Wall clock time and date at job start Tue Mar 9 2021 15:26:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45205 * 1 3 3 C 1.34231 * 116.99822 * 2 1 4 4 O 1.20819 * 120.00275 * 0.02562 * 3 2 1 5 5 C 1.50701 * 119.99620 * 180.02562 * 3 2 1 6 6 C 1.52998 * 109.46954 * 180.02562 * 5 3 2 7 7 H 1.08997 * 112.85474 * 43.80300 * 6 5 3 8 8 C 1.53781 * 113.61406 * 175.00066 * 6 5 3 9 9 C 1.53786 * 87.17350 * 140.02181 * 8 6 5 10 10 H 1.08993 * 113.61491 * 89.15923 * 9 8 6 11 11 N 1.46501 * 113.61366 * 220.06429 * 9 8 6 12 12 C 1.34773 * 120.00122 * 204.99908 * 11 9 8 13 13 O 1.21584 * 119.99539 * 359.97438 * 12 11 9 14 14 C 1.47600 * 120.00108 * 179.97438 * 12 11 9 15 15 C 1.39705 * 120.09019 * 359.72242 * 14 12 11 16 16 C 1.37726 * 119.91397 * 179.71646 * 15 14 12 17 17 C 1.50699 * 119.95746 * 180.29678 * 16 15 14 18 18 C 1.38975 * 120.08416 * 0.58324 * 16 15 14 19 19 O 1.35709 * 119.91229 * 179.69365 * 18 16 15 20 20 C 1.39018 * 120.17893 * 359.67735 * 18 16 15 21 21 C 1.50700 * 119.95751 * 180.02562 * 20 18 16 22 22 O 1.42897 * 109.46839 * 285.01350 * 21 20 18 23 23 Si 1.86305 * 109.46918 * 165.01858 * 21 20 18 24 24 C 1.37687 * 120.08697 * 0.03451 * 20 18 16 25 25 C 1.53782 * 113.68747 * 272.53598 * 6 5 3 26 26 H 1.08996 * 109.47402 * 59.98923 * 1 2 3 27 27 H 1.08995 * 109.46925 * 179.97438 * 1 2 3 28 28 H 1.09007 * 109.46597 * 299.99776 * 1 2 3 29 29 H 1.08995 * 109.47062 * 59.99970 * 5 3 2 30 30 H 1.09003 * 109.47062 * 300.00361 * 5 3 2 31 31 H 1.09002 * 113.61445 * 254.61180 * 8 6 5 32 32 H 1.09002 * 113.61408 * 25.42911 * 8 6 5 33 33 H 0.97002 * 119.99797 * 24.99368 * 11 9 8 34 34 H 1.07999 * 120.04457 * 0.02562 * 15 14 12 35 35 H 1.08994 * 109.47379 * 270.27998 * 17 16 15 36 36 H 1.08996 * 109.47022 * 30.28952 * 17 16 15 37 37 H 1.09006 * 109.46373 * 150.28524 * 17 16 15 38 38 H 0.96696 * 114.00269 * 269.97796 * 19 18 16 39 39 H 1.08995 * 109.47411 * 45.01507 * 21 20 18 40 40 H 0.96706 * 114.00334 * 300.00639 * 22 21 20 41 41 H 1.48496 * 110.00231 * 58.67720 * 23 21 20 42 42 H 1.48502 * 109.99789 * 179.97438 * 23 21 20 43 43 H 1.07997 * 120.04542 * 179.97438 * 24 20 18 44 44 H 1.08997 * 113.61668 * 334.55355 * 25 6 5 45 45 H 1.08994 * 113.61387 * 105.46089 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2748 -0.0006 6 6 4.0002 2.7420 0.0002 7 1 3.4253 3.3531 0.6961 8 6 5.5210 2.9347 0.1225 9 6 5.3834 4.0688 -0.9070 10 1 5.1874 5.0432 -0.4596 11 7 6.4668 4.1014 -1.8926 12 6 6.7790 5.2564 -2.5130 13 8 6.1611 6.2712 -2.2550 14 6 7.8709 5.2893 -3.5056 15 6 8.5859 4.1255 -3.7992 16 6 9.6002 4.1590 -4.7302 17 6 10.3677 2.9028 -5.0525 18 6 9.9208 5.3512 -5.3685 19 8 10.9250 5.3816 -6.2808 20 6 9.2153 6.5126 -5.0752 21 6 9.5668 7.8025 -5.7708 22 8 10.7795 8.3236 -5.2234 23 14 8.1930 9.0361 -5.5226 24 6 8.1960 6.4860 -4.1500 25 6 4.1150 3.3531 -1.4063 26 1 -0.3634 0.5140 -0.8898 27 1 -0.3633 -1.0276 -0.0005 28 1 -0.3633 0.5138 0.8901 29 1 3.9557 0.7809 -0.8908 30 1 3.9564 0.7805 0.8891 31 1 5.8401 3.2754 1.1074 32 1 6.0993 2.0845 -0.2392 33 1 6.9595 3.2916 -2.0986 34 1 8.3403 3.1997 -3.3003 35 1 11.2245 2.8189 -4.3841 36 1 9.7186 2.0370 -4.9219 37 1 10.7150 2.9442 -6.0850 38 1 11.7932 5.5790 -5.9037 39 1 9.6997 7.6162 -6.8364 40 1 10.7340 8.5133 -4.2762 41 1 7.9804 9.2748 -4.0724 42 1 8.5277 10.3128 -6.2033 43 1 7.6487 7.3888 -3.9224 44 1 4.3090 2.6179 -2.1873 45 1 3.2992 4.0316 -1.6555 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17321982_13287732.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:26:04 Heat of formation + Delta-G solvation = -144.387943 kcal Electronic energy + Delta-G solvation = -28539.020852 eV Core-core repulsion = 24296.294573 eV Total energy + Delta-G solvation = -4242.726278 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.150 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -41.86354 -41.52314 -40.72122 -39.40609 -37.94968 -37.52263 -37.37204 -34.96100 -34.03591 -32.22083 -31.19727 -28.47173 -28.11228 -26.92310 -26.83001 -25.56556 -23.79377 -22.19065 -21.79571 -21.53011 -20.60250 -19.62460 -18.78767 -18.48712 -18.13547 -17.88287 -17.53493 -17.29033 -16.76834 -16.60269 -16.14444 -16.03300 -15.96487 -15.80617 -15.28845 -14.94566 -14.75353 -14.54303 -14.45020 -14.12948 -13.90522 -13.87340 -13.65824 -13.46173 -13.33632 -13.09230 -13.00484 -12.93222 -12.76623 -12.42078 -12.21300 -11.94848 -11.77113 -11.72995 -11.66377 -11.48429 -11.36830 -10.92585 -10.59539 -10.13631 -10.02142 -9.67929 -4.92441 -0.40334 0.03557 1.22874 1.26901 1.62837 1.64077 1.70304 1.97131 2.06325 2.55374 3.06148 3.30315 3.31540 3.34858 3.45072 3.51244 3.61493 3.66615 3.72704 3.83391 3.92128 4.15245 4.16187 4.16404 4.22616 4.27532 4.28166 4.39236 4.47477 4.51032 4.53658 4.58421 4.59384 4.63562 4.67472 4.74447 4.90610 4.96943 5.01822 5.04371 5.07290 5.19290 5.24489 5.41180 5.46479 5.53238 6.33316 6.40647 6.54594 6.75978 7.15131 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.363 6.363 3 C 0.458 3.542 4 O -0.503 6.503 5 C -0.102 4.102 6 C -0.099 4.099 7 H 0.108 0.892 8 C -0.140 4.140 9 C 0.123 3.877 10 H 0.120 0.880 11 N -0.716 5.716 12 C 0.561 3.439 13 O -0.531 6.531 14 C -0.139 4.139 15 C -0.065 4.065 16 C -0.118 4.118 17 C -0.114 4.114 18 C 0.161 3.839 19 O -0.488 6.488 20 C -0.148 4.148 21 C -0.066 4.066 22 O -0.529 6.529 23 Si 0.684 3.316 24 C -0.054 4.054 25 C -0.146 4.146 26 H 0.064 0.936 27 H 0.102 0.898 28 H 0.064 0.936 29 H 0.108 0.892 30 H 0.110 0.890 31 H 0.081 0.919 32 H 0.090 0.910 33 H 0.400 0.600 34 H 0.132 0.868 35 H 0.072 0.928 36 H 0.071 0.929 37 H 0.078 0.922 38 H 0.399 0.601 39 H 0.124 0.876 40 H 0.375 0.625 41 H -0.255 1.255 42 H -0.253 1.253 43 H 0.145 0.855 44 H 0.086 0.914 45 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.905 -6.950 1.058 7.284 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.301 3.699 4 O -0.390 6.390 5 C -0.140 4.140 6 C -0.118 4.118 7 H 0.126 0.874 8 C -0.178 4.178 9 C 0.018 3.982 10 H 0.138 0.862 11 N -0.367 5.367 12 C 0.349 3.651 13 O -0.408 6.408 14 C -0.142 4.142 15 C -0.084 4.084 16 C -0.118 4.118 17 C -0.171 4.171 18 C 0.116 3.884 19 O -0.300 6.300 20 C -0.149 4.149 21 C -0.176 4.176 22 O -0.335 6.335 23 Si 0.585 3.415 24 C -0.072 4.072 25 C -0.185 4.185 26 H 0.082 0.918 27 H 0.121 0.879 28 H 0.082 0.918 29 H 0.126 0.874 30 H 0.128 0.872 31 H 0.100 0.900 32 H 0.109 0.891 33 H 0.236 0.764 34 H 0.149 0.851 35 H 0.091 0.909 36 H 0.090 0.910 37 H 0.096 0.904 38 H 0.257 0.743 39 H 0.142 0.858 40 H 0.222 0.778 41 H -0.180 1.180 42 H -0.177 1.177 43 H 0.163 0.837 44 H 0.104 0.896 45 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 0.758 -5.328 0.554 5.410 hybrid contribution 1.169 -0.400 1.045 1.618 sum 1.927 -5.727 1.599 6.251 Atomic orbital electron populations 1.23300 0.75935 1.03924 1.02719 1.86506 1.23795 1.33545 1.84096 1.23813 0.92298 0.81398 0.72421 1.90697 1.67227 1.36303 1.44755 1.21402 0.87636 0.98865 1.06075 1.22247 0.96113 0.94170 0.99285 0.87389 1.23431 0.95768 0.98472 1.00118 1.22548 0.86414 1.00013 0.89176 0.86250 1.45876 1.36919 1.11317 1.42598 1.18186 0.82833 0.83467 0.80604 1.90817 1.52597 1.33364 1.64039 1.19819 0.99044 0.94628 1.00708 1.21095 0.93980 0.97278 0.96076 1.20210 0.98648 0.96109 0.96882 1.20735 0.99655 0.93528 1.03183 1.18304 0.90690 0.90926 0.88493 1.84659 1.18777 1.93098 1.33418 1.20573 0.98700 0.96249 0.99357 1.24898 0.95541 0.96015 1.01170 1.86611 1.33563 1.84865 1.28433 0.94666 0.84203 0.79521 0.83120 1.21170 0.94757 0.98172 0.93114 1.23597 0.98337 1.00184 0.96397 0.91770 0.87926 0.91763 0.87429 0.87191 0.89994 0.89121 0.76407 0.85056 0.90899 0.91043 0.90351 0.74315 0.85823 0.77754 1.17955 1.17749 0.83746 0.89581 0.90258 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.31 10.57 -39.26 -0.41 -0.73 16 3 C 0.46 0.46 7.96 36.01 0.29 0.75 16 4 O -0.50 -2.10 15.51 -18.74 -0.29 -2.39 16 5 C -0.10 0.27 5.65 -27.88 -0.16 0.11 16 6 C -0.10 0.19 3.15 -89.81 -0.28 -0.09 16 7 H 0.11 -0.05 7.68 -51.93 -0.40 -0.45 16 8 C -0.14 0.48 7.39 -25.92 -0.19 0.29 16 9 C 0.12 -0.12 4.25 -67.02 -0.28 -0.41 16 10 H 0.12 0.12 7.46 -51.93 -0.39 -0.27 16 11 N -0.72 0.85 5.31 -53.94 -0.29 0.57 16 12 C 0.56 1.12 7.76 -12.44 -0.10 1.02 16 13 O -0.53 -3.13 15.94 5.29 0.08 -3.04 16 14 C -0.14 -0.10 5.87 -104.96 -0.62 -0.72 16 15 C -0.07 0.09 9.18 -39.22 -0.36 -0.27 16 16 C -0.12 0.10 5.89 -104.54 -0.62 -0.51 16 17 C -0.11 0.29 9.78 36.00 0.35 0.65 16 18 C 0.16 0.04 6.66 -39.02 -0.26 -0.22 16 19 O -0.49 0.09 11.84 -18.83 -0.22 -0.13 16 20 C -0.15 -0.08 5.27 -104.53 -0.55 -0.63 16 21 C -0.07 -0.02 2.37 36.01 0.09 0.06 16 22 O -0.53 -0.43 12.88 -35.23 -0.45 -0.89 16 23 Si 0.68 0.27 30.24 -169.99 -5.14 -4.87 16 24 C -0.05 -0.07 8.20 -39.21 -0.32 -0.39 16 25 C -0.15 0.14 7.44 -25.82 -0.19 -0.05 16 26 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 27 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 28 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 29 H 0.11 -0.46 7.85 -51.93 -0.41 -0.87 16 30 H 0.11 -0.47 8.14 -51.93 -0.42 -0.90 16 31 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 32 H 0.09 -0.47 8.08 -51.93 -0.42 -0.89 16 33 H 0.40 -1.63 6.75 -40.82 -0.28 -1.91 16 34 H 0.13 -0.58 6.39 -52.49 -0.34 -0.91 16 35 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 36 H 0.07 -0.26 8.08 -51.93 -0.42 -0.68 16 37 H 0.08 -0.14 7.52 -51.93 -0.39 -0.53 16 38 H 0.40 -1.37 9.06 45.56 0.41 -0.96 16 39 H 0.12 0.04 7.82 -51.93 -0.41 -0.36 16 40 H 0.37 -0.70 8.70 45.56 0.40 -0.31 16 41 H -0.25 -0.67 6.68 56.52 0.38 -0.29 16 42 H -0.25 -0.81 7.11 56.52 0.40 -0.41 16 43 H 0.15 0.27 4.43 -52.49 -0.23 0.04 16 44 H 0.09 -0.17 7.90 -51.93 -0.41 -0.58 16 45 H 0.08 0.09 8.14 -51.93 -0.42 -0.33 16 LS Contribution 378.16 15.07 5.70 5.70 Total: 0.00 -10.15 378.16 -8.62 -18.76 By element: Atomic # 1 Polarization: -8.16 SS G_CDS: -5.45 Total: -13.62 kcal Atomic # 6 Polarization: 2.77 SS G_CDS: -2.14 Total: 0.63 kcal Atomic # 7 Polarization: 0.85 SS G_CDS: -0.29 Total: 0.57 kcal Atomic # 8 Polarization: -5.88 SS G_CDS: -1.30 Total: -7.17 kcal Atomic # 14 Polarization: 0.27 SS G_CDS: -5.14 Total: -4.87 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -10.15 -8.62 -18.76 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_13287732.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -125.624 kcal (2) G-P(sol) polarization free energy of solvation -10.145 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -135.769 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.619 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.764 kcal (6) G-S(sol) free energy of system = (1) + (5) -144.388 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds