Wall clock time and date at job start Tue Mar 9 2021 13:23:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46903 * 1 3 3 H 1.00898 * 109.47306 * 2 1 4 4 C 1.46900 * 109.47208 * 120.00256 * 2 1 3 5 5 C 1.46897 * 109.46755 * 240.00214 * 2 1 3 6 6 C 1.53009 * 109.47051 * 175.00056 * 5 2 1 7 7 H 1.08992 * 109.46998 * 55.00076 * 6 5 2 8 8 C 1.52998 * 109.47120 * 175.00342 * 6 5 2 9 9 C 1.52996 * 109.46955 * 180.02562 * 8 6 5 10 10 C 1.52999 * 109.47046 * 299.99731 * 9 8 6 11 11 H 1.09005 * 109.47352 * 180.02562 * 10 9 8 12 12 N 1.46506 * 109.47091 * 299.99884 * 10 9 8 13 13 C 1.34773 * 119.99969 * 204.72183 * 12 10 9 14 14 O 1.21514 * 120.00185 * 0.02562 * 13 12 10 15 15 C 1.48176 * 119.99865 * 179.97438 * 13 12 10 16 16 N 1.32715 * 119.72273 * 0.02562 * 15 13 12 17 17 C 1.31518 * 121.64148 * 179.97438 * 16 15 13 18 18 C 1.38558 * 120.90716 * 0.02562 * 17 16 15 19 19 C 1.50700 * 120.32607 * 180.02562 * 18 17 16 20 20 O 1.42896 * 109.47430 * 119.99705 * 19 18 17 21 21 Si 1.86298 * 109.46947 * 359.97438 * 19 18 17 22 22 C 1.38630 * 119.34818 * 359.97013 * 18 17 16 23 23 C 1.38587 * 118.49003 * 359.73879 * 22 18 17 24 24 C 1.52995 * 109.47197 * 59.99984 * 10 9 8 25 25 C 1.52996 * 109.47136 * 299.99961 * 24 10 9 26 26 H 1.09003 * 109.46999 * 179.97438 * 1 2 3 27 27 H 1.09002 * 109.46975 * 299.99480 * 1 2 3 28 28 H 1.09000 * 109.47061 * 59.99313 * 1 2 3 29 29 H 1.09002 * 109.47368 * 300.00023 * 4 2 1 30 30 H 1.09001 * 109.46717 * 60.00025 * 4 2 1 31 31 H 1.09000 * 109.47253 * 179.97438 * 4 2 1 32 32 H 1.08999 * 109.47427 * 55.00480 * 5 2 1 33 33 H 1.09000 * 109.47501 * 294.99993 * 5 2 1 34 34 H 1.09002 * 109.47400 * 59.99974 * 8 6 5 35 35 H 1.09001 * 109.47056 * 299.99427 * 8 6 5 36 36 H 1.09005 * 109.47196 * 179.97438 * 9 8 6 37 37 H 1.09002 * 109.47186 * 59.99723 * 9 8 6 38 38 H 0.97005 * 119.99811 * 25.00235 * 12 10 9 39 39 H 1.08004 * 119.54683 * 179.97438 * 17 16 15 40 40 H 1.08998 * 109.46648 * 239.99587 * 19 18 17 41 41 H 0.96701 * 113.99811 * 299.99814 * 20 19 18 42 42 H 1.48495 * 110.00158 * 58.68729 * 21 19 18 43 43 H 1.48507 * 109.99678 * 180.02562 * 21 19 18 44 44 H 1.08001 * 120.75576 * 180.02562 * 22 18 17 45 45 H 1.07996 * 120.47387 * 180.28218 * 23 22 18 46 46 H 1.09002 * 109.47097 * 60.00557 * 24 10 9 47 47 H 1.09007 * 109.47360 * 179.97438 * 24 10 9 48 48 H 1.08992 * 109.47179 * 299.99954 * 25 24 10 49 49 H 1.09008 * 109.46942 * 179.97438 * 25 24 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8054 0.9513 0.0000 4 6 1.9587 -0.6925 1.1994 5 6 1.9586 -0.6924 -1.1995 6 6 3.4835 -0.5845 -1.2640 7 1 3.9141 -0.9635 -0.3372 8 6 4.0037 -1.4094 -2.4428 9 6 5.5286 -1.3020 -2.5069 10 6 5.9293 0.1628 -2.6932 11 1 7.0156 0.2393 -2.7393 12 7 5.3510 0.6726 -3.9391 13 6 5.9270 1.7131 -4.5731 14 8 6.9263 2.2281 -4.1117 15 6 5.3425 2.2283 -5.8334 16 7 4.2513 1.6614 -6.3327 17 6 3.7007 2.0884 -7.4482 18 6 4.2445 3.1534 -8.1480 19 6 3.6025 3.6323 -9.4246 20 8 3.2105 4.9985 -9.2773 21 14 2.1021 2.5914 -9.7935 22 6 5.3843 3.7749 -7.6618 23 6 5.9394 3.3077 -6.4810 24 6 5.4090 0.9877 -1.5144 25 6 3.8841 0.8803 -1.4503 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3633 0.5138 0.8901 28 1 -0.3633 0.5139 -0.8899 29 1 1.5954 -0.1788 2.0895 30 1 1.5954 -1.7202 1.1993 31 1 3.0487 -0.6929 1.1992 32 1 1.5240 -0.2329 -2.0872 33 1 1.6702 -1.7427 -1.1559 34 1 3.5732 -1.0304 -3.3697 35 1 3.7187 -2.4531 -2.3099 36 1 5.8993 -1.8901 -3.3465 37 1 5.9588 -1.6813 -1.5800 38 1 4.5512 0.2639 -4.3054 39 1 2.8130 1.6016 -7.8243 40 1 4.3153 3.5452 -10.2446 41 1 2.5755 5.1507 -8.5640 42 1 1.1362 2.6759 -8.6687 43 1 1.4602 3.0533 -11.0505 44 1 5.8270 4.6073 -8.1887 45 1 6.8245 3.7711 -6.0709 46 1 5.8393 0.6085 -0.5875 47 1 5.6948 2.0313 -1.6469 48 1 3.4539 1.2596 -2.3772 49 1 3.5135 1.4677 -0.6102 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17509652_13287726.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:23:07 Heat of formation + Delta-G solvation = 94.124153 kcal Electronic energy + Delta-G solvation = -28050.768163 eV Core-core repulsion = 24291.536844 eV Total energy + Delta-G solvation = -3759.231319 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 321.197 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -44.56949 -42.84703 -41.84367 -40.23431 -38.81517 -36.56146 -34.82722 -33.91575 -33.50729 -33.28445 -31.92678 -30.06977 -28.61265 -27.73025 -25.89679 -25.40509 -24.99223 -24.22069 -23.17324 -21.84708 -21.55001 -20.46639 -19.97380 -19.68141 -19.51771 -18.64285 -18.16667 -17.82231 -17.57320 -17.25417 -17.16248 -17.07701 -16.88007 -16.47204 -16.27775 -16.26237 -16.06090 -15.87303 -15.75883 -15.67485 -15.39795 -15.17521 -15.15397 -14.94081 -14.83639 -14.67830 -14.46799 -14.26724 -13.76365 -13.45676 -13.34523 -13.01955 -12.88740 -12.74988 -12.25059 -11.92914 -11.54645 -11.52432 -11.27829 -11.06987 -5.81636 -1.46248 -1.43297 -0.79039 0.36558 0.48300 0.54668 0.69760 0.70357 0.71573 0.95792 1.17190 1.35340 1.43171 1.66131 1.73229 1.80452 1.81600 1.84859 1.99001 2.02714 2.17635 2.18516 2.25402 2.29755 2.42053 2.43516 2.49625 2.57966 2.61675 2.67280 2.76865 2.86505 2.88747 2.91705 3.00854 3.09535 3.21817 3.28564 3.34942 3.54900 3.60280 3.61594 3.71139 3.73178 3.77028 3.90417 4.04335 4.16534 4.35041 4.52340 5.30721 5.49912 5.67613 6.14495 Molecular weight = 321.20amu Principal moments of inertia in cm(-1) A = 0.013441 B = 0.003399 C = 0.002953 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2082.645341 B = 8234.580734 C = 9479.827273 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.048 4.048 2 N -0.389 5.389 3 H 0.425 0.575 4 C -0.053 4.053 5 C -0.009 4.009 6 C -0.116 4.116 7 H 0.098 0.902 8 C -0.114 4.114 9 C -0.128 4.128 10 C 0.141 3.859 11 H 0.099 0.901 12 N -0.710 5.710 13 C 0.575 3.425 14 O -0.521 6.521 15 C 0.073 3.927 16 N -0.457 5.457 17 C 0.102 3.898 18 C -0.142 4.142 19 C -0.078 4.078 20 O -0.523 6.523 21 Si 0.688 3.312 22 C -0.051 4.051 23 C -0.105 4.105 24 C -0.131 4.131 25 C -0.128 4.128 26 H 0.123 0.877 27 H 0.124 0.876 28 H 0.123 0.877 29 H 0.124 0.876 30 H 0.123 0.877 31 H 0.124 0.876 32 H 0.131 0.869 33 H 0.132 0.868 34 H 0.075 0.925 35 H 0.081 0.919 36 H 0.084 0.916 37 H 0.086 0.914 38 H 0.408 0.592 39 H 0.165 0.835 40 H 0.128 0.872 41 H 0.377 0.623 42 H -0.257 1.257 43 H -0.249 1.249 44 H 0.150 0.850 45 H 0.153 0.847 46 H 0.080 0.920 47 H 0.080 0.920 48 H 0.079 0.921 49 H 0.057 0.943 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.279 -10.356 19.797 25.990 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.190 4.190 2 N 0.035 4.965 3 H 0.261 0.739 4 C -0.195 4.195 5 C -0.130 4.130 6 C -0.135 4.135 7 H 0.116 0.884 8 C -0.152 4.152 9 C -0.166 4.166 10 C 0.036 3.964 11 H 0.117 0.883 12 N -0.364 5.364 13 C 0.360 3.640 14 O -0.395 6.395 15 C -0.065 4.065 16 N -0.169 5.169 17 C -0.058 4.058 18 C -0.144 4.144 19 C -0.188 4.188 20 O -0.329 6.329 21 Si 0.588 3.412 22 C -0.077 4.077 23 C -0.126 4.126 24 C -0.169 4.169 25 C -0.166 4.166 26 H 0.141 0.859 27 H 0.143 0.857 28 H 0.141 0.859 29 H 0.143 0.857 30 H 0.142 0.858 31 H 0.143 0.857 32 H 0.149 0.851 33 H 0.150 0.850 34 H 0.093 0.907 35 H 0.100 0.900 36 H 0.103 0.897 37 H 0.105 0.895 38 H 0.246 0.754 39 H 0.182 0.818 40 H 0.146 0.854 41 H 0.224 0.776 42 H -0.182 1.182 43 H -0.173 1.173 44 H 0.168 0.832 45 H 0.171 0.829 46 H 0.098 0.902 47 H 0.099 0.901 48 H 0.098 0.902 49 H 0.076 0.924 Dipole moment (debyes) X Y Z Total from point charges -13.455 -10.897 20.011 26.462 hybrid contribution -0.094 1.891 -0.073 1.895 sum -13.549 -9.006 19.938 25.734 Atomic orbital electron populations 1.24143 0.75569 1.09677 1.09564 1.45115 1.16281 1.19169 1.15977 0.73893 1.24197 1.06061 1.02496 0.86739 1.24178 0.99184 1.02412 0.87235 1.21846 0.90115 0.98642 1.02862 0.88384 1.21526 0.96835 1.00166 0.96679 1.21835 0.94823 0.95489 1.04480 1.21015 0.99993 0.92442 0.82914 0.88329 1.45915 1.31533 1.33879 1.25080 1.17891 0.83209 0.80117 0.82802 1.90859 1.24399 1.58141 1.66151 1.21085 0.93753 0.95450 0.96221 1.67460 1.08912 1.28234 1.12260 1.22608 0.98937 0.93730 0.90495 1.21650 0.96921 0.97268 0.98599 1.25074 1.08300 0.88822 0.96578 1.86683 1.64848 1.23397 1.57940 0.95099 0.76737 0.88074 0.81324 1.21639 0.93371 0.98419 0.94296 1.22258 1.00540 0.95216 0.94595 1.21897 0.93636 1.02469 0.98917 1.21780 0.98869 0.93502 1.02411 0.85870 0.85732 0.85873 0.85726 0.85807 0.85731 0.85090 0.84975 0.90660 0.90035 0.89716 0.89526 0.75417 0.81802 0.85420 0.77555 1.18204 1.17306 0.83212 0.82922 0.90177 0.90145 0.90187 0.92396 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 1.50 9.19 60.07 0.55 2.05 16 2 N -0.39 12.45 0.66 -251.25 -0.17 12.28 16 3 H 0.42 -13.92 6.62 -39.29 -0.26 -14.18 16 4 C -0.05 1.65 8.93 60.06 0.54 2.19 16 5 C -0.01 0.26 4.12 -3.82 -0.02 0.24 16 6 C -0.12 3.01 2.07 -90.61 -0.19 2.82 16 7 H 0.10 -2.63 6.18 -51.93 -0.32 -2.95 16 8 C -0.11 2.55 5.03 -26.73 -0.13 2.41 16 9 C -0.13 2.40 5.61 -26.73 -0.15 2.25 16 10 C 0.14 -2.25 2.78 -67.93 -0.19 -2.44 16 11 H 0.10 -1.26 7.58 -51.93 -0.39 -1.65 16 12 N -0.71 10.24 4.22 -54.64 -0.23 10.01 16 13 C 0.57 -5.76 7.77 -12.18 -0.09 -5.85 16 14 O -0.52 3.31 15.99 5.35 0.09 3.40 16 15 C 0.07 -0.71 6.75 -83.00 -0.56 -1.27 16 16 N -0.46 5.09 9.54 -9.80 -0.09 5.00 16 17 C 0.10 -1.17 9.84 -17.57 -0.17 -1.34 16 18 C -0.14 1.51 5.40 -104.36 -0.56 0.95 16 19 C -0.08 0.81 2.83 36.01 0.10 0.92 16 20 O -0.52 4.51 12.78 -35.23 -0.45 4.06 16 21 Si 0.69 -7.70 29.82 -169.99 -5.07 -12.77 16 22 C -0.05 0.51 9.76 -39.31 -0.38 0.12 16 23 C -0.11 0.98 9.63 -39.05 -0.38 0.60 16 24 C -0.13 2.36 5.60 -26.74 -0.15 2.21 16 25 C -0.13 2.96 4.80 -26.73 -0.13 2.83 16 26 H 0.12 -3.83 8.14 -51.93 -0.42 -4.25 16 27 H 0.12 -3.89 8.14 -51.93 -0.42 -4.31 16 28 H 0.12 -3.83 8.11 -51.93 -0.42 -4.25 16 29 H 0.12 -3.87 8.14 -51.93 -0.42 -4.29 16 30 H 0.12 -3.83 8.11 -51.93 -0.42 -4.25 16 31 H 0.12 -3.80 6.19 -51.93 -0.32 -4.12 16 32 H 0.13 -3.91 8.09 -51.93 -0.42 -4.33 16 33 H 0.13 -4.01 8.09 -51.93 -0.42 -4.43 16 34 H 0.07 -1.64 6.51 -51.93 -0.34 -1.98 16 35 H 0.08 -1.84 8.14 -51.93 -0.42 -2.26 16 36 H 0.08 -1.42 8.14 -51.93 -0.42 -1.85 16 37 H 0.09 -1.65 8.14 -51.93 -0.42 -2.08 16 38 H 0.41 -6.62 6.20 -40.82 -0.25 -6.87 16 39 H 0.17 -2.27 4.89 -52.48 -0.26 -2.53 16 40 H 0.13 -1.38 7.96 -51.93 -0.41 -1.80 16 41 H 0.38 -4.42 8.70 45.56 0.40 -4.03 16 42 H -0.26 2.62 7.11 56.52 0.40 3.02 16 43 H -0.25 1.70 7.11 56.52 0.40 2.10 16 44 H 0.15 -1.56 8.06 -52.49 -0.42 -1.99 16 45 H 0.15 -1.40 7.64 -52.49 -0.40 -1.80 16 46 H 0.08 -1.51 8.14 -51.93 -0.42 -1.93 16 47 H 0.08 -1.17 8.14 -51.93 -0.42 -1.59 16 48 H 0.08 -1.73 7.60 -51.93 -0.39 -2.13 16 49 H 0.06 -1.47 6.63 -51.92 -0.34 -1.82 16 LS Contribution 375.65 15.07 5.66 5.66 Total: 1.00 -36.03 375.65 -10.16 -46.19 By element: Atomic # 1 Polarization: -74.54 SS G_CDS: -7.99 Total: -82.53 kcal Atomic # 6 Polarization: 10.61 SS G_CDS: -1.92 Total: 8.69 kcal Atomic # 7 Polarization: 27.78 SS G_CDS: -0.49 Total: 27.29 kcal Atomic # 8 Polarization: 7.82 SS G_CDS: -0.36 Total: 7.46 kcal Atomic # 14 Polarization: -7.70 SS G_CDS: -5.07 Total: -12.77 kcal Total LS contribution 5.66 Total: 5.66 kcal Total: -36.03 -10.16 -46.19 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17509652_13287726.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 140.316 kcal (2) G-P(sol) polarization free energy of solvation -36.029 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 104.287 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.163 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -46.192 kcal (6) G-S(sol) free energy of system = (1) + (5) 94.124 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds