Wall clock time and date at job start Tue Mar 9 2021 13:27:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86302 * 109.47430 * 2 1 4 4 C 1.50700 * 109.47151 * 240.00237 * 2 1 3 5 5 C 1.34191 * 126.54139 * 104.95479 * 4 2 1 6 6 N 1.36866 * 109.96584 * 180.02562 * 5 4 2 7 7 C 1.37401 * 109.98590 * 0.02562 * 6 5 4 8 8 C 1.39323 * 133.25328 * 180.02562 * 7 6 5 9 9 C 1.36355 * 120.23792 * 179.97438 * 8 7 6 10 10 C 1.40164 * 120.66539 * 359.96016 * 9 8 7 11 11 C 1.47659 * 119.97079 * 180.02562 * 10 9 8 12 12 O 1.21583 * 120.00030 * 179.97438 * 11 10 9 13 13 N 1.34777 * 120.00027 * 0.02562 * 11 10 9 14 14 C 1.46498 * 119.99828 * 180.27877 * 13 11 10 15 15 H 1.09001 * 112.85160 * 25.05344 * 14 13 11 16 16 C 1.53784 * 113.61507 * 156.25317 * 14 13 11 17 17 C 1.53776 * 87.08293 * 139.97795 * 16 14 13 18 18 H 1.08999 * 113.61416 * 89.11646 * 17 16 14 19 19 Br 1.96596 * 113.61512 * 219.93602 * 17 16 14 20 20 C 1.53781 * 113.61116 * 253.85697 * 14 13 11 21 21 C 1.39190 * 120.05697 * 0.29300 * 10 9 8 22 22 C 1.39224 * 119.39113 * 359.48344 * 21 10 9 23 23 H 0.96703 * 113.99676 * 59.99662 * 1 2 3 24 24 H 1.08998 * 109.47345 * 120.00328 * 2 1 3 25 25 H 1.48501 * 109.99780 * 60.00418 * 3 2 1 26 26 H 1.48499 * 109.99969 * 181.31852 * 3 2 1 27 27 H 1.07992 * 125.01704 * 0.06156 * 5 4 2 28 28 H 0.97004 * 125.00982 * 180.02562 * 6 5 4 29 29 H 1.08001 * 119.88213 * 359.97438 * 8 7 6 30 30 H 1.07997 * 119.66696 * 179.97438 * 9 8 7 31 31 H 0.97001 * 119.99727 * 359.97438 * 13 11 10 32 32 H 1.09000 * 113.61297 * 254.52834 * 16 14 13 33 33 H 1.08998 * 113.61005 * 25.34102 * 16 14 13 34 34 H 1.08995 * 113.61680 * 334.57196 * 20 14 13 35 35 H 1.09006 * 113.61326 * 105.47146 * 20 14 13 36 36 H 1.08004 * 120.30420 * 179.72550 * 21 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.4600 -0.1385 -2.3233 6 7 2.8017 -1.1003 -3.2351 7 6 2.4944 -2.3454 -2.7419 8 6 2.6334 -3.6348 -3.2509 9 6 2.2300 -4.7103 -2.5161 10 6 1.6722 -4.5369 -1.2420 11 6 1.2410 -5.7124 -0.4593 12 8 0.7575 -5.5626 0.6462 13 7 1.3845 -6.9514 -0.9698 14 6 0.9511 -8.1173 -0.1957 15 1 0.1720 -7.8788 0.5283 16 6 0.6319 -9.3475 -1.0615 17 6 1.3137 -10.1928 0.0273 18 1 0.6344 -10.5226 0.8133 19 35 2.4211 -11.6519 -0.6866 20 6 2.1143 -8.9306 0.3963 21 6 1.5191 -3.2572 -0.7162 22 6 1.9345 -2.1577 -1.4625 23 1 -0.3933 0.4418 -0.7651 24 1 1.7924 -0.5139 0.8899 25 1 1.5617 2.4678 1.2086 26 1 3.5347 1.7702 -0.0321 27 1 2.5962 0.9237 -2.4625 28 1 3.2020 -0.9284 -4.1019 29 1 3.0622 -3.7832 -4.2310 30 1 2.3417 -5.7057 -2.9197 31 1 1.7706 -7.0709 -1.8516 32 1 -0.4353 -9.5449 -1.1631 33 1 1.1570 -9.3574 -2.0166 34 1 3.0465 -8.8270 -0.1589 35 1 2.2422 -8.7918 1.4699 36 1 1.0856 -3.1187 0.2633 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17509654_13287722.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:27:40 Heat of formation + Delta-G solvation = 23.394083 kcal Electronic energy + Delta-G solvation = -21936.416695 eV Core-core repulsion = 18434.617751 eV Total energy + Delta-G solvation = -3501.798944 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.026 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -42.51705 -41.13475 -39.38499 -37.88433 -37.37239 -34.59876 -33.28981 -31.27340 -30.74553 -30.37813 -27.00117 -26.50634 -26.01019 -23.93585 -23.51623 -21.55316 -21.09998 -20.63375 -19.33268 -18.43965 -17.79177 -17.46195 -17.05027 -16.55019 -16.23627 -15.90552 -15.74712 -15.55389 -15.18030 -14.84541 -14.78809 -14.13475 -14.07563 -13.95180 -13.75623 -13.75081 -13.62885 -12.93269 -12.63497 -12.30346 -12.20981 -12.14301 -11.89505 -11.73462 -10.93115 -10.81556 -10.78835 -10.76168 -10.33702 -10.09361 -9.35918 -8.85988 -5.09615 -0.08424 0.15393 0.64890 1.29295 1.44811 1.63830 1.93928 1.94615 1.98904 2.16868 2.91267 3.10734 3.15658 3.53013 3.55682 3.57648 3.67701 3.71053 3.77780 3.82265 4.04641 4.30736 4.33853 4.40455 4.43330 4.45944 4.48823 4.54966 4.64982 4.75982 4.78366 4.98086 4.99263 5.21810 5.33230 5.41913 5.50927 5.57257 5.94854 6.32919 6.48783 6.67885 7.26307 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.034 4.034 3 Si 0.687 3.313 4 C -0.192 4.192 5 C 0.062 3.938 6 N -0.585 5.585 7 C 0.119 3.881 8 C -0.134 4.134 9 C -0.066 4.066 10 C -0.170 4.170 11 C 0.567 3.433 12 O -0.536 6.536 13 N -0.718 5.718 14 C 0.128 3.872 15 H 0.123 0.877 16 C -0.135 4.135 17 C -0.071 4.071 18 H 0.128 0.872 19 Br -0.149 7.149 20 C -0.142 4.142 21 C 0.008 3.992 22 C -0.103 4.103 23 H 0.377 0.623 24 H 0.113 0.887 25 H -0.254 1.254 26 H -0.256 1.256 27 H 0.179 0.821 28 H 0.421 0.579 29 H 0.128 0.872 30 H 0.128 0.872 31 H 0.402 0.598 32 H 0.091 0.909 33 H 0.100 0.900 34 H 0.099 0.901 35 H 0.088 0.912 36 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.999 3.389 -6.886 7.740 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.146 4.146 3 Si 0.589 3.411 4 C -0.199 4.199 5 C -0.065 4.065 6 N -0.187 5.187 7 C 0.010 3.990 8 C -0.154 4.154 9 C -0.086 4.086 10 C -0.175 4.175 11 C 0.356 3.644 12 O -0.413 6.413 13 N -0.370 5.370 14 C 0.021 3.979 15 H 0.141 0.859 16 C -0.174 4.174 17 C -0.168 4.168 18 H 0.147 0.853 19 Br -0.068 7.068 20 C -0.181 4.181 21 C -0.011 4.011 22 C -0.108 4.108 23 H 0.224 0.776 24 H 0.130 0.870 25 H -0.178 1.178 26 H -0.181 1.181 27 H 0.196 0.804 28 H 0.259 0.741 29 H 0.146 0.854 30 H 0.146 0.854 31 H 0.238 0.762 32 H 0.109 0.891 33 H 0.118 0.882 34 H 0.117 0.883 35 H 0.106 0.894 36 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 1.650 3.343 -5.446 6.599 hybrid contribution 0.338 -0.437 -0.615 0.827 sum 1.988 2.906 -6.061 7.010 Atomic orbital electron populations 1.86539 1.17260 1.81718 1.48917 1.24412 0.84909 1.09021 0.96237 0.95332 0.80641 0.77158 0.88002 1.20768 1.09255 0.91958 0.97934 1.21687 1.01036 0.94300 0.89454 1.41742 1.54653 1.04144 1.18201 1.18438 0.99793 0.86530 0.94196 1.19668 1.05740 0.88851 1.01163 1.20578 0.96739 0.98357 0.92955 1.19518 1.08416 0.93198 0.96321 1.18228 0.77596 0.82888 0.85706 1.90802 1.44321 1.86038 1.20136 1.45803 1.64606 1.05353 1.21188 1.22405 0.97516 0.83209 0.94729 0.85917 1.23621 1.02595 0.93253 0.97948 1.25963 0.98526 0.91108 1.01203 0.85349 1.97446 1.70849 1.51337 1.87211 1.23788 0.98877 0.91971 1.03472 1.20702 0.92344 0.89211 0.98848 1.18931 1.04527 0.92990 0.94356 0.77646 0.87010 1.17837 1.18087 0.80427 0.74086 0.85403 0.85417 0.76232 0.89064 0.88152 0.88272 0.89384 0.84377 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.51 12.88 -35.23 -0.45 -0.97 16 2 C -0.03 -0.01 3.06 36.01 0.11 0.10 16 3 Si 0.69 -1.17 30.76 -169.99 -5.23 -6.40 16 4 C -0.19 -0.05 5.58 -102.68 -0.57 -0.63 16 5 C 0.06 -0.14 10.43 -16.73 -0.17 -0.32 16 6 N -0.59 1.37 6.05 -10.61 -0.06 1.30 16 7 C 0.12 0.03 7.27 -83.95 -0.61 -0.58 16 8 C -0.13 0.12 10.00 -39.86 -0.40 -0.28 16 9 C -0.07 0.05 9.46 -39.54 -0.37 -0.33 16 10 C -0.17 -0.34 5.87 -104.97 -0.62 -0.95 16 11 C 0.57 1.65 7.76 -12.41 -0.10 1.55 16 12 O -0.54 -3.61 15.95 5.29 0.08 -3.53 16 13 N -0.72 0.35 5.31 -54.02 -0.29 0.07 16 14 C 0.13 -0.11 4.21 -67.12 -0.28 -0.40 16 15 H 0.12 0.06 7.50 -51.93 -0.39 -0.33 16 16 C -0.14 0.34 7.46 -25.92 -0.19 0.14 16 17 C -0.07 0.11 4.87 -25.83 -0.13 -0.01 16 18 H 0.13 -0.31 8.14 -51.93 -0.42 -0.73 16 19 Br -0.15 -0.10 33.82 -68.01 -2.30 -2.40 16 20 C -0.14 0.16 7.53 -25.82 -0.19 -0.03 16 21 C 0.01 0.03 9.64 -38.86 -0.37 -0.35 16 22 C -0.10 -0.22 6.34 -105.15 -0.67 -0.88 16 23 H 0.38 -1.23 8.70 45.56 0.40 -0.83 16 24 H 0.11 0.15 7.96 -51.93 -0.41 -0.26 16 25 H -0.25 -0.50 7.11 56.52 0.40 -0.10 16 26 H -0.26 -0.17 7.11 56.52 0.40 0.23 16 27 H 0.18 -1.06 6.35 -52.49 -0.33 -1.40 16 28 H 0.42 -2.27 8.96 -40.82 -0.37 -2.63 16 29 H 0.13 -0.43 8.06 -52.49 -0.42 -0.85 16 30 H 0.13 -0.47 6.36 -52.49 -0.33 -0.81 16 31 H 0.40 -1.23 6.71 -40.82 -0.27 -1.51 16 32 H 0.09 -0.27 8.14 -51.93 -0.42 -0.69 16 33 H 0.10 -0.30 8.09 -51.93 -0.42 -0.72 16 34 H 0.10 -0.11 8.12 -51.93 -0.42 -0.53 16 35 H 0.09 -0.06 8.14 -51.93 -0.42 -0.48 16 36 H 0.14 0.60 7.64 -52.48 -0.40 0.20 16 LS Contribution 327.37 15.07 4.93 4.93 Total: 0.00 -9.67 327.37 -11.73 -21.40 By element: Atomic # 1 Polarization: -7.61 SS G_CDS: -3.84 Total: -11.45 kcal Atomic # 6 Polarization: 1.61 SS G_CDS: -4.57 Total: -2.96 kcal Atomic # 7 Polarization: 1.72 SS G_CDS: -0.35 Total: 1.37 kcal Atomic # 8 Polarization: -4.12 SS G_CDS: -0.37 Total: -4.49 kcal Atomic # 14 Polarization: -1.17 SS G_CDS: -5.23 Total: -6.40 kcal Atomic # 35 Polarization: -0.10 SS G_CDS: -2.30 Total: -2.40 kcal Total LS contribution 4.93 Total: 4.93 kcal Total: -9.67 -11.73 -21.40 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17509654_13287722.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.794 kcal (2) G-P(sol) polarization free energy of solvation -9.668 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.126 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.732 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.400 kcal (6) G-S(sol) free energy of system = (1) + (5) 23.394 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds