Wall clock time and date at job start Tue Mar 9 2021 15:26:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45205 * 1 3 3 C 1.34226 * 116.99699 * 2 1 4 4 O 1.20821 * 120.00606 * 359.97438 * 3 2 1 5 5 C 1.50704 * 119.99549 * 179.97438 * 3 2 1 6 6 C 1.53003 * 109.46962 * 179.97438 * 5 3 2 7 7 H 1.09004 * 112.84496 * 43.80366 * 6 5 3 8 8 C 1.53778 * 113.61196 * 174.99667 * 6 5 3 9 9 C 1.53787 * 87.08035 * 140.06532 * 8 6 5 10 10 H 1.09004 * 113.61202 * 89.11582 * 9 8 6 11 11 N 1.46496 * 113.61566 * 220.01945 * 9 8 6 12 12 C 1.34776 * 120.00015 * 205.00016 * 11 9 8 13 13 O 1.21280 * 119.99898 * 359.97438 * 12 11 9 14 14 C 1.50704 * 120.00197 * 180.02562 * 12 11 9 15 15 C 1.53536 * 109.81825 * 278.20730 * 14 12 11 16 16 C 1.53044 * 108.56008 * 179.50930 * 15 14 12 17 17 C 1.50207 * 110.31235 * 49.57308 * 16 15 14 18 18 C 1.50701 * 118.54594 * 159.97152 * 17 16 15 19 19 O 1.42907 * 109.47313 * 69.97410 * 18 17 16 20 20 Si 1.86295 * 109.47336 * 189.97541 * 18 17 16 21 21 C 1.31112 * 122.90895 * 339.94186 * 17 16 15 22 22 N 1.38924 * 121.85106 * 0.41522 * 21 17 16 23 23 C 1.53778 * 113.68969 * 272.53432 * 6 5 3 24 24 H 1.09002 * 109.46921 * 179.97438 * 1 2 3 25 25 H 1.08998 * 109.47522 * 299.99875 * 1 2 3 26 26 H 1.09001 * 109.46859 * 60.00674 * 1 2 3 27 27 H 1.08994 * 109.47332 * 59.99634 * 5 3 2 28 28 H 1.08999 * 109.47023 * 299.99739 * 5 3 2 29 29 H 1.08998 * 113.61879 * 25.52015 * 8 6 5 30 30 H 1.08997 * 113.69304 * 254.62101 * 8 6 5 31 31 H 0.96998 * 120.00377 * 24.99850 * 11 9 8 32 32 H 1.09003 * 109.81101 * 39.13240 * 14 12 11 33 33 H 1.08997 * 109.62262 * 299.22711 * 15 14 12 34 34 H 1.09003 * 109.62396 * 59.79180 * 15 14 12 35 35 H 1.08997 * 109.33069 * 289.31521 * 16 15 14 36 36 H 1.09000 * 109.32846 * 169.82867 * 16 15 14 37 37 H 1.08997 * 109.47177 * 309.97733 * 18 17 16 38 38 H 0.96700 * 113.99502 * 59.99502 * 19 18 17 39 39 H 1.48498 * 110.00077 * 179.97438 * 20 18 17 40 40 H 1.48498 * 110.00048 * 301.31766 * 20 18 17 41 41 H 1.08000 * 119.07489 * 180.38222 * 21 17 16 42 42 H 0.96992 * 120.55884 * 166.70258 * 22 21 17 43 43 H 1.08993 * 113.61229 * 105.46192 * 23 6 5 44 44 H 1.09000 * 113.61263 * 334.55842 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2748 0.0006 6 6 4.0002 2.7421 -0.0002 7 1 3.4246 3.3539 0.6945 8 6 5.5208 2.9348 0.1232 9 6 5.3816 4.0680 -0.9071 10 1 5.1837 5.0424 -0.4604 11 7 6.4652 4.1018 -1.8924 12 6 6.7755 5.2569 -2.5135 13 8 6.1573 6.2683 -2.2571 14 6 7.8898 5.2916 -3.5275 15 6 9.2425 5.4090 -2.8106 16 6 10.3521 5.4294 -3.8644 17 6 10.0371 6.4358 -4.9340 18 6 11.1627 6.9469 -5.7959 19 8 11.6119 5.9023 -6.6616 20 14 10.5597 8.3835 -6.8173 21 6 8.8261 6.8888 -5.1513 22 7 7.7398 6.4706 -4.3930 23 6 4.1162 3.3513 -1.4074 24 1 -0.3633 -1.0277 -0.0005 25 1 -0.3634 0.5138 0.8900 26 1 -0.3633 0.5137 -0.8901 27 1 3.9564 0.7805 -0.8890 28 1 3.9557 0.7809 0.8908 29 1 6.0995 2.0848 -0.2382 30 1 5.8405 3.2767 1.1076 31 1 6.9594 3.2928 -2.0977 32 1 7.8681 4.3844 -4.1314 33 1 9.2708 6.3319 -2.2314 34 1 9.3816 4.5539 -2.1490 35 1 10.4407 4.4405 -4.3142 36 1 11.2968 5.6924 -3.3885 37 1 11.9870 7.2727 -5.1616 38 1 10.9287 5.5630 -7.2559 39 1 11.6606 8.8971 -7.6713 40 1 9.4151 7.9602 -7.6634 41 1 8.6687 7.6077 -5.9418 42 1 6.8966 6.9482 -4.4341 43 1 3.3006 4.0295 -1.6581 44 1 4.3108 2.6150 -2.1872 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17321982_15413834.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:26:42 Heat of formation + Delta-G solvation = -109.102599 kcal Electronic energy + Delta-G solvation = -25574.806327 eV Core-core repulsion = 21687.781079 eV Total energy + Delta-G solvation = -3887.025248 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 311.161 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -41.78370 -41.35615 -40.12686 -39.10280 -37.54089 -37.40301 -34.94972 -33.20374 -32.97093 -31.46387 -28.50361 -27.52890 -26.68896 -25.51217 -24.53817 -23.47108 -22.01569 -21.60804 -20.56998 -19.37175 -19.04927 -18.57674 -18.02174 -17.87925 -17.57278 -17.20260 -16.76889 -16.27640 -16.25193 -16.04194 -15.69210 -15.19030 -15.15529 -14.83619 -14.52354 -14.44546 -14.17445 -13.97413 -13.81192 -13.47316 -13.35880 -12.99585 -12.92796 -12.91594 -12.78819 -12.38669 -12.15131 -11.94758 -11.86863 -11.81872 -11.64315 -11.47839 -11.32783 -11.24047 -10.83349 -10.29101 -10.08540 -8.45551 -4.88993 1.17709 1.33941 1.41191 1.46667 1.56615 1.75542 1.95553 1.99487 2.65682 3.44026 3.48061 3.55741 3.60173 3.76867 3.80053 3.83954 3.89283 3.91162 4.06337 4.24886 4.26849 4.29553 4.33949 4.47450 4.49025 4.63032 4.64360 4.68515 4.73764 4.75237 4.78305 4.82129 4.86997 5.01722 5.05740 5.10445 5.25344 5.27339 5.31725 5.41136 5.57479 5.59969 6.26152 6.49148 6.65457 6.71246 6.81815 7.14347 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.367 6.367 3 C 0.453 3.547 4 O -0.545 6.545 5 C -0.096 4.096 6 C -0.099 4.099 7 H 0.084 0.916 8 C -0.117 4.117 9 C 0.117 3.883 10 H 0.089 0.911 11 N -0.698 5.698 12 C 0.512 3.488 13 O -0.576 6.576 14 C 0.138 3.862 15 C -0.120 4.120 16 C -0.051 4.051 17 C -0.281 4.281 18 C -0.054 4.054 19 O -0.556 6.556 20 Si 0.741 3.259 21 C 0.136 3.864 22 N -0.738 5.738 23 C -0.147 4.147 24 H 0.128 0.872 25 H 0.058 0.942 26 H 0.057 0.943 27 H 0.133 0.867 28 H 0.135 0.865 29 H 0.122 0.878 30 H 0.086 0.914 31 H 0.421 0.579 32 H 0.110 0.890 33 H 0.060 0.940 34 H 0.101 0.899 35 H 0.070 0.930 36 H 0.074 0.926 37 H 0.112 0.888 38 H 0.382 0.618 39 H -0.311 1.311 40 H -0.284 1.284 41 H 0.140 0.860 42 H 0.406 0.594 43 H 0.045 0.955 44 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.032 -6.744 2.386 7.228 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.284 6.284 3 C 0.298 3.702 4 O -0.435 6.435 5 C -0.133 4.133 6 C -0.118 4.118 7 H 0.102 0.898 8 C -0.155 4.155 9 C 0.012 3.988 10 H 0.107 0.893 11 N -0.350 5.350 12 C 0.298 3.702 13 O -0.455 6.455 14 C 0.029 3.971 15 C -0.159 4.159 16 C -0.088 4.088 17 C -0.292 4.292 18 C -0.164 4.164 19 O -0.363 6.363 20 Si 0.649 3.351 21 C 0.015 3.985 22 N -0.370 5.370 23 C -0.186 4.186 24 H 0.146 0.854 25 H 0.077 0.923 26 H 0.076 0.924 27 H 0.151 0.849 28 H 0.153 0.847 29 H 0.140 0.860 30 H 0.104 0.896 31 H 0.259 0.741 32 H 0.127 0.873 33 H 0.079 0.921 34 H 0.120 0.880 35 H 0.089 0.911 36 H 0.092 0.908 37 H 0.130 0.870 38 H 0.231 0.769 39 H -0.240 1.240 40 H -0.212 1.212 41 H 0.157 0.843 42 H 0.242 0.758 43 H 0.064 0.936 44 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 0.805 -5.451 2.168 5.921 hybrid contribution -0.882 -0.666 -0.840 1.388 sum -0.077 -6.116 1.327 6.259 Atomic orbital electron populations 1.23469 0.75404 1.05449 1.02187 1.86511 1.24520 1.33529 1.83813 1.24641 0.93754 0.80776 0.71002 1.90685 1.68410 1.37551 1.46851 1.21546 0.84820 0.98485 1.08415 1.22149 0.97307 0.94460 0.97884 0.89756 1.23360 0.94477 0.98091 0.99528 1.22436 0.86718 0.99549 0.90143 0.89253 1.45799 1.36172 1.11416 1.41603 1.20945 0.83887 0.83408 0.81968 1.90728 1.54225 1.35255 1.65330 1.21125 0.93637 0.91331 0.91002 1.21840 0.92240 1.03742 0.98043 1.19949 0.97841 0.97768 0.93290 1.20921 0.93291 1.09854 1.05092 1.24817 0.99710 0.96644 0.95276 1.86546 1.41972 1.54154 1.53679 0.94432 0.76300 0.82260 0.82123 1.20597 0.87017 0.97009 0.93833 1.44402 1.13673 1.32098 1.46877 1.23578 0.97322 1.00076 0.97622 0.85403 0.92281 0.92389 0.84871 0.84670 0.85960 0.89555 0.74125 0.87301 0.92101 0.88014 0.91134 0.90796 0.87016 0.76940 1.23965 1.21173 0.84333 0.75788 0.93611 0.87930 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.16 16 2 O -0.37 -0.47 10.57 -51.37 -0.54 -1.02 16 3 C 0.45 0.87 7.96 71.24 0.57 1.44 16 4 O -0.54 -5.30 15.51 21.98 0.34 -4.96 16 5 C -0.10 0.69 5.65 29.85 0.17 0.86 16 6 C -0.10 0.46 3.15 -10.27 -0.03 0.43 16 7 H 0.08 0.03 7.68 -2.38 -0.02 0.01 16 8 C -0.12 1.10 7.39 31.12 0.23 1.33 16 9 C 0.12 -0.37 4.24 45.52 0.19 -0.18 16 10 H 0.09 0.28 7.47 -2.39 -0.02 0.26 16 11 N -0.70 3.96 5.35 -440.02 -2.36 1.60 16 12 C 0.51 0.35 7.08 87.66 0.62 0.97 16 13 O -0.58 -5.94 15.70 -3.03 -0.05 -5.99 16 14 C 0.14 -0.40 3.36 44.33 0.15 -0.25 16 15 C -0.12 0.47 5.47 30.79 0.17 0.64 16 16 C -0.05 0.12 5.85 29.71 0.17 0.30 16 17 C -0.28 0.16 5.37 -16.75 -0.09 0.07 16 18 C -0.05 -0.02 2.81 71.24 0.20 0.18 16 19 O -0.56 -1.84 12.88 -148.98 -1.92 -3.76 16 20 Si 0.74 -0.04 29.96 68.60 2.06 2.01 16 21 C 0.14 -0.09 9.61 83.42 0.80 0.72 16 22 N -0.74 -0.11 5.46 -329.00 -1.80 -1.91 16 23 C -0.15 0.35 7.43 31.12 0.23 0.58 16 24 H 0.13 -0.90 8.14 -2.39 -0.02 -0.92 16 25 H 0.06 -0.03 8.13 -2.39 -0.02 -0.04 16 26 H 0.06 -0.02 8.13 -2.39 -0.02 -0.04 16 27 H 0.13 -1.59 7.85 -2.39 -0.02 -1.61 16 28 H 0.14 -1.58 8.14 -2.39 -0.02 -1.60 16 29 H 0.12 -1.84 8.08 -2.39 -0.02 -1.86 16 30 H 0.09 -0.80 8.14 -2.39 -0.02 -0.82 16 31 H 0.42 -5.40 8.73 -92.71 -0.81 -6.21 16 32 H 0.11 -0.75 8.14 -2.39 -0.02 -0.77 16 33 H 0.06 0.02 8.14 -2.39 -0.02 0.00 16 34 H 0.10 -0.88 8.14 -2.39 -0.02 -0.90 16 35 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 36 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 37 H 0.11 -0.02 7.96 -2.39 -0.02 -0.04 16 38 H 0.38 -0.90 8.70 -74.06 -0.64 -1.55 16 39 H -0.31 -2.62 7.11 99.48 0.71 -1.91 16 40 H -0.28 -0.88 6.82 99.48 0.68 -0.20 16 41 H 0.14 -0.34 4.31 -2.91 -0.01 -0.36 16 42 H 0.41 0.61 8.12 -92.71 -0.75 -0.14 16 43 H 0.04 0.19 8.14 -2.39 -0.02 0.18 16 44 H 0.10 -0.60 7.90 -2.39 -0.02 -0.62 16 Total: 0.00 -24.46 361.62 -0.85 -25.31 By element: Atomic # 1 Polarization: -18.36 SS G_CDS: -1.16 Total: -19.52 kcal Atomic # 6 Polarization: 3.66 SS G_CDS: 4.58 Total: 8.24 kcal Atomic # 7 Polarization: 3.84 SS G_CDS: -4.15 Total: -0.31 kcal Atomic # 8 Polarization: -13.55 SS G_CDS: -2.17 Total: -15.72 kcal Atomic # 14 Polarization: -0.04 SS G_CDS: 2.06 Total: 2.01 kcal Total: -24.46 -0.85 -25.31 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_15413834.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.796 kcal (2) G-P(sol) polarization free energy of solvation -24.460 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.256 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.847 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.306 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.103 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds