Wall clock time and date at job start Tue Mar 9 2021 13:27:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42890 * 1 3 3 C 1.35894 * 116.99966 * 2 1 4 4 C 1.38819 * 119.93567 * 179.97438 * 3 2 1 5 5 C 1.37922 * 120.06592 * 179.97438 * 4 3 2 6 6 C 1.39353 * 119.93542 * 359.97438 * 5 4 3 7 7 C 1.48403 * 120.06723 * 179.97438 * 6 5 4 8 8 N 1.31634 * 126.03503 * 317.73949 * 7 6 5 9 9 N 1.40075 * 108.10315 * 180.19136 * 8 7 6 10 10 C 1.46498 * 125.92382 * 179.82041 * 9 8 7 11 11 C 1.50705 * 109.47183 * 304.69127 * 10 9 8 12 12 O 1.21281 * 119.99996 * 0.02562 * 11 10 9 13 13 N 1.34775 * 119.99846 * 180.02562 * 11 10 9 14 14 C 1.46496 * 119.99964 * 180.02562 * 13 11 10 15 15 H 1.09004 * 112.85239 * 336.19447 * 14 13 11 16 16 C 1.53785 * 113.69354 * 107.46248 * 14 13 11 17 17 C 1.54048 * 87.07558 * 139.98893 * 16 14 13 18 18 H 1.09005 * 113.61332 * 89.07746 * 17 16 14 19 19 Br 1.96608 * 113.69542 * 220.05232 * 17 16 14 20 20 C 1.53777 * 86.99158 * 334.57255 * 17 16 14 21 21 C 1.35024 * 108.14189 * 359.55667 * 9 8 7 22 22 C 1.35083 * 107.98669 * 0.26254 * 21 9 8 23 23 C 1.50697 * 126.08396 * 179.97438 * 22 21 9 24 24 O 1.42899 * 109.47399 * 105.17071 * 23 22 21 25 25 Si 1.86302 * 109.47016 * 345.17509 * 23 22 21 26 26 C 1.39354 * 119.87097 * 0.24655 * 6 5 4 27 27 C 1.37927 * 119.93530 * 359.51978 * 26 6 5 28 28 H 1.09010 * 109.47041 * 60.00115 * 1 2 3 29 29 H 1.08995 * 109.47513 * 180.02562 * 1 2 3 30 30 H 1.09006 * 109.47459 * 300.00211 * 1 2 3 31 31 H 1.08005 * 119.96854 * 359.97403 * 4 3 2 32 32 H 1.08001 * 120.03149 * 179.97438 * 5 4 3 33 33 H 1.09001 * 109.46835 * 184.69198 * 10 9 8 34 34 H 1.09002 * 109.47458 * 64.69009 * 10 9 8 35 35 H 0.97001 * 120.00128 * 359.97438 * 13 11 10 36 36 H 1.09001 * 113.61462 * 254.53950 * 16 14 13 37 37 H 1.08998 * 113.60963 * 25.44416 * 16 14 13 38 38 H 1.09007 * 113.61187 * 270.84149 * 20 17 16 39 39 H 1.09000 * 113.62122 * 140.01886 * 20 17 16 40 40 H 1.08005 * 126.00762 * 180.29502 * 21 9 8 41 41 H 1.09000 * 109.47397 * 225.17340 * 23 22 21 42 42 H 0.96693 * 114.00605 * 180.02562 * 24 23 22 43 43 H 1.48504 * 109.99905 * 59.99528 * 25 23 22 44 44 H 1.48492 * 110.00562 * 181.31854 * 25 23 22 45 45 H 1.07996 * 120.03340 * 179.72576 * 26 6 5 46 46 H 1.07999 * 119.97182 * 180.22541 * 27 26 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0458 1.2108 0.0000 4 6 3.4322 1.2819 0.0005 5 6 4.0611 2.5094 0.0000 6 6 3.3035 3.6790 -0.0016 7 6 3.9772 5.0013 -0.0016 8 7 5.0298 5.3341 0.7153 9 7 5.3481 6.6676 0.4281 10 6 6.4511 7.4333 1.0139 11 6 6.3398 7.4052 2.5166 12 8 5.4291 6.8043 3.0461 13 7 7.2524 8.0479 3.2720 14 6 7.1445 8.0201 4.7328 15 1 6.1282 7.8314 5.0787 16 6 8.2013 7.1344 5.4137 17 6 8.3084 8.2285 6.4929 18 1 7.6098 8.0966 7.3192 19 35 10.1493 8.5677 7.0942 20 6 7.8175 9.2181 5.4232 21 6 4.4654 7.1229 -0.4866 22 6 3.6068 6.1202 -0.7729 23 6 2.4566 6.1868 -1.7442 24 8 2.7967 5.4736 -2.9349 25 14 2.1023 7.9665 -2.1661 26 6 1.9120 3.6045 0.0025 27 6 1.2885 2.3742 -0.0018 28 1 -0.3634 0.5139 -0.8901 29 1 -0.3634 -1.0276 0.0005 30 1 -0.3634 0.5139 0.8900 31 1 4.0189 0.3751 0.0014 32 1 5.1398 2.5641 0.0008 33 1 6.4027 8.4649 0.6652 34 1 7.4008 6.9918 0.7117 35 1 7.9810 8.5282 2.8486 36 1 7.8049 6.1902 5.7870 37 1 9.1110 7.0101 4.8262 38 1 8.6224 9.6635 4.8382 39 1 7.1114 9.9567 5.8026 40 1 4.4491 8.1144 -0.9146 41 1 1.5724 5.7377 -1.2918 42 1 2.1010 5.4749 -3.6065 43 1 3.3002 8.5901 -2.7838 44 1 0.9496 8.0477 -3.0986 45 1 1.3223 4.5092 0.0057 46 1 0.2101 2.3158 -0.0023 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17509654_12622750.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:27:18 Heat of formation + Delta-G solvation = 44.332645 kcal Electronic energy + Delta-G solvation = -31331.820321 eV Core-core repulsion = 26851.982241 eV Total energy + Delta-G solvation = -4479.838080 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.067 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -42.46808 -41.16134 -40.92504 -39.28320 -38.42639 -37.72223 -34.82816 -34.42319 -32.37431 -32.03403 -31.28889 -30.90115 -28.99802 -27.98729 -26.87912 -26.11761 -25.07322 -23.65976 -23.60418 -21.85561 -21.53496 -21.08802 -20.61565 -19.18061 -18.47819 -18.38648 -18.24815 -17.43357 -17.10128 -16.87328 -16.67079 -16.38336 -16.25009 -15.85823 -15.71452 -15.38890 -15.11311 -14.82098 -14.63842 -14.53979 -14.34607 -14.13584 -13.84349 -13.75917 -13.66948 -13.61580 -13.38715 -12.98638 -12.91121 -12.78070 -12.64405 -12.27645 -12.11650 -12.09388 -11.81397 -11.69157 -11.52493 -11.20095 -10.81375 -10.76971 -10.47197 -10.22756 -10.13712 -10.03641 -9.64969 -8.95650 -4.84269 0.09797 0.32164 0.69135 0.84213 1.28663 1.41387 1.47132 1.65124 1.67670 2.00873 2.14191 2.32997 2.76589 3.17761 3.24554 3.32707 3.58993 3.62710 3.65257 3.75885 3.79318 3.81763 3.88350 3.94713 4.13731 4.15279 4.23591 4.29490 4.38299 4.38871 4.40111 4.51282 4.53932 4.58034 4.59415 4.71459 4.75746 4.77174 4.87592 4.90366 5.01351 5.01640 5.05968 5.25132 5.42896 5.50584 5.53922 5.67917 5.91863 6.38636 6.45367 6.61356 6.72743 7.15478 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.336 6.336 3 C 0.122 3.878 4 C -0.164 4.164 5 C -0.065 4.065 6 C -0.060 4.060 7 C 0.117 3.883 8 N -0.293 5.293 9 N -0.360 5.360 10 C 0.108 3.892 11 C 0.500 3.500 12 O -0.560 6.560 13 N -0.701 5.701 14 C 0.128 3.872 15 H 0.104 0.896 16 C -0.141 4.141 17 C -0.068 4.068 18 H 0.134 0.866 19 Br -0.170 7.170 20 C -0.119 4.119 21 C 0.074 3.926 22 C -0.226 4.226 23 C -0.053 4.053 24 O -0.558 6.558 25 Si 0.768 3.232 26 C -0.057 4.057 27 C -0.204 4.204 28 H 0.068 0.932 29 H 0.116 0.884 30 H 0.066 0.934 31 H 0.138 0.862 32 H 0.125 0.875 33 H 0.179 0.821 34 H 0.139 0.861 35 H 0.422 0.578 36 H 0.074 0.926 37 H 0.102 0.898 38 H 0.113 0.887 39 H 0.100 0.900 40 H 0.214 0.786 41 H 0.078 0.922 42 H 0.388 0.612 43 H -0.276 1.276 44 H -0.287 1.287 45 H 0.146 0.854 46 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.938 7.454 -1.442 7.835 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.249 6.249 3 C 0.076 3.924 4 C -0.183 4.183 5 C -0.085 4.085 6 C -0.062 4.062 7 C -0.049 4.049 8 N -0.115 5.115 9 N -0.142 5.142 10 C -0.015 4.015 11 C 0.286 3.714 12 O -0.436 6.436 13 N -0.355 5.355 14 C 0.022 3.978 15 H 0.122 0.878 16 C -0.180 4.180 17 C -0.164 4.164 18 H 0.152 0.848 19 Br -0.090 7.090 20 C -0.157 4.157 21 C -0.071 4.071 22 C -0.237 4.237 23 C -0.161 4.161 24 O -0.367 6.367 25 Si 0.670 3.330 26 C -0.077 4.077 27 C -0.223 4.223 28 H 0.086 0.914 29 H 0.134 0.866 30 H 0.085 0.915 31 H 0.156 0.844 32 H 0.143 0.857 33 H 0.196 0.804 34 H 0.156 0.844 35 H 0.260 0.740 36 H 0.093 0.907 37 H 0.121 0.879 38 H 0.132 0.868 39 H 0.119 0.881 40 H 0.230 0.770 41 H 0.096 0.904 42 H 0.238 0.762 43 H -0.203 1.203 44 H -0.214 1.214 45 H 0.164 0.836 46 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -0.377 7.173 -0.216 7.187 hybrid contribution -0.781 -0.761 -1.489 1.845 sum -1.157 6.412 -1.704 6.735 Atomic orbital electron populations 1.23370 0.76296 1.05621 1.02472 1.86057 1.23617 1.26828 1.88431 1.19275 0.92433 0.84911 0.95746 1.20487 0.92070 0.98573 1.07124 1.21014 0.99889 0.90945 0.96615 1.17846 0.93245 0.89261 1.05850 1.20729 0.94285 0.94273 0.95567 1.77699 1.17220 0.93982 1.22567 1.48075 1.24849 1.08625 1.32611 1.21999 0.89760 0.99966 0.89795 1.21030 0.81844 0.78369 0.90195 1.90824 1.35047 1.43060 1.74715 1.45684 1.29814 1.53978 1.06002 1.22281 0.99442 0.96693 0.79426 0.87807 1.23780 1.00616 0.97741 0.95897 1.26065 0.89058 1.01354 0.99971 0.84840 1.97456 1.22942 1.96547 1.92007 1.23574 1.01132 0.96202 0.94824 1.22742 0.90176 1.01102 0.93121 1.19585 1.04286 0.93891 1.05977 1.24458 0.96376 1.09596 0.85680 1.86605 1.46524 1.75454 1.28112 0.94296 0.77405 0.74730 0.86530 1.21124 0.92640 0.98210 0.95678 1.21398 1.01351 0.91232 1.08284 0.91376 0.86559 0.91534 0.84401 0.85690 0.80368 0.84376 0.73954 0.90726 0.87947 0.86820 0.88135 0.76952 0.90381 0.76205 1.20268 1.21403 0.83605 0.82543 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.03 9.81 113.37 1.11 1.09 16 2 O -0.34 -2.37 10.49 -92.35 -0.97 -3.34 16 3 C 0.12 1.02 6.69 22.55 0.15 1.17 16 4 C -0.16 -1.59 9.97 22.33 0.22 -1.37 16 5 C -0.07 -0.73 9.77 22.46 0.22 -0.51 16 6 C -0.06 -0.66 5.74 -20.03 -0.12 -0.77 16 7 C 0.12 1.32 6.66 42.52 0.28 1.60 16 8 N -0.29 -3.62 11.69 -48.16 -0.56 -4.19 16 9 N -0.36 -1.28 3.39 -351.91 -1.19 -2.48 16 10 C 0.11 -0.70 6.98 85.64 0.60 -0.10 16 11 C 0.50 -0.28 7.86 87.66 0.69 0.41 16 12 O -0.56 -6.42 15.31 -3.03 -0.05 -6.47 16 13 N -0.70 5.15 5.36 -440.02 -2.36 2.79 16 14 C 0.13 -0.64 4.24 45.52 0.19 -0.45 16 15 H 0.10 -0.04 7.46 -2.38 -0.02 -0.06 16 16 C -0.14 0.55 7.53 31.21 0.23 0.78 16 17 C -0.07 0.34 4.89 31.21 0.15 0.49 16 18 H 0.13 -0.79 8.14 -2.38 -0.02 -0.81 16 19 Br -0.17 -0.01 33.82 -20.37 -0.69 -0.70 16 20 C -0.12 1.02 7.46 31.12 0.23 1.25 16 21 C 0.07 0.07 9.96 83.48 0.83 0.90 16 22 C -0.23 -1.29 5.39 -19.95 -0.11 -1.40 16 23 C -0.05 -0.07 2.50 71.24 0.18 0.11 16 24 O -0.56 -2.54 12.86 -148.98 -1.92 -4.46 16 25 Si 0.77 -2.75 30.77 68.60 2.11 -0.64 16 26 C -0.06 -0.37 8.88 22.46 0.20 -0.17 16 27 C -0.20 -1.01 9.02 22.33 0.20 -0.81 16 28 H 0.07 -0.26 7.65 -2.38 -0.02 -0.28 16 29 H 0.12 -0.58 8.14 -2.39 -0.02 -0.60 16 30 H 0.07 -0.23 7.66 -2.38 -0.02 -0.25 16 31 H 0.14 1.01 8.06 -2.91 -0.02 0.98 16 32 H 0.13 1.35 8.06 -2.91 -0.02 1.33 16 33 H 0.18 -3.02 8.07 -2.39 -0.02 -3.04 16 34 H 0.14 -1.43 8.14 -2.39 -0.02 -1.45 16 35 H 0.42 -6.19 8.73 -92.71 -0.81 -7.00 16 36 H 0.07 -0.07 8.14 -2.39 -0.02 -0.09 16 37 H 0.10 -0.44 8.12 -2.39 -0.02 -0.46 16 38 H 0.11 -1.21 8.10 -2.38 -0.02 -1.23 16 39 H 0.10 -0.98 8.14 -2.39 -0.02 -1.00 16 40 H 0.21 -1.64 6.36 -2.91 -0.02 -1.66 16 41 H 0.08 -0.08 5.55 -2.39 -0.01 -0.09 16 42 H 0.39 -1.37 8.74 -74.06 -0.65 -2.02 16 43 H -0.28 -0.04 7.04 99.48 0.70 0.66 16 44 H -0.29 -0.28 7.11 99.48 0.71 0.43 16 45 H 0.15 0.29 6.20 -2.91 -0.02 0.27 16 46 H 0.16 -0.17 6.28 -2.91 -0.02 -0.19 16 Total: 0.00 -33.08 406.94 -0.72 -33.80 By element: Atomic # 1 Polarization: -16.18 SS G_CDS: -0.37 Total: -16.55 kcal Atomic # 6 Polarization: -3.05 SS G_CDS: 5.28 Total: 2.22 kcal Atomic # 7 Polarization: 0.24 SS G_CDS: -4.11 Total: -3.87 kcal Atomic # 8 Polarization: -11.33 SS G_CDS: -2.93 Total: -14.26 kcal Atomic # 14 Polarization: -2.75 SS G_CDS: 2.11 Total: -0.64 kcal Atomic # 35 Polarization: -0.01 SS G_CDS: -0.69 Total: -0.70 kcal Total: -33.08 -0.72 -33.80 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17509654_12622750.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 78.129 kcal (2) G-P(sol) polarization free energy of solvation -33.075 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 45.054 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.721 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.796 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.333 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds