 7.02 -36.54 -0.26 -0.24 16 20 C -0.18 0.03 10.26 -39.38 -0.40 -0.38 16 21 C -0.17 -0.06 10.78 -39.82 -0.43 -0.48 16 22 C -0.05 -0.02 6.20 -35.51 -0.22 -0.24 16 23 C -0.03 0.02 2.98 36.01 0.11 0.13 16 24 O -0.53 0.32 12.88 -35.23 -0.45 -0.13 16 25 Si 0.70 -0.68 32.11 -169.99 -5.46 -6.13 16 26 O -0.16 -0.18 8.79 4.72 0.04 -0.14 16 27 C -0.12 0.21 9.48 -39.60 -0.38 -0.17 16 28 C -0.06 0.13 9.47 -39.62 -0.38 -0.24 16 29 C -0.14 0.45 7.39 -25.92 -0.19 0.26 16 30 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 31 H 0.06 -0.03 8.13 -51.93 -0.42 -0.46 16 32 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 33 H 0.11 -0.46 7.84 -51.92 -0.41 -0.86 16 34 H 0.11 -0.47 8.14 -51.93 -0.42 -0.89 16 35 H 0.08 0.10 8.14 -51.93 -0.42 -0.33 16 36 H 0.09 -0.17 7.90 -51.93 -0.41 -0.58 16 37 H 0.40 -1.63 6.73 -40.82 -0.27 -1.91 16 38 H 0.40 -0.46 9.06 45.56 0.41 -0.05 16 39 H 0.14 0.00 7.90 -52.49 -0.41 -0.41 16 40 H 0.16 -0.40 7.24 -52.49 -0.38 -0.78 16 41 H 0.16 -0.13 8.06 -52.49 -0.42 -0.55 16 42 H 0.13 -0.17 7.96 -51.93 -0.41 -0.58 16 43 H 0.38 -1.64 8.70 45.56 0.40 -1.24 16 44 H -0.25 -0.49 7.11 56.52 0.40 -0.09 16 45 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 46 H 0.14 -0.56 6.96 -52.48 -0.37 -0.93 16 47 H 0.14 -0.71 6.38 -52.49 -0.33 -1.05 16 48 H 0.09 -0.45 8.08 -51.93 -0.42 -0.87 16 49 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 LS Contribution 420.88 15.07 6.34 6.34 Total: 0.00 -12.00 420.88 -10.47 -22.46 By element: Atomic # 1 Polarization: -8.50 SS G_CDS: -5.55 Total: -14.05 kcal Atomic # 6 Polarization: 2.99 SS G_CDS: -3.68 Total: -0.69 kcal Atomic # 7 Polarization: 0.78 SS G_CDS: -0.29 Total: 0.50 kcal Atomic # 8 Polarization: -6.60 SS G_CDS: -1.83 Total: -8.43 kcal Atomic # 14 Polarization: -0.68 SS G_CDS: -5.46 Total: -6.13 kcal Total LS contribution 6.34 Total: 6.34 kcal Total: -12.00 -10.47 -22.46 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_12807986.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.933 kcal (2) G-P(sol) polarization free energy of solvation -11.998 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.930 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.466 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.464 kcal (6) G-S(sol) free energy of system = (1) + (5) -117.397 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds