Wall clock time and date at job start Tue Mar 9 2021 15:26:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45195 * 1 3 3 C 1.34232 * 116.99978 * 2 1 4 4 O 1.20825 * 119.99778 * 359.97438 * 3 2 1 5 5 C 1.50696 * 120.00182 * 179.97438 * 3 2 1 6 6 C 1.53000 * 109.47117 * 179.97438 * 5 3 2 7 7 H 1.09002 * 112.84949 * 45.33376 * 6 5 3 8 8 C 1.53781 * 113.61707 * 176.52936 * 6 5 3 9 9 C 1.53777 * 87.08336 * 140.06298 * 8 6 5 10 10 H 1.09008 * 113.61204 * 89.11878 * 9 8 6 11 11 N 1.46492 * 113.61596 * 219.93501 * 9 8 6 12 12 C 1.34774 * 120.00245 * 205.00267 * 11 9 8 13 13 O 1.21287 * 119.99850 * 0.02562 * 12 11 9 14 14 C 1.50702 * 120.00455 * 179.97438 * 12 11 9 15 15 C 1.50698 * 109.47502 * 180.02562 * 14 12 11 16 16 C 1.34852 * 125.88975 * 85.02191 * 15 14 12 17 17 C 1.40898 * 107.41532 * 180.02562 * 16 15 14 18 18 C 1.34855 * 107.41640 * 0.02562 * 17 16 15 19 19 C 1.50699 * 125.88653 * 180.02562 * 18 17 16 20 20 O 1.42899 * 109.47036 * 119.97348 * 19 18 17 21 21 Si 1.86295 * 109.47417 * 359.97171 * 19 18 17 22 22 N 1.36338 * 108.21723 * 359.73279 * 18 17 16 23 23 C 1.53775 * 87.07992 * 334.56762 * 9 8 6 24 24 H 1.08995 * 109.47644 * 300.00248 * 1 2 3 25 25 H 1.09001 * 109.47394 * 60.00559 * 1 2 3 26 26 H 1.09008 * 109.46666 * 179.97438 * 1 2 3 27 27 H 1.09001 * 109.46965 * 59.99908 * 5 3 2 28 28 H 1.08992 * 109.47106 * 299.99889 * 5 3 2 29 29 H 1.08997 * 113.61673 * 254.61847 * 8 6 5 30 30 H 1.09005 * 113.61396 * 25.51675 * 8 6 5 31 31 H 0.97005 * 120.00166 * 24.99923 * 11 9 8 32 32 H 1.09005 * 109.47006 * 300.00170 * 14 12 11 33 33 H 1.09004 * 109.46891 * 59.99671 * 14 12 11 34 34 H 1.07996 * 126.29470 * 359.97438 * 16 15 14 35 35 H 1.07996 * 126.29058 * 180.02562 * 17 16 15 36 36 H 1.08998 * 109.46974 * 239.96844 * 19 18 17 37 37 H 0.96696 * 114.00107 * 299.99781 * 20 19 18 38 38 H 1.48500 * 110.00102 * 58.68297 * 21 19 18 39 39 H 1.48495 * 110.00120 * 180.02562 * 21 19 18 40 40 H 0.97005 * 125.63666 * 180.26254 * 22 18 17 41 41 H 1.08993 * 113.61636 * 270.87622 * 23 9 8 42 42 H 1.09008 * 113.61006 * 139.97865 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2093 -0.0005 5 6 3.5662 1.2749 0.0006 6 6 4.0000 2.7422 -0.0002 7 1 3.4425 3.3487 0.7136 8 6 5.5233 2.9343 0.0856 9 6 5.3578 4.0751 -0.9322 10 1 5.1715 5.0462 -0.4732 11 7 6.4169 4.1177 -1.9434 12 6 6.7108 5.2779 -2.5630 13 8 6.0988 6.2869 -2.2830 14 6 7.8007 5.3219 -3.6028 15 6 7.9289 6.7251 -4.1372 16 6 8.6561 7.7177 -3.5855 17 6 8.4997 8.8574 -4.3991 18 6 7.6824 8.5179 -5.4166 19 6 7.2375 9.4268 -6.5333 20 8 7.6615 8.8851 -7.7859 21 14 7.9922 11.1138 -6.2990 22 7 7.3334 7.2088 -5.2643 23 6 4.0801 3.3621 -1.4052 24 1 -0.3634 0.5138 0.8899 25 1 -0.3634 0.5137 -0.8900 26 1 -0.3633 -1.0278 -0.0005 27 1 3.9563 0.7806 -0.8892 28 1 3.9556 0.7811 0.8908 29 1 5.8668 3.2688 1.0645 30 1 6.0925 2.0871 -0.2970 31 1 6.9067 3.3108 -2.1670 32 1 8.7453 5.0173 -3.1522 33 1 7.5519 4.6432 -4.4188 34 1 9.2488 7.6516 -2.6851 35 1 8.9513 9.8250 -4.2375 36 1 6.1508 9.5102 -6.5228 37 1 8.6197 8.7826 -7.8660 38 1 9.4734 11.0095 -6.2797 39 1 7.5606 12.0198 -7.3936 40 1 6.7550 6.7052 -5.8584 41 1 4.2547 2.6319 -2.1954 42 1 3.2583 4.0421 -1.6299 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17321982_14644196.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:26:39 Heat of formation + Delta-G solvation = -88.455536 kcal Electronic energy + Delta-G solvation = -24631.419591 eV Core-core repulsion = 20772.601145 eV Total energy + Delta-G solvation = -3858.818446 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.145 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -42.33682 -41.69150 -40.86653 -39.34946 -37.85786 -37.50068 -34.79023 -33.10894 -31.92887 -31.49666 -29.41371 -28.34730 -26.67876 -25.54309 -24.24238 -22.18492 -21.57610 -21.36316 -21.09846 -20.45490 -19.03134 -18.60905 -18.04611 -17.88972 -17.57149 -17.23553 -16.61943 -16.43436 -16.30411 -16.11564 -15.34081 -15.11072 -14.87836 -14.62243 -14.48927 -14.23105 -14.11010 -13.92137 -13.82836 -13.55654 -13.42070 -13.32724 -12.95603 -12.87310 -12.66830 -12.20744 -12.11423 -11.86632 -11.86155 -11.81917 -11.47390 -11.31900 -10.92919 -10.81351 -10.00223 -9.79916 -8.96268 -4.86426 1.10032 1.17396 1.27338 1.63508 1.65856 1.76720 1.88964 1.90853 2.34474 2.53553 3.37020 3.45529 3.50391 3.68997 3.76751 3.79185 3.83946 3.91181 4.06011 4.22526 4.24985 4.26662 4.34271 4.44365 4.47450 4.50196 4.63172 4.63683 4.68232 4.75566 4.79943 4.83179 4.87410 5.03911 5.11441 5.25372 5.28914 5.30838 5.41743 5.63402 5.98857 6.13419 6.42440 6.57494 6.67980 6.71056 7.31522 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.367 6.367 3 C 0.453 3.547 4 O -0.545 6.545 5 C -0.095 4.095 6 C -0.099 4.099 7 H 0.082 0.918 8 C -0.116 4.116 9 C 0.117 3.883 10 H 0.085 0.915 11 N -0.705 5.705 12 C 0.509 3.491 13 O -0.579 6.579 14 C -0.067 4.067 15 C 0.033 3.967 16 C -0.201 4.201 17 C -0.201 4.201 18 C -0.020 4.020 19 C -0.062 4.062 20 O -0.552 6.552 21 Si 0.790 3.210 22 N -0.538 5.538 23 C -0.147 4.147 24 H 0.058 0.942 25 H 0.057 0.943 26 H 0.128 0.872 27 H 0.134 0.866 28 H 0.136 0.864 29 H 0.084 0.916 30 H 0.123 0.877 31 H 0.420 0.580 32 H 0.145 0.855 33 H 0.128 0.872 34 H 0.142 0.858 35 H 0.152 0.848 36 H 0.117 0.883 37 H 0.388 0.612 38 H -0.279 1.279 39 H -0.296 1.296 40 H 0.418 0.582 41 H 0.102 0.898 42 H 0.041 0.959 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.813 -8.217 1.728 9.222 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.283 6.283 3 C 0.298 3.702 4 O -0.435 6.435 5 C -0.132 4.132 6 C -0.118 4.118 7 H 0.101 0.899 8 C -0.154 4.154 9 C 0.011 3.989 10 H 0.103 0.897 11 N -0.357 5.357 12 C 0.296 3.704 13 O -0.458 6.458 14 C -0.107 4.107 15 C -0.081 4.081 16 C -0.225 4.225 17 C -0.226 4.226 18 C -0.133 4.133 19 C -0.170 4.170 20 O -0.360 6.360 21 Si 0.693 3.307 22 N -0.133 5.133 23 C -0.186 4.186 24 H 0.077 0.923 25 H 0.076 0.924 26 H 0.146 0.854 27 H 0.152 0.848 28 H 0.153 0.847 29 H 0.103 0.897 30 H 0.141 0.859 31 H 0.259 0.741 32 H 0.163 0.837 33 H 0.145 0.855 34 H 0.160 0.840 35 H 0.169 0.831 36 H 0.135 0.865 37 H 0.237 0.763 38 H -0.205 1.205 39 H -0.224 1.224 40 H 0.255 0.745 41 H 0.120 0.880 42 H 0.060 0.940 Dipole moment (debyes) X Y Z Total from point charges 2.942 -6.703 1.379 7.449 hybrid contribution -0.241 -0.905 -0.994 1.366 sum 2.702 -7.609 0.385 8.083 Atomic orbital electron populations 1.23468 0.75414 1.05457 1.02173 1.86510 1.24511 1.33507 1.83821 1.24649 0.93755 0.80777 0.71006 1.90689 1.68410 1.37583 1.46839 1.21540 0.84801 0.98437 1.08427 1.22146 0.97372 0.94413 0.97877 0.89915 1.23348 0.94372 0.98049 0.99606 1.22358 0.87375 0.99219 0.89915 0.89711 1.45830 1.37980 1.11502 1.40427 1.21088 0.84005 0.83029 0.82280 1.90760 1.53699 1.35781 1.65586 1.20261 1.00065 0.92220 0.98127 1.19970 1.00997 0.96736 0.90420 1.20859 1.06159 0.93157 1.02319 1.20917 1.04292 1.00192 0.97224 1.20909 1.05057 0.86030 1.01329 1.24953 1.05435 1.05658 0.80968 1.86540 1.29350 1.85167 1.34923 0.93234 0.77910 0.73076 0.86444 1.41889 1.39465 1.10194 1.21786 1.23567 0.97365 0.99989 0.97694 0.92303 0.92415 0.85360 0.84824 0.84663 0.89693 0.85907 0.74136 0.83688 0.85451 0.84036 0.83098 0.86546 0.76279 1.20538 1.22408 0.74458 0.87955 0.93976 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 113.37 1.20 1.17 16 2 O -0.37 -0.61 10.57 -51.44 -0.54 -1.15 16 3 C 0.45 1.12 7.96 71.23 0.57 1.69 16 4 O -0.55 -5.68 15.54 21.97 0.34 -5.34 16 5 C -0.10 0.63 5.64 29.85 0.17 0.80 16 6 C -0.10 0.37 3.11 -10.27 -0.03 0.34 16 7 H 0.08 0.11 7.73 -2.39 -0.02 0.09 16 8 C -0.12 0.98 7.39 31.12 0.23 1.21 16 9 C 0.12 -0.22 4.24 45.52 0.19 -0.03 16 10 H 0.08 0.43 7.46 -2.38 -0.02 0.41 16 11 N -0.71 3.62 5.36 -440.05 -2.36 1.26 16 12 C 0.51 0.69 7.82 87.66 0.69 1.38 16 13 O -0.58 -7.53 15.63 -3.05 -0.05 -7.57 16 14 C -0.07 0.33 6.24 29.10 0.18 0.51 16 15 C 0.03 0.10 5.66 41.08 0.23 0.33 16 16 C -0.20 -1.09 10.77 22.14 0.24 -0.85 16 17 C -0.20 -1.04 9.37 22.14 0.21 -0.84 16 18 C -0.02 -0.09 6.51 41.08 0.27 0.18 16 19 C -0.06 -0.15 3.08 71.24 0.22 0.07 16 20 O -0.55 -2.08 12.88 -148.98 -1.92 -4.00 16 21 Si 0.79 0.44 30.58 68.60 2.10 2.54 16 22 N -0.54 -1.75 6.07 -171.12 -1.04 -2.78 16 23 C -0.15 0.17 7.43 31.12 0.23 0.40 16 24 H 0.06 0.00 8.13 -2.39 -0.02 -0.02 16 25 H 0.06 0.00 8.13 -2.39 -0.02 -0.01 16 26 H 0.13 -0.87 8.14 -2.38 -0.02 -0.89 16 27 H 0.13 -1.54 7.88 -2.39 -0.02 -1.56 16 28 H 0.14 -1.51 8.14 -2.39 -0.02 -1.53 16 29 H 0.08 -0.70 8.14 -2.39 -0.02 -0.72 16 30 H 0.12 -1.77 8.08 -2.38 -0.02 -1.79 16 31 H 0.42 -5.51 8.73 -92.70 -0.81 -6.32 16 32 H 0.15 -1.52 8.14 -2.38 -0.02 -1.54 16 33 H 0.13 -1.34 8.14 -2.38 -0.02 -1.36 16 34 H 0.14 0.44 8.06 -2.91 -0.02 0.42 16 35 H 0.15 0.26 6.22 -2.91 -0.02 0.24 16 36 H 0.12 0.19 7.96 -2.39 -0.02 0.17 16 37 H 0.39 -0.64 8.70 -74.06 -0.64 -1.29 16 38 H -0.28 -1.19 7.11 99.48 0.71 -0.48 16 39 H -0.30 -2.06 7.11 99.48 0.71 -1.35 16 40 H 0.42 0.00 8.96 -92.70 -0.83 -0.83 16 41 H 0.10 -0.51 7.92 -2.39 -0.02 -0.53 16 42 H 0.04 0.25 8.14 -2.38 -0.02 0.23 16 Total: 0.00 -29.27 359.44 -0.06 -29.33 By element: Atomic # 1 Polarization: -17.46 SS G_CDS: -1.18 Total: -18.64 kcal Atomic # 6 Polarization: 1.77 SS G_CDS: 4.59 Total: 6.35 kcal Atomic # 7 Polarization: 1.88 SS G_CDS: -3.40 Total: -1.52 kcal Atomic # 8 Polarization: -15.89 SS G_CDS: -2.17 Total: -18.06 kcal Atomic # 14 Polarization: 0.44 SS G_CDS: 2.10 Total: 2.54 kcal Total: -29.27 -0.06 -29.33 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_14644196.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.123 kcal (2) G-P(sol) polarization free energy of solvation -29.272 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.395 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.061 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.333 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.456 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds