Wall clock time and date at job start Tue Mar 9 2021 15:26:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45192 * 1 3 3 C 1.34230 * 117.00018 * 2 1 4 4 O 1.20826 * 120.00015 * 359.97438 * 3 2 1 5 5 C 1.50701 * 120.00046 * 180.02562 * 3 2 1 6 6 C 1.52997 * 109.47212 * 179.97438 * 5 3 2 7 7 H 1.09003 * 112.84890 * 316.19484 * 6 5 3 8 8 C 1.53787 * 113.61418 * 87.49916 * 6 5 3 9 9 C 1.53789 * 87.07916 * 139.98375 * 8 6 5 10 10 H 1.09004 * 113.68906 * 89.12857 * 9 8 6 11 11 N 1.46494 * 113.61168 * 220.02104 * 9 8 6 12 12 C 1.34781 * 120.00001 * 252.49918 * 11 9 8 13 13 O 1.21614 * 119.99523 * 359.97438 * 12 11 9 14 14 C 1.47380 * 120.00178 * 180.02562 * 12 11 9 15 15 C 1.36413 * 127.19124 * 0.02562 * 14 12 11 16 16 O 1.33646 * 108.39687 * 179.97438 * 15 14 12 17 17 C 1.34211 * 110.90864 * 0.02562 * 16 15 14 18 18 C 1.50703 * 125.43775 * 179.97438 * 17 16 15 19 19 O 1.42902 * 109.47227 * 120.02139 * 18 17 16 20 20 Si 1.86301 * 109.47073 * 0.02564 * 18 17 16 21 21 C 1.34175 * 109.12695 * 359.74687 * 17 16 15 22 22 C 1.53780 * 113.61900 * 184.99929 * 6 5 3 23 23 H 1.08998 * 109.47321 * 60.00129 * 1 2 3 24 24 H 1.09002 * 109.47011 * 180.02562 * 1 2 3 25 25 H 1.09001 * 109.47630 * 300.00318 * 1 2 3 26 26 H 1.09002 * 109.47060 * 299.99765 * 5 3 2 27 27 H 1.09001 * 109.47380 * 59.99853 * 5 3 2 28 28 H 1.08998 * 113.61477 * 254.53206 * 8 6 5 29 29 H 1.08992 * 113.61461 * 25.43734 * 8 6 5 30 30 H 0.97000 * 120.00215 * 72.49761 * 11 9 8 31 31 H 1.08003 * 125.80268 * 359.96347 * 15 14 12 32 32 H 1.08996 * 109.47128 * 240.02536 * 18 17 16 33 33 H 0.96700 * 114.00529 * 179.97438 * 19 18 17 34 34 H 1.48501 * 109.99957 * 298.67704 * 20 18 17 35 35 H 1.48497 * 110.00223 * 59.99800 * 20 18 17 36 36 H 1.08002 * 127.02840 * 180.26663 * 21 17 16 37 37 H 1.09004 * 113.61169 * 334.56803 * 22 6 5 38 38 H 1.09003 * 113.61760 * 105.46589 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2749 -0.0006 6 6 4.0001 2.7421 -0.0011 7 1 3.4246 3.3533 -0.6964 8 6 4.1163 3.3506 1.4065 9 6 5.3817 4.0674 0.9064 10 1 5.1853 5.0424 0.4602 11 7 6.4654 4.1005 1.8916 12 6 6.7758 5.2553 2.5134 13 8 6.1566 6.2699 2.2562 14 6 7.8664 5.2888 3.5041 15 6 8.6522 4.2467 3.9010 16 8 9.5192 4.6959 4.8135 17 6 9.3391 6.0062 5.0412 18 6 10.1371 6.8429 6.0077 19 8 10.7858 7.9008 5.2991 20 14 11.4178 5.7772 6.8412 21 6 8.3383 6.4534 4.2674 22 6 5.5207 2.9349 -0.1245 23 1 -0.3634 0.5138 -0.8900 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3634 0.5139 0.8899 26 1 3.9563 0.7806 0.8892 27 1 3.9557 0.7809 -0.8908 28 1 3.3008 4.0287 1.6577 29 1 4.3110 2.6140 2.1859 30 1 6.9595 3.2913 2.0965 31 1 8.5850 3.2312 3.5394 32 1 9.4702 7.2647 6.7597 33 1 11.3184 8.4812 5.8598 34 1 10.7546 4.6920 7.6079 35 1 12.3333 5.1960 5.8267 36 1 7.9563 7.4623 4.2168 37 1 6.0994 2.0845 0.2364 38 1 5.8390 3.2773 -1.1092 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17321982_13456056.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:26:34 Heat of formation + Delta-G solvation = -105.431425 kcal Electronic energy + Delta-G solvation = -22970.833495 eV Core-core repulsion = 19169.097877 eV Total energy + Delta-G solvation = -3801.735618 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.118 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -43.74446 -41.67600 -40.84743 -39.26741 -37.98175 -37.39650 -34.90521 -33.87450 -32.16554 -31.34673 -28.48656 -26.82920 -26.77589 -25.64790 -23.71158 -22.21314 -21.77157 -21.23701 -20.35885 -18.98630 -18.70588 -18.52506 -17.84022 -17.52891 -17.38083 -17.15906 -16.92788 -16.23711 -15.97982 -15.85547 -15.70697 -14.88929 -14.85647 -14.50198 -14.19520 -14.11881 -13.87084 -13.71410 -13.65897 -13.44960 -13.00481 -12.88252 -12.72119 -12.20773 -12.10699 -11.94896 -11.77120 -11.47721 -11.36691 -10.98658 -10.87834 -10.58218 -10.08381 -9.78153 -5.14243 0.20402 0.87110 1.10397 1.22858 1.51722 1.63813 1.70194 1.95927 2.08209 2.34331 3.20158 3.31901 3.35909 3.51044 3.56577 3.63078 3.72261 3.83688 3.85414 4.13848 4.16175 4.19492 4.22739 4.27573 4.37170 4.39602 4.53747 4.59129 4.59200 4.67333 4.73136 4.79575 4.91471 5.02157 5.19853 5.22659 5.41679 5.50823 5.82637 6.42570 6.44208 6.76010 7.20887 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.363 6.363 3 C 0.458 3.542 4 O -0.503 6.503 5 C -0.102 4.102 6 C -0.099 4.099 7 H 0.108 0.892 8 C -0.147 4.147 9 C 0.125 3.875 10 H 0.120 0.880 11 N -0.718 5.718 12 C 0.589 3.411 13 O -0.528 6.528 14 C -0.235 4.235 15 C 0.029 3.971 16 O -0.174 6.174 17 C -0.017 4.017 18 C -0.036 4.036 19 O -0.543 6.543 20 Si 0.712 3.288 21 C -0.117 4.117 22 C -0.140 4.140 23 H 0.064 0.936 24 H 0.102 0.898 25 H 0.063 0.937 26 H 0.107 0.893 27 H 0.110 0.890 28 H 0.078 0.922 29 H 0.085 0.915 30 H 0.398 0.602 31 H 0.214 0.786 32 H 0.095 0.905 33 H 0.391 0.609 34 H -0.252 1.252 35 H -0.250 1.250 36 H 0.164 0.836 37 H 0.090 0.910 38 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.648 -4.201 2.782 6.220 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.301 3.699 4 O -0.390 6.390 5 C -0.140 4.140 6 C -0.118 4.118 7 H 0.127 0.873 8 C -0.186 4.186 9 C 0.020 3.980 10 H 0.138 0.862 11 N -0.369 5.369 12 C 0.377 3.623 13 O -0.405 6.405 14 C -0.240 4.240 15 C -0.041 4.041 16 O -0.070 6.070 17 C -0.065 4.065 18 C -0.146 4.146 19 O -0.350 6.350 20 Si 0.612 3.388 21 C -0.136 4.136 22 C -0.178 4.178 23 H 0.083 0.917 24 H 0.121 0.879 25 H 0.082 0.918 26 H 0.125 0.875 27 H 0.128 0.872 28 H 0.097 0.903 29 H 0.104 0.896 30 H 0.232 0.768 31 H 0.230 0.770 32 H 0.113 0.887 33 H 0.241 0.759 34 H -0.177 1.177 35 H -0.174 1.174 36 H 0.182 0.818 37 H 0.109 0.891 38 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 3.223 -4.390 2.313 5.916 hybrid contribution -0.749 -0.346 -0.361 0.901 sum 2.473 -4.736 1.952 5.688 Atomic orbital electron populations 1.23299 0.75940 1.03924 1.02720 1.86502 1.23795 1.33547 1.84100 1.23816 0.92298 0.81398 0.72424 1.90700 1.67224 1.36302 1.44747 1.21404 0.87632 0.98868 1.06065 1.22253 0.96139 0.94174 0.99233 0.87342 1.23573 0.98410 1.00180 0.96404 1.22515 0.86303 1.00059 0.89112 0.86227 1.45806 1.37144 1.11043 1.42917 1.17272 0.81842 0.83402 0.79774 1.90822 1.52325 1.33402 1.63945 1.21547 1.02518 0.94873 1.05022 1.24456 0.89927 0.99336 0.90358 1.83690 1.49804 1.24461 1.49070 1.21165 1.00247 0.81646 1.03399 1.23800 1.02307 0.94076 0.94379 1.86463 1.67756 1.42822 1.37997 0.95116 0.80681 0.80513 0.82539 1.22508 0.96246 0.99348 0.95528 1.23436 0.95746 0.98447 1.00142 0.91749 0.87921 0.91786 0.87462 0.87167 0.90294 0.89620 0.76769 0.76954 0.88692 0.75938 1.17688 1.17411 0.81806 0.89123 0.89928 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.43 10.56 -39.26 -0.41 -0.85 16 3 C 0.46 0.64 7.96 36.01 0.29 0.92 16 4 O -0.50 -2.30 15.51 -18.75 -0.29 -2.59 16 5 C -0.10 0.23 5.65 -27.88 -0.16 0.07 16 6 C -0.10 0.14 3.15 -89.81 -0.28 -0.14 16 7 H 0.11 0.01 7.68 -51.93 -0.40 -0.39 16 8 C -0.15 0.05 7.43 -25.91 -0.19 -0.14 16 9 C 0.12 -0.02 4.24 -67.12 -0.28 -0.31 16 10 H 0.12 0.23 7.46 -51.93 -0.39 -0.15 16 11 N -0.72 0.23 5.35 -54.10 -0.29 -0.06 16 12 C 0.59 2.09 7.81 -12.54 -0.10 1.99 16 13 O -0.53 -4.12 16.58 5.26 0.09 -4.03 16 14 C -0.24 -0.62 6.31 -103.28 -0.65 -1.27 16 15 C 0.03 0.00 11.61 30.07 0.35 0.35 16 16 O -0.17 -0.40 8.89 7.68 0.07 -0.33 16 17 C -0.02 -0.04 6.24 -35.74 -0.22 -0.27 16 18 C -0.04 0.02 2.97 36.01 0.11 0.12 16 19 O -0.54 0.16 12.84 -35.23 -0.45 -0.29 16 20 Si 0.71 -1.09 32.09 -169.99 -5.45 -6.54 16 21 C -0.12 -0.42 10.87 -37.46 -0.41 -0.83 16 22 C -0.14 0.40 7.39 -25.92 -0.19 0.20 16 23 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 24 H 0.10 -0.29 8.14 -51.93 -0.42 -0.71 16 25 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 26 H 0.11 -0.42 7.85 -51.93 -0.41 -0.82 16 27 H 0.11 -0.43 8.14 -51.93 -0.42 -0.86 16 28 H 0.08 0.15 8.14 -51.93 -0.42 -0.28 16 29 H 0.09 -0.12 7.90 -51.93 -0.41 -0.53 16 30 H 0.40 -1.48 7.70 -40.82 -0.31 -1.79 16 31 H 0.21 -1.07 7.47 -52.48 -0.39 -1.46 16 32 H 0.10 -0.26 7.96 -51.93 -0.41 -0.67 16 33 H 0.39 -2.29 8.74 45.56 0.40 -1.90 16 34 H -0.25 -0.31 7.11 56.52 0.40 0.10 16 35 H -0.25 -0.55 7.11 56.52 0.40 -0.15 16 36 H 0.16 0.59 8.06 -52.49 -0.42 0.17 16 37 H 0.09 -0.42 8.08 -51.93 -0.42 -0.84 16 38 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 LS Contribution 335.94 15.07 5.06 5.06 Total: 0.00 -12.45 335.94 -7.26 -19.71 By element: Atomic # 1 Polarization: -6.94 SS G_CDS: -4.90 Total: -11.84 kcal Atomic # 6 Polarization: 2.43 SS G_CDS: -0.68 Total: 1.75 kcal Atomic # 7 Polarization: 0.23 SS G_CDS: -0.29 Total: -0.06 kcal Atomic # 8 Polarization: -7.08 SS G_CDS: -1.00 Total: -8.09 kcal Atomic # 14 Polarization: -1.09 SS G_CDS: -5.45 Total: -6.54 kcal Total LS contribution 5.06 Total: 5.06 kcal Total: -12.45 -7.26 -19.71 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_13456056.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -85.719 kcal (2) G-P(sol) polarization free energy of solvation -12.448 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -98.168 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.264 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.712 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.431 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds