Wall clock time and date at job start Tue Mar 9 2021 15:26:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45192 * 1 3 3 C 1.34230 * 117.00018 * 2 1 4 4 O 1.20826 * 120.00015 * 359.97438 * 3 2 1 5 5 C 1.50701 * 120.00046 * 180.02562 * 3 2 1 6 6 C 1.52997 * 109.47212 * 179.97438 * 5 3 2 7 7 H 1.09003 * 112.84890 * 316.19484 * 6 5 3 8 8 C 1.53787 * 113.61418 * 87.49916 * 6 5 3 9 9 C 1.53789 * 87.07916 * 139.98375 * 8 6 5 10 10 H 1.09004 * 113.68906 * 89.12857 * 9 8 6 11 11 N 1.46494 * 113.61168 * 220.02104 * 9 8 6 12 12 C 1.34781 * 120.00001 * 252.49918 * 11 9 8 13 13 O 1.21614 * 119.99523 * 359.97438 * 12 11 9 14 14 C 1.47380 * 120.00178 * 180.02562 * 12 11 9 15 15 C 1.36413 * 127.19124 * 0.02562 * 14 12 11 16 16 O 1.33646 * 108.39687 * 179.97438 * 15 14 12 17 17 C 1.34211 * 110.90864 * 0.02562 * 16 15 14 18 18 C 1.50703 * 125.43775 * 179.97438 * 17 16 15 19 19 O 1.42902 * 109.47227 * 120.02139 * 18 17 16 20 20 Si 1.86301 * 109.47073 * 0.02564 * 18 17 16 21 21 C 1.34175 * 109.12695 * 359.74687 * 17 16 15 22 22 C 1.53780 * 113.61900 * 184.99929 * 6 5 3 23 23 H 1.08998 * 109.47321 * 60.00129 * 1 2 3 24 24 H 1.09002 * 109.47011 * 180.02562 * 1 2 3 25 25 H 1.09001 * 109.47630 * 300.00318 * 1 2 3 26 26 H 1.09002 * 109.47060 * 299.99765 * 5 3 2 27 27 H 1.09001 * 109.47380 * 59.99853 * 5 3 2 28 28 H 1.08998 * 113.61477 * 254.53206 * 8 6 5 29 29 H 1.08992 * 113.61461 * 25.43734 * 8 6 5 30 30 H 0.97000 * 120.00215 * 72.49761 * 11 9 8 31 31 H 1.08003 * 125.80268 * 359.96347 * 15 14 12 32 32 H 1.08996 * 109.47128 * 240.02536 * 18 17 16 33 33 H 0.96700 * 114.00529 * 179.97438 * 19 18 17 34 34 H 1.48501 * 109.99957 * 298.67704 * 20 18 17 35 35 H 1.48497 * 110.00223 * 59.99800 * 20 18 17 36 36 H 1.08002 * 127.02840 * 180.26663 * 21 17 16 37 37 H 1.09004 * 113.61169 * 334.56803 * 22 6 5 38 38 H 1.09003 * 113.61760 * 105.46589 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2749 -0.0006 6 6 4.0001 2.7421 -0.0011 7 1 3.4246 3.3533 -0.6964 8 6 4.1163 3.3506 1.4065 9 6 5.3817 4.0674 0.9064 10 1 5.1853 5.0424 0.4602 11 7 6.4654 4.1005 1.8916 12 6 6.7758 5.2553 2.5134 13 8 6.1566 6.2699 2.2562 14 6 7.8664 5.2888 3.5041 15 6 8.6522 4.2467 3.9010 16 8 9.5192 4.6959 4.8135 17 6 9.3391 6.0062 5.0412 18 6 10.1371 6.8429 6.0077 19 8 10.7858 7.9008 5.2991 20 14 11.4178 5.7772 6.8412 21 6 8.3383 6.4534 4.2674 22 6 5.5207 2.9349 -0.1245 23 1 -0.3634 0.5138 -0.8900 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3634 0.5139 0.8899 26 1 3.9563 0.7806 0.8892 27 1 3.9557 0.7809 -0.8908 28 1 3.3008 4.0287 1.6577 29 1 4.3110 2.6140 2.1859 30 1 6.9595 3.2913 2.0965 31 1 8.5850 3.2312 3.5394 32 1 9.4702 7.2647 6.7597 33 1 11.3184 8.4812 5.8598 34 1 10.7546 4.6920 7.6079 35 1 12.3333 5.1960 5.8267 36 1 7.9563 7.4623 4.2168 37 1 6.0994 2.0845 0.2364 38 1 5.8390 3.2773 -1.1092 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17321982_13456056.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:26:34 Heat of formation + Delta-G solvation = -110.207885 kcal Electronic energy + Delta-G solvation = -22971.040618 eV Core-core repulsion = 19169.097877 eV Total energy + Delta-G solvation = -3801.942741 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.118 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -43.86245 -41.73112 -40.97265 -39.39001 -37.90865 -37.51813 -35.08411 -33.99756 -32.19467 -31.32391 -28.45804 -26.78712 -26.72786 -25.72642 -23.77096 -22.37097 -21.80507 -21.31208 -20.33666 -19.01227 -18.65595 -18.58066 -17.89019 -17.58982 -17.51882 -17.27001 -16.97014 -16.24137 -16.01598 -15.92709 -15.76761 -14.95998 -14.86435 -14.52049 -14.30807 -14.21144 -13.94265 -13.79370 -13.51303 -13.39333 -12.95493 -12.84851 -12.71373 -12.20610 -12.16220 -11.90361 -11.83674 -11.50954 -11.37432 -11.23894 -11.08204 -10.52569 -10.18129 -9.84525 -5.02925 0.12626 0.70111 1.16544 1.18866 1.51140 1.70111 1.74431 2.01403 2.02152 2.14070 3.28811 3.39480 3.40895 3.46379 3.67819 3.72876 3.78397 3.85222 3.88454 4.17299 4.24548 4.26100 4.30034 4.37064 4.42415 4.45836 4.61108 4.67274 4.71273 4.75497 4.79447 4.83668 4.97495 5.03639 5.06750 5.20186 5.39281 5.53674 5.71161 6.41460 6.70133 6.81837 7.07978 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.367 6.367 3 C 0.453 3.547 4 O -0.545 6.545 5 C -0.095 4.095 6 C -0.097 4.097 7 H 0.085 0.915 8 C -0.147 4.147 9 C 0.114 3.886 10 H 0.088 0.912 11 N -0.696 5.696 12 C 0.586 3.414 13 O -0.586 6.586 14 C -0.265 4.265 15 C 0.059 3.941 16 O -0.184 6.184 17 C -0.028 4.028 18 C -0.050 4.050 19 O -0.564 6.564 20 Si 0.820 3.180 21 C -0.147 4.147 22 C -0.115 4.115 23 H 0.058 0.942 24 H 0.128 0.872 25 H 0.057 0.943 26 H 0.135 0.865 27 H 0.137 0.863 28 H 0.045 0.955 29 H 0.105 0.895 30 H 0.418 0.582 31 H 0.266 0.734 32 H 0.118 0.882 33 H 0.414 0.586 34 H -0.287 1.287 35 H -0.301 1.301 36 H 0.150 0.850 37 H 0.125 0.875 38 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.194 -6.671 3.154 9.024 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.283 6.283 3 C 0.298 3.702 4 O -0.435 6.435 5 C -0.132 4.132 6 C -0.116 4.116 7 H 0.103 0.897 8 C -0.186 4.186 9 C 0.009 3.991 10 H 0.106 0.894 11 N -0.347 5.347 12 C 0.375 3.625 13 O -0.468 6.468 14 C -0.269 4.269 15 C -0.011 4.011 16 O -0.081 6.081 17 C -0.076 4.076 18 C -0.158 4.158 19 O -0.376 6.376 20 Si 0.724 3.276 21 C -0.167 4.167 22 C -0.153 4.153 23 H 0.077 0.923 24 H 0.146 0.854 25 H 0.076 0.924 26 H 0.153 0.847 27 H 0.155 0.845 28 H 0.064 0.936 29 H 0.123 0.877 30 H 0.257 0.743 31 H 0.282 0.718 32 H 0.135 0.865 33 H 0.267 0.733 34 H -0.214 1.214 35 H -0.229 1.229 36 H 0.168 0.832 37 H 0.143 0.857 38 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges 4.783 -6.879 2.697 8.801 hybrid contribution -1.268 0.385 -0.500 1.416 sum 3.515 -6.494 2.197 7.704 Atomic orbital electron populations 1.23468 0.75406 1.05456 1.02182 1.86507 1.24512 1.33469 1.83814 1.24632 0.93740 0.80788 0.71008 1.90691 1.68410 1.37588 1.46846 1.21539 0.84856 0.98263 1.08533 1.22136 0.97160 0.94642 0.97678 0.89669 1.23599 0.97102 1.00075 0.97830 1.22519 0.86681 0.99801 0.90124 0.89394 1.45629 1.36629 1.10731 1.41721 1.17512 0.81591 0.83577 0.79786 1.90788 1.54433 1.35580 1.65961 1.21544 1.03644 0.95691 1.06048 1.25369 0.87329 1.00455 0.87934 1.83726 1.50325 1.24392 1.49622 1.21696 1.00265 0.82022 1.03617 1.24166 1.03226 0.94442 0.93965 1.86412 1.68362 1.43344 1.39460 0.93944 0.76863 0.77817 0.79020 1.22595 0.97486 0.99513 0.97089 1.23373 0.94681 0.97878 0.99359 0.92297 0.85358 0.92413 0.84735 0.84527 0.93611 0.87691 0.74325 0.71829 0.86459 0.73307 1.21416 1.22912 0.83231 0.85683 0.89476 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 113.37 1.20 1.18 16 2 O -0.37 -0.71 10.56 -51.41 -0.54 -1.25 16 3 C 0.45 1.27 7.96 71.24 0.57 1.83 16 4 O -0.55 -5.89 15.51 21.97 0.34 -5.55 16 5 C -0.09 0.60 5.65 29.85 0.17 0.77 16 6 C -0.10 0.30 3.15 -10.27 -0.03 0.27 16 7 H 0.08 0.16 7.68 -2.39 -0.02 0.14 16 8 C -0.15 0.00 7.43 31.13 0.23 0.23 16 9 C 0.11 0.02 4.24 45.52 0.19 0.22 16 10 H 0.09 0.61 7.46 -2.38 -0.02 0.59 16 11 N -0.70 0.71 5.35 -443.33 -2.37 -1.66 16 12 C 0.59 5.03 7.81 86.65 0.68 5.70 16 13 O -0.59 -11.20 16.58 -4.08 -0.07 -11.27 16 14 C -0.26 -1.60 6.31 -18.99 -0.12 -1.72 16 15 C 0.06 -0.08 11.61 67.39 0.78 0.70 16 16 O -0.18 -0.75 8.89 4.56 0.04 -0.71 16 17 C -0.03 -0.17 6.24 24.76 0.15 -0.01 16 18 C -0.05 0.05 2.97 71.24 0.21 0.26 16 19 O -0.56 0.26 12.84 -148.98 -1.91 -1.65 16 20 Si 0.82 -2.83 32.09 68.60 2.20 -0.63 16 21 C -0.15 -1.36 10.87 23.65 0.26 -1.10 16 22 C -0.12 0.86 7.39 31.12 0.23 1.09 16 23 H 0.06 0.02 8.13 -2.39 -0.02 0.00 16 24 H 0.13 -0.83 8.14 -2.39 -0.02 -0.85 16 25 H 0.06 0.02 8.13 -2.39 -0.02 0.00 16 26 H 0.13 -1.52 7.85 -2.39 -0.02 -1.54 16 27 H 0.14 -1.51 8.14 -2.39 -0.02 -1.53 16 28 H 0.04 0.31 8.14 -2.39 -0.02 0.29 16 29 H 0.10 -0.43 7.90 -2.39 -0.02 -0.45 16 30 H 0.42 -4.19 7.70 -92.71 -0.71 -4.90 16 31 H 0.27 -3.69 7.47 -2.91 -0.02 -3.71 16 32 H 0.12 -0.69 7.96 -2.39 -0.02 -0.71 16 33 H 0.41 -5.07 8.74 -74.06 -0.65 -5.72 16 34 H -0.29 -0.62 7.11 99.48 0.71 0.09 16 35 H -0.30 -1.52 7.11 99.48 0.71 -0.81 16 36 H 0.15 1.63 8.06 -2.91 -0.02 1.60 16 37 H 0.13 -1.73 8.08 -2.38 -0.02 -1.75 16 38 H 0.09 -0.64 8.14 -2.39 -0.02 -0.66 16 Total: 0.00 -35.19 335.94 1.98 -33.20 By element: Atomic # 1 Polarization: -19.69 SS G_CDS: -0.22 Total: -19.91 kcal Atomic # 6 Polarization: 4.91 SS G_CDS: 4.52 Total: 9.43 kcal Atomic # 7 Polarization: 0.71 SS G_CDS: -2.37 Total: -1.66 kcal Atomic # 8 Polarization: -18.28 SS G_CDS: -2.14 Total: -20.42 kcal Atomic # 14 Polarization: -2.83 SS G_CDS: 2.20 Total: -0.63 kcal Total: -35.19 1.98 -33.20 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_13456056.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.004 kcal (2) G-P(sol) polarization free energy of solvation -35.188 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -112.192 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.984 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.204 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.208 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds