Wall clock time and date at job start Tue Mar 9 2021 13:18:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.37793 * 119.84682 * 2 1 4 4 C 1.39711 * 119.90697 * 180.27422 * 3 2 1 5 5 C 1.47528 * 120.19566 * 179.77096 * 4 3 2 6 6 O 1.21588 * 120.00466 * 179.72534 * 5 4 3 7 7 N 1.34784 * 119.99801 * 359.72017 * 5 4 3 8 8 C 1.46496 * 120.00030 * 180.02562 * 7 5 4 9 9 H 1.09001 * 109.47217 * 324.99900 * 8 7 5 10 10 C 1.53004 * 109.47385 * 85.00010 * 8 7 5 11 11 C 1.52999 * 109.47315 * 180.02562 * 10 8 7 12 12 C 1.52998 * 109.46714 * 300.00047 * 11 10 8 13 13 H 1.09003 * 109.47528 * 300.00017 * 12 11 10 14 14 C 1.53000 * 109.47174 * 180.02562 * 12 11 10 15 15 N 1.46896 * 109.47497 * 64.99158 * 14 12 11 16 16 H 1.00901 * 109.47215 * 305.00935 * 15 14 12 17 17 C 1.46901 * 109.47230 * 185.00191 * 15 14 12 18 18 C 1.46902 * 109.46688 * 65.00805 * 15 14 12 19 19 C 1.52999 * 109.47761 * 59.99968 * 12 11 10 20 20 C 1.52999 * 109.47001 * 204.99819 * 8 7 5 21 21 C 1.40150 * 119.61210 * 359.49121 * 4 3 2 22 22 O 1.35654 * 120.14464 * 180.22752 * 21 4 3 23 23 C 1.38694 * 119.70196 * 0.25352 * 21 4 3 24 24 C 1.50700 * 119.95650 * 179.97438 * 23 21 4 25 25 O 1.42903 * 109.46964 * 75.00437 * 24 23 21 26 26 Si 1.86307 * 109.47095 * 195.00023 * 24 23 21 27 27 C 1.38058 * 120.08650 * 359.97438 * 23 21 4 28 28 H 1.08996 * 109.47521 * 270.25753 * 1 2 3 29 29 H 1.09002 * 109.46881 * 30.26016 * 1 2 3 30 30 H 1.09004 * 109.46890 * 150.25710 * 1 2 3 31 31 H 1.08000 * 120.05154 * 0.04525 * 3 2 1 32 32 H 0.97002 * 119.99501 * 359.97438 * 7 5 4 33 33 H 1.09006 * 109.46634 * 300.00349 * 10 8 7 34 34 H 1.09001 * 109.47033 * 59.99777 * 10 8 7 35 35 H 1.08999 * 109.47047 * 180.02562 * 11 10 8 36 36 H 1.08993 * 109.47112 * 59.99768 * 11 10 8 37 37 H 1.09009 * 109.46722 * 304.99539 * 14 12 11 38 38 H 1.09000 * 109.47107 * 185.00179 * 14 12 11 39 39 H 1.09002 * 109.47401 * 300.00354 * 17 15 14 40 40 H 1.09001 * 109.46874 * 180.02562 * 17 15 14 41 41 H 1.09004 * 109.46970 * 60.00500 * 17 15 14 42 42 H 1.09002 * 109.47411 * 59.99973 * 18 15 14 43 43 H 1.09001 * 109.47165 * 180.02562 * 18 15 14 44 44 H 1.09004 * 109.46739 * 299.99477 * 18 15 14 45 45 H 1.09001 * 109.46823 * 59.99927 * 19 12 11 46 46 H 1.08996 * 109.47616 * 180.02562 * 19 12 11 47 47 H 1.08999 * 109.46915 * 60.00207 * 20 8 7 48 48 H 1.09001 * 109.47201 * 300.00091 * 20 8 7 49 49 H 0.96713 * 113.99623 * 90.00190 * 22 21 4 50 50 H 1.09000 * 109.47608 * 314.99815 * 24 23 21 51 51 H 0.96701 * 113.99922 * 179.97438 * 25 24 23 52 52 H 1.48498 * 110.00089 * 300.00386 * 26 24 23 53 53 H 1.48501 * 109.99627 * 61.32184 * 26 24 23 54 54 H 1.08002 * 119.80327 * 180.02562 * 27 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1927 1.1952 0.0000 4 6 3.5898 1.1966 -0.0058 5 6 4.3305 2.4725 -0.0109 6 8 5.5464 2.4698 -0.0109 7 7 3.6593 3.6413 -0.0157 8 6 4.3947 4.9083 -0.0214 9 1 5.3053 4.8025 0.5682 10 6 4.7590 5.2802 -1.4601 11 6 5.5276 6.6031 -1.4660 12 6 4.6536 7.7033 -0.8606 13 1 3.7429 7.8096 -1.4500 14 6 5.4219 9.0264 -0.8669 15 7 5.6670 9.4437 -2.2539 16 1 6.1384 8.7022 -2.7499 17 6 6.5066 10.6491 -2.2615 18 6 4.3859 9.7352 -2.9111 19 6 4.2892 7.3315 0.5782 20 6 3.5202 6.0083 0.5837 21 6 4.2837 -0.0211 -0.0008 22 8 5.6402 -0.0322 -0.0016 23 6 3.5772 -1.2145 0.0046 24 6 4.3174 -2.5272 0.0094 25 8 4.8559 -2.7655 1.3115 26 14 3.1442 -3.9034 -0.4388 27 6 2.1966 -1.2016 0.0055 28 1 -0.3634 0.0046 1.0276 29 1 -0.3633 0.8877 -0.5179 30 1 -0.3633 -0.8923 -0.5099 31 1 1.6511 2.1295 0.0007 32 1 2.6892 3.6435 -0.0162 33 1 5.3820 4.4964 -1.8913 34 1 3.8484 5.3860 -2.0498 35 1 5.7868 6.8682 -2.4910 36 1 6.4382 6.4968 -0.8765 37 1 6.3744 8.8959 -0.3531 38 1 4.8351 9.7897 -0.3560 39 1 5.9972 11.4501 -1.7256 40 1 6.6880 10.9590 -3.2906 41 1 7.4571 10.4329 -1.7738 42 1 3.8765 10.5362 -2.3752 43 1 4.5676 10.0444 -3.9404 44 1 3.7629 8.8407 -2.9055 45 1 5.1999 7.2253 1.1677 46 1 3.6662 8.1151 1.0093 47 1 3.2606 5.7434 1.6087 48 1 2.6095 6.1141 -0.0059 49 1 6.0341 -0.0315 0.8816 50 1 5.1283 -2.4898 -0.7179 51 1 5.3463 -3.5954 1.3884 52 1 2.0339 -3.9650 0.5453 53 1 2.6017 -3.6838 -1.8036 54 1 1.6511 -2.1337 0.0101 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17509628_13422088.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:18:18 Heat of formation + Delta-G solvation = 10.358785 kcal Electronic energy + Delta-G solvation = -32019.591136 eV Core-core repulsion = 27847.933578 eV Total energy + Delta-G solvation = -4171.657558 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.216 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -42.24388 -41.85752 -40.46269 -38.88416 -38.18320 -37.62863 -35.57888 -33.48124 -33.20974 -31.90263 -31.54352 -29.39989 -27.87224 -27.66283 -26.86678 -25.71533 -24.93628 -23.77559 -22.53323 -21.96480 -21.54656 -20.88407 -19.67697 -19.27295 -18.59084 -18.36792 -17.99998 -17.54554 -17.28577 -16.99534 -16.79555 -16.24380 -16.12970 -15.62033 -15.41697 -15.31572 -15.21593 -14.97814 -14.85061 -14.61535 -14.38107 -14.00804 -13.89748 -13.80742 -13.63118 -13.56653 -13.28095 -13.22787 -13.21706 -13.18154 -13.11473 -13.05285 -12.74061 -12.59182 -12.19864 -12.18251 -12.11127 -11.91692 -11.80369 -11.52471 -11.33124 -10.98190 -10.43379 -10.36744 -10.12164 -9.68435 -5.03073 -0.54399 -0.11366 1.01737 1.18182 1.51493 1.57845 1.82129 1.95081 2.37530 2.87349 2.98246 3.02718 3.19383 3.21291 3.38950 3.49765 3.51335 3.54084 3.70093 3.74557 3.81677 3.92057 3.98787 4.07237 4.09738 4.17331 4.18122 4.24238 4.26128 4.31893 4.37071 4.37805 4.42467 4.43506 4.49038 4.56573 4.61674 4.63261 4.67232 4.73896 4.77324 4.79690 4.85377 4.87489 4.94862 4.99967 5.02339 5.02909 5.12048 5.16385 5.20525 5.24979 5.30843 5.44441 5.47980 6.34333 6.55743 6.76710 7.04938 Molecular weight = 350.22amu Principal moments of inertia in cm(-1) A = 0.021188 B = 0.002184 C = 0.002086 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1321.189253 B =12819.099072 C =13421.075730 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.098 4.098 3 C -0.057 4.057 4 C -0.178 4.178 5 C 0.561 3.439 6 O -0.558 6.558 7 N -0.714 5.714 8 C 0.139 3.861 9 H 0.062 0.938 10 C -0.130 4.130 11 C -0.123 4.123 12 C -0.106 4.106 13 H 0.116 0.884 14 C 0.002 3.998 15 N -0.376 5.376 16 H 0.431 0.569 17 C -0.047 4.047 18 C -0.056 4.056 19 C -0.108 4.108 20 C -0.125 4.125 21 C 0.166 3.834 22 O -0.486 6.486 23 C -0.126 4.126 24 C -0.076 4.076 25 O -0.562 6.562 26 Si 0.772 3.228 27 C -0.100 4.100 28 H 0.084 0.916 29 H 0.096 0.904 30 H 0.066 0.934 31 H 0.171 0.829 32 H 0.412 0.588 33 H 0.034 0.966 34 H 0.081 0.919 35 H 0.093 0.907 36 H 0.071 0.929 37 H 0.137 0.863 38 H 0.147 0.853 39 H 0.123 0.877 40 H 0.125 0.875 41 H 0.122 0.878 42 H 0.126 0.874 43 H 0.126 0.874 44 H 0.122 0.878 45 H 0.068 0.932 46 H 0.095 0.905 47 H 0.063 0.937 48 H 0.089 0.911 49 H 0.404 0.596 50 H 0.080 0.920 51 H 0.404 0.596 52 H -0.282 1.282 53 H -0.289 1.289 54 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.222 32.728 -7.830 33.725 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.098 4.098 3 C -0.076 4.076 4 C -0.182 4.182 5 C 0.349 3.651 6 O -0.437 6.437 7 N -0.366 5.366 8 C 0.035 3.965 9 H 0.080 0.920 10 C -0.169 4.169 11 C -0.161 4.161 12 C -0.124 4.124 13 H 0.134 0.866 14 C -0.120 4.120 15 N 0.047 4.953 16 H 0.268 0.732 17 C -0.189 4.189 18 C -0.198 4.198 19 C -0.146 4.146 20 C -0.163 4.163 21 C 0.119 3.881 22 O -0.298 6.298 23 C -0.126 4.126 24 C -0.186 4.186 25 O -0.372 6.372 26 Si 0.677 3.323 27 C -0.117 4.117 28 H 0.103 0.897 29 H 0.114 0.886 30 H 0.085 0.915 31 H 0.188 0.812 32 H 0.249 0.751 33 H 0.053 0.947 34 H 0.099 0.901 35 H 0.112 0.888 36 H 0.089 0.911 37 H 0.155 0.845 38 H 0.165 0.835 39 H 0.142 0.858 40 H 0.144 0.856 41 H 0.141 0.859 42 H 0.145 0.855 43 H 0.145 0.855 44 H 0.140 0.860 45 H 0.087 0.913 46 H 0.114 0.886 47 H 0.081 0.919 48 H 0.107 0.893 49 H 0.264 0.736 50 H 0.098 0.902 51 H 0.255 0.745 52 H -0.209 1.209 53 H -0.216 1.216 54 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges 1.840 33.318 -8.396 34.409 hybrid contribution 0.177 -0.689 0.480 0.859 sum 2.017 32.629 -7.916 33.636 Atomic orbital electron populations 1.20922 0.88124 1.04497 1.03855 1.20125 0.98166 0.91869 0.99668 1.21426 0.91185 0.99381 0.95575 1.20535 0.94947 0.93166 1.09564 1.18051 0.86800 0.84208 0.76087 1.90803 1.14644 1.87836 1.50385 1.45935 1.10953 1.04957 1.74754 1.21208 0.95606 0.82141 0.97502 0.92023 1.21863 1.01216 0.98190 0.95596 1.21756 0.98752 0.93193 1.02375 1.21677 1.00079 0.92181 0.98494 0.86636 1.23948 1.07276 0.99628 0.81183 1.44927 1.16706 1.17965 1.15694 0.73162 1.24143 0.98073 0.86931 1.09711 1.24237 0.84470 1.08281 1.02817 1.21447 1.01159 0.96199 0.95827 1.21819 0.99017 0.93975 1.01493 1.18446 0.83905 0.90568 0.95199 1.84630 1.14759 1.96013 1.34446 1.19969 0.93855 0.94653 1.04157 1.24737 1.04422 1.00147 0.89255 1.86386 1.75010 1.47260 1.28540 0.93973 0.77962 0.84271 0.76135 1.21244 0.92983 0.99185 0.98332 0.89749 0.88569 0.91488 0.81170 0.75074 0.94743 0.90054 0.88827 0.91057 0.84539 0.83468 0.85805 0.85618 0.85946 0.85520 0.85543 0.86010 0.91349 0.88647 0.91856 0.89250 0.73609 0.90194 0.74478 1.20916 1.21550 0.85532 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 2.20 10.00 71.24 0.71 2.92 16 2 C -0.10 1.34 5.87 -19.90 -0.12 1.22 16 3 C -0.06 0.95 9.18 22.52 0.21 1.16 16 4 C -0.18 1.93 5.89 -20.01 -0.12 1.81 16 5 C 0.56 -6.77 7.73 86.69 0.67 -6.10 16 6 O -0.56 2.42 14.82 16.93 0.25 2.67 16 7 N -0.71 16.13 5.03 -445.70 -2.24 13.88 16 8 C 0.14 -3.89 2.45 44.99 0.11 -3.78 16 9 H 0.06 -1.33 7.58 -2.39 -0.02 -1.35 16 10 C -0.13 4.20 5.49 30.60 0.17 4.37 16 11 C -0.12 5.47 4.96 30.59 0.15 5.62 16 12 C -0.11 5.46 2.07 -10.79 -0.02 5.43 16 13 H 0.12 -6.31 6.18 -2.39 -0.01 -6.33 16 14 C 0.00 -0.10 4.12 86.30 0.36 0.26 16 15 N -0.38 24.14 0.66 -948.81 -0.62 23.52 16 16 H 0.43 -28.38 6.62 -89.69 -0.59 -28.97 16 17 C -0.05 2.93 9.19 127.69 1.17 4.10 16 18 C -0.06 3.51 8.93 127.69 1.14 4.65 16 19 C -0.11 4.67 5.21 30.61 0.16 4.83 16 20 C -0.13 4.45 5.39 30.61 0.17 4.62 16 21 C 0.17 -1.00 6.69 22.84 0.15 -0.85 16 22 O -0.49 2.23 10.91 -68.77 -0.75 1.48 16 23 C -0.13 0.84 5.30 -19.80 -0.10 0.73 16 24 C -0.08 0.76 2.37 71.24 0.17 0.93 16 25 O -0.56 6.06 12.86 -148.98 -1.92 4.15 16 26 Si 0.77 -9.58 30.19 68.60 2.07 -7.51 16 27 C -0.10 0.86 8.30 22.30 0.19 1.04 16 28 H 0.08 -1.65 8.14 -2.39 -0.02 -1.66 16 29 H 0.10 -2.24 8.08 -2.39 -0.02 -2.26 16 30 H 0.07 -1.15 8.08 -2.38 -0.02 -1.17 16 31 H 0.17 -4.41 6.40 -2.91 -0.02 -4.42 16 32 H 0.41 -11.57 6.63 -92.71 -0.61 -12.19 16 33 H 0.03 -0.76 8.14 -2.38 -0.02 -0.78 16 34 H 0.08 -2.83 8.14 -2.39 -0.02 -2.85 16 35 H 0.09 -4.76 6.62 -2.39 -0.02 -4.78 16 36 H 0.07 -2.93 8.14 -2.39 -0.02 -2.95 16 37 H 0.14 -8.16 8.09 -2.38 -0.02 -8.18 16 38 H 0.15 -9.11 8.09 -2.39 -0.02 -9.13 16 39 H 0.12 -7.70 8.14 -2.39 -0.02 -7.72 16 40 H 0.13 -7.81 8.14 -2.39 -0.02 -7.83 16 41 H 0.12 -7.55 8.11 -2.38 -0.02 -7.57 16 42 H 0.13 -7.92 8.11 -2.39 -0.02 -7.94 16 43 H 0.13 -7.87 8.14 -2.39 -0.02 -7.89 16 44 H 0.12 -7.51 6.19 -2.39 -0.01 -7.53 16 45 H 0.07 -2.76 8.14 -2.39 -0.02 -2.78 16 46 H 0.10 -4.31 8.14 -2.39 -0.02 -4.33 16 47 H 0.06 -1.97 8.14 -2.39 -0.02 -1.99 16 48 H 0.09 -3.42 8.14 -2.39 -0.02 -3.44 16 49 H 0.40 -3.67 9.06 -74.05 -0.67 -4.34 16 50 H 0.08 -0.85 7.83 -2.39 -0.02 -0.87 16 51 H 0.40 -8.25 8.74 -74.06 -0.65 -8.89 16 52 H -0.28 2.01 6.74 99.48 0.67 2.68 16 53 H -0.29 1.97 7.11 99.48 0.71 2.67 16 54 H 0.13 -1.12 4.87 -2.91 -0.01 -1.13 16 Total: 1.00 -85.11 412.32 0.36 -84.75 By element: Atomic # 1 Polarization: -154.32 SS G_CDS: -1.59 Total: -155.91 kcal Atomic # 6 Polarization: 27.80 SS G_CDS: 5.16 Total: 32.96 kcal Atomic # 7 Polarization: 40.27 SS G_CDS: -2.86 Total: 37.40 kcal Atomic # 8 Polarization: 10.72 SS G_CDS: -2.41 Total: 8.30 kcal Atomic # 14 Polarization: -9.58 SS G_CDS: 2.07 Total: -7.51 kcal Total: -85.11 0.36 -84.75 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17509628_13422088.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 95.110 kcal (2) G-P(sol) polarization free energy of solvation -85.107 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 10.003 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.356 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -84.751 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.359 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds