Wall clock time and date at job start Tue Mar 9 2021 15:26:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34224 * 116.99728 * 2 1 4 4 O 1.20828 * 120.00337 * 0.02562 * 3 2 1 5 5 C 1.50700 * 119.99979 * 180.02562 * 3 2 1 6 6 C 1.52998 * 109.47310 * 180.02562 * 5 3 2 7 7 H 1.09003 * 112.85341 * 43.80170 * 6 5 3 8 8 C 1.53787 * 113.61787 * 174.99740 * 6 5 3 9 9 C 1.53781 * 87.07987 * 140.06383 * 8 6 5 10 10 H 1.09002 * 113.61228 * 89.11929 * 9 8 6 11 11 N 1.46500 * 113.61339 * 219.93875 * 9 8 6 12 12 C 1.34781 * 119.99985 * 203.47543 * 11 9 8 13 13 O 1.21280 * 119.99799 * 359.97438 * 12 11 9 14 14 C 1.50701 * 119.99932 * 179.97438 * 12 11 9 15 15 O 1.42895 * 109.46838 * 179.97438 * 14 12 11 16 16 C 1.35902 * 117.00017 * 179.97438 * 15 14 12 17 17 C 1.38729 * 120.05541 * 359.73110 * 16 15 14 18 18 C 1.38146 * 119.94570 * 179.74176 * 17 16 15 19 19 C 1.38264 * 120.05537 * 0.50554 * 18 17 16 20 20 C 1.50694 * 119.94903 * 179.74712 * 19 18 17 21 21 O 1.42905 * 109.47470 * 245.02447 * 20 19 18 22 22 Si 1.86309 * 109.46885 * 5.02131 * 20 19 18 23 23 C 1.38268 * 120.11035 * 359.76728 * 19 18 17 24 24 C 1.38151 * 120.05722 * 359.97438 * 23 19 18 25 25 C 1.53779 * 113.68908 * 272.53499 * 6 5 3 26 26 H 1.09001 * 109.47161 * 179.97438 * 1 2 3 27 27 H 1.08992 * 109.47439 * 299.99663 * 1 2 3 28 28 H 1.08999 * 109.47693 * 60.00304 * 1 2 3 29 29 H 1.09002 * 109.47544 * 59.99918 * 5 3 2 30 30 H 1.09006 * 109.47024 * 300.00212 * 5 3 2 31 31 H 1.09005 * 113.61051 * 25.51787 * 8 6 5 32 32 H 1.08996 * 113.69311 * 254.62415 * 8 6 5 33 33 H 0.96998 * 120.00149 * 23.46564 * 11 9 8 34 34 H 1.08997 * 109.46730 * 299.99650 * 14 12 11 35 35 H 1.08994 * 109.46768 * 60.00057 * 14 12 11 36 36 H 1.08001 * 120.02500 * 359.97438 * 17 16 15 37 37 H 1.07997 * 119.97349 * 180.22969 * 18 17 16 38 38 H 1.08996 * 109.47612 * 125.01883 * 20 19 18 39 39 H 0.96694 * 114.00542 * 179.97438 * 21 20 19 40 40 H 1.48497 * 110.00076 * 178.68538 * 22 20 19 41 41 H 1.48500 * 109.99652 * 300.00106 * 22 20 19 42 42 H 1.08001 * 119.97673 * 179.97438 * 23 19 18 43 43 H 1.07998 * 120.02620 * 179.97438 * 24 23 19 44 44 H 1.09003 * 113.61775 * 105.46383 * 25 6 5 45 45 H 1.08996 * 113.61960 * 334.55110 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2093 0.0005 5 6 3.5662 1.2749 -0.0006 6 6 4.0000 2.7421 0.0002 7 1 3.4251 3.3532 0.6961 8 6 5.5208 2.9349 0.1225 9 6 5.3806 4.0693 -0.9062 10 1 5.1831 5.0431 -0.4581 11 7 6.4644 4.1055 -1.8912 12 6 6.7534 5.2549 -2.5332 13 8 6.1159 6.2589 -2.2957 14 6 7.8687 5.2923 -3.5460 15 8 7.9787 6.6112 -4.0848 16 6 8.9441 6.8176 -5.0188 17 6 9.7721 5.7735 -5.4046 18 6 10.7492 5.9845 -6.3582 19 6 10.9091 7.2376 -6.9203 20 6 11.9795 7.4665 -7.9560 21 8 12.9520 8.3790 -7.4426 22 14 12.8035 5.8466 -8.3659 23 6 10.0888 8.2812 -6.5333 24 6 9.1067 8.0741 -5.5840 25 6 4.1149 3.3532 -1.4063 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3634 0.5137 0.8899 28 1 -0.3634 0.5138 -0.8900 29 1 3.9557 0.7810 -0.8908 30 1 3.9563 0.7806 0.8892 31 1 6.0992 2.0853 -0.2405 32 1 5.8413 3.2754 1.1071 33 1 6.9741 3.3025 -2.0813 34 1 8.8066 5.0169 -3.0639 35 1 7.6530 4.5886 -4.3500 36 1 9.6505 4.7956 -4.9626 37 1 11.3916 5.1712 -6.6616 38 1 11.5299 7.8836 -8.8571 39 1 13.6728 8.5728 -8.0573 40 1 13.8395 6.0535 -9.4094 41 1 13.4204 5.2675 -7.1455 42 1 10.2159 9.2593 -6.9735 43 1 8.4666 8.8897 -5.2818 44 1 3.2990 4.0318 -1.6556 45 1 4.3089 2.6181 -2.1873 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17321982_2989410.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:26:53 Heat of formation + Delta-G solvation = -132.687001 kcal Electronic energy + Delta-G solvation = -27414.009404 eV Core-core repulsion = 23171.790517 eV Total energy + Delta-G solvation = -4242.218887 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.150 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -41.77259 -41.47815 -40.82179 -39.59018 -38.78047 -37.49960 -37.29974 -34.92901 -32.48020 -31.85791 -31.64870 -29.59210 -28.29981 -26.68850 -26.21498 -24.71154 -23.80901 -22.35502 -21.84330 -21.62048 -20.51049 -19.47581 -18.64283 -18.54221 -18.24067 -17.83245 -17.57149 -17.40093 -17.29238 -16.78039 -16.64763 -16.16939 -15.68961 -15.59414 -15.51938 -15.04587 -14.83533 -14.49660 -14.45079 -14.10822 -13.98131 -13.93642 -13.54893 -13.47151 -13.39843 -13.34915 -12.92365 -12.79296 -12.47281 -12.18917 -12.16274 -11.88844 -11.86944 -11.81048 -11.70339 -11.47803 -11.32600 -10.95730 -10.45695 -10.11912 -10.03297 -9.22468 -4.90556 0.27032 0.31462 1.18941 1.33214 1.43344 1.49910 1.62754 1.80311 1.96767 2.60637 2.63349 3.43438 3.44027 3.48173 3.55646 3.76586 3.79749 3.82605 3.84152 3.91359 3.98458 4.05081 4.12296 4.26023 4.27876 4.30057 4.31147 4.41132 4.45906 4.48855 4.64355 4.68932 4.69617 4.75936 4.80447 4.87655 4.97059 5.02126 5.10729 5.16347 5.24500 5.25088 5.41939 5.50881 5.57449 5.69478 6.27417 6.49814 6.61144 6.72505 7.15641 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.367 6.367 3 C 0.453 3.547 4 O -0.546 6.546 5 C -0.095 4.095 6 C -0.100 4.100 7 H 0.082 0.918 8 C -0.114 4.114 9 C 0.115 3.885 10 H 0.085 0.915 11 N -0.695 5.695 12 C 0.510 3.490 13 O -0.578 6.578 14 C 0.036 3.964 15 O -0.321 6.321 16 C 0.120 3.880 17 C -0.199 4.199 18 C -0.079 4.079 19 C -0.124 4.124 20 C -0.086 4.086 21 O -0.561 6.561 22 Si 0.770 3.230 23 C -0.062 4.062 24 C -0.167 4.167 25 C -0.148 4.148 26 H 0.128 0.872 27 H 0.058 0.942 28 H 0.057 0.943 29 H 0.136 0.864 30 H 0.136 0.864 31 H 0.127 0.873 32 H 0.085 0.915 33 H 0.425 0.575 34 H 0.127 0.873 35 H 0.130 0.870 36 H 0.168 0.832 37 H 0.150 0.850 38 H 0.091 0.909 39 H 0.394 0.606 40 H -0.290 1.290 41 H -0.293 1.293 42 H 0.135 0.865 43 H 0.127 0.873 44 H 0.043 0.957 45 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.368 -11.098 -2.194 11.803 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.283 6.283 3 C 0.298 3.702 4 O -0.436 6.436 5 C -0.132 4.132 6 C -0.119 4.119 7 H 0.101 0.899 8 C -0.152 4.152 9 C 0.010 3.990 10 H 0.103 0.897 11 N -0.349 5.349 12 C 0.297 3.703 13 O -0.457 6.457 14 C -0.042 4.042 15 O -0.234 6.234 16 C 0.075 3.925 17 C -0.217 4.217 18 C -0.096 4.096 19 C -0.124 4.124 20 C -0.195 4.195 21 O -0.371 6.371 22 Si 0.675 3.325 23 C -0.080 4.080 24 C -0.186 4.186 25 C -0.186 4.186 26 H 0.146 0.854 27 H 0.076 0.924 28 H 0.076 0.924 29 H 0.154 0.846 30 H 0.154 0.846 31 H 0.145 0.855 32 H 0.104 0.896 33 H 0.263 0.737 34 H 0.144 0.856 35 H 0.148 0.852 36 H 0.185 0.815 37 H 0.168 0.832 38 H 0.109 0.891 39 H 0.244 0.756 40 H -0.217 1.217 41 H -0.221 1.221 42 H 0.153 0.847 43 H 0.145 0.855 44 H 0.062 0.938 45 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges 2.889 -10.428 -1.450 10.917 hybrid contribution 0.288 1.336 -0.037 1.367 sum 3.178 -9.092 -1.487 9.745 Atomic orbital electron populations 1.23465 0.75429 1.05456 1.02166 1.86508 1.24494 1.33495 1.83813 1.24664 0.93797 0.80765 0.70985 1.90692 1.68440 1.37609 1.46878 1.21543 0.84751 0.98304 1.08555 1.22147 0.97316 0.94585 0.97817 0.89922 1.23358 0.94511 0.97942 0.99360 1.22452 0.86820 0.99529 0.90185 0.89719 1.45636 1.36247 1.11844 1.41186 1.20666 0.84287 0.83531 0.81824 1.90768 1.53139 1.36024 1.65724 1.22786 0.99269 0.84492 0.97634 1.86132 1.51820 1.31812 1.53648 1.19200 0.88834 0.94927 0.89515 1.21483 0.98253 0.99862 1.02077 1.21058 0.97327 0.96447 0.94764 1.19443 0.97943 0.94466 1.00590 1.25047 0.92079 1.04693 0.97637 1.86555 1.38884 1.64677 1.46976 0.94161 0.82799 0.78097 0.77402 1.20934 0.92761 0.99303 0.94980 1.20625 1.01797 0.95927 1.00248 1.23599 0.97174 1.00082 0.97784 0.85356 0.92350 0.92393 0.84614 0.84590 0.85525 0.89603 0.73650 0.85589 0.85198 0.81469 0.83245 0.89122 0.75617 1.21733 1.22066 0.84734 0.85479 0.93824 0.87486 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.16 16 2 O -0.37 -0.49 10.57 -51.36 -0.54 -1.03 16 3 C 0.45 0.96 7.96 71.24 0.57 1.52 16 4 O -0.55 -5.59 15.51 21.96 0.34 -5.25 16 5 C -0.09 0.69 5.65 29.85 0.17 0.86 16 6 C -0.10 0.42 3.15 -10.27 -0.03 0.39 16 7 H 0.08 0.09 7.68 -2.39 -0.02 0.08 16 8 C -0.11 1.04 7.39 31.12 0.23 1.27 16 9 C 0.12 -0.24 4.22 45.52 0.19 -0.04 16 10 H 0.08 0.43 7.50 -2.39 -0.02 0.42 16 11 N -0.70 3.61 5.36 -440.02 -2.36 1.25 16 12 C 0.51 1.55 7.91 87.66 0.69 2.25 16 13 O -0.58 -9.25 16.12 16.01 0.26 -8.99 16 14 C 0.04 -0.11 5.22 71.24 0.37 0.26 16 15 O -0.32 -2.22 9.67 -73.41 -0.71 -2.93 16 16 C 0.12 0.57 6.69 22.51 0.15 0.72 16 17 C -0.20 0.24 9.04 22.37 0.20 0.44 16 18 C -0.08 0.04 8.66 22.25 0.19 0.23 16 19 C -0.12 -0.33 5.38 -19.85 -0.11 -0.43 16 20 C -0.09 0.04 2.79 71.23 0.20 0.24 16 21 O -0.56 -1.57 12.81 -148.98 -1.91 -3.48 16 22 Si 0.77 -2.46 29.85 68.60 2.05 -0.41 16 23 C -0.06 -0.29 9.68 22.26 0.22 -0.08 16 24 C -0.17 -1.09 9.99 22.37 0.22 -0.87 16 25 C -0.15 0.23 7.44 31.12 0.23 0.47 16 26 H 0.13 -0.90 8.14 -2.39 -0.02 -0.92 16 27 H 0.06 -0.01 8.13 -2.39 -0.02 -0.03 16 28 H 0.06 -0.01 8.13 -2.39 -0.02 -0.03 16 29 H 0.14 -1.69 7.85 -2.39 -0.02 -1.71 16 30 H 0.14 -1.62 8.14 -2.38 -0.02 -1.64 16 31 H 0.13 -1.98 8.07 -2.38 -0.02 -2.00 16 32 H 0.09 -0.76 8.14 -2.39 -0.02 -0.78 16 33 H 0.42 -6.07 8.71 -92.71 -0.81 -6.88 16 34 H 0.13 -1.22 7.65 -2.39 -0.02 -1.24 16 35 H 0.13 -1.35 7.68 -2.39 -0.02 -1.37 16 36 H 0.17 -1.56 6.30 -2.91 -0.02 -1.58 16 37 H 0.15 -0.77 4.86 -2.91 -0.01 -0.79 16 38 H 0.09 -0.36 7.96 -2.39 -0.02 -0.38 16 39 H 0.39 -2.08 8.74 -74.06 -0.65 -2.73 16 40 H -0.29 -0.41 7.11 99.48 0.71 0.30 16 41 H -0.29 -0.88 7.05 99.48 0.70 -0.18 16 42 H 0.13 0.40 8.06 -2.91 -0.02 0.37 16 43 H 0.13 0.86 8.06 -2.91 -0.02 0.84 16 44 H 0.04 0.24 8.14 -2.39 -0.02 0.23 16 45 H 0.11 -0.64 7.90 -2.39 -0.02 -0.66 16 Total: 0.00 -34.54 381.59 1.43 -33.12 By element: Atomic # 1 Polarization: -20.26 SS G_CDS: -0.39 Total: -20.65 kcal Atomic # 6 Polarization: 3.69 SS G_CDS: 4.69 Total: 8.38 kcal Atomic # 7 Polarization: 3.61 SS G_CDS: -2.36 Total: 1.25 kcal Atomic # 8 Polarization: -19.12 SS G_CDS: -2.56 Total: -21.68 kcal Atomic # 14 Polarization: -2.46 SS G_CDS: 2.05 Total: -0.41 kcal Total: -34.54 1.43 -33.12 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_2989410.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -99.570 kcal (2) G-P(sol) polarization free energy of solvation -34.544 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -134.114 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.427 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.117 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.687 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds