Wall clock time and date at job start Tue Mar 9 2021 13:28:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86302 * 109.47345 * 2 1 4 4 C 1.50696 * 109.46742 * 239.99693 * 2 1 3 5 5 C 1.34504 * 125.49023 * 150.02947 * 4 2 1 6 6 C 1.46750 * 106.36394 * 180.20559 * 5 4 2 7 7 C 1.47261 * 126.96554 * 179.75730 * 6 5 4 8 8 O 1.21628 * 119.99867 * 180.02562 * 7 6 5 9 9 N 1.34770 * 120.00331 * 0.02702 * 7 6 5 10 10 C 1.46508 * 120.00332 * 179.97438 * 9 7 6 11 11 H 1.09004 * 112.84422 * 23.79780 * 10 9 7 12 12 C 1.53775 * 113.61548 * 154.99637 * 10 9 7 13 13 C 1.53788 * 87.07954 * 139.98107 * 12 10 9 14 14 H 1.08997 * 113.61208 * 89.20145 * 13 12 10 15 15 Br 1.96600 * 113.61469 * 220.01741 * 13 12 10 16 16 C 1.53779 * 87.08176 * 334.56765 * 13 12 10 17 17 C 1.36336 * 106.06409 * 359.61709 * 6 5 4 18 18 C 1.50996 * 126.79409 * 180.15506 * 17 6 5 19 19 C 1.53398 * 108.24697 * 164.57052 * 18 17 6 20 20 C 1.53157 * 109.04145 * 48.48793 * 19 18 17 21 21 C 1.53130 * 109.53014 * 290.42645 * 20 19 18 22 22 N 1.35212 * 108.65982 * 0.39162 * 17 6 5 23 23 H 0.96706 * 113.99720 * 300.00546 * 1 2 3 24 24 H 1.08999 * 109.46772 * 119.99927 * 2 1 3 25 25 H 1.48500 * 109.99950 * 178.68068 * 3 2 1 26 26 H 1.48499 * 109.99744 * 299.99918 * 3 2 1 27 27 H 1.08002 * 126.81398 * 359.93709 * 5 4 2 28 28 H 0.97005 * 120.00194 * 359.97438 * 9 7 6 29 29 H 1.08997 * 113.61651 * 254.53137 * 12 10 9 30 30 H 1.09001 * 113.61445 * 25.35309 * 12 10 9 31 31 H 1.08997 * 113.61291 * 270.88579 * 16 13 12 32 32 H 1.08996 * 113.61317 * 139.97542 * 16 13 12 33 33 H 1.08998 * 109.70644 * 284.26168 * 18 17 6 34 34 H 1.08999 * 109.70738 * 44.88355 * 18 17 6 35 35 H 1.08998 * 109.53618 * 168.35741 * 19 18 17 36 36 H 1.08998 * 109.54383 * 288.52956 * 19 18 17 37 37 H 1.08999 * 109.45981 * 50.44017 * 20 19 18 38 38 H 1.08993 * 109.46116 * 170.40861 * 20 19 18 39 39 H 1.08999 * 109.55853 * 291.14572 * 21 20 19 40 40 H 1.09004 * 109.56942 * 170.80916 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 3.0860 -0.4467 -1.8678 6 6 3.1530 -1.3745 -3.0028 7 6 4.2280 -1.4721 -4.0045 8 8 4.1532 -2.2930 -4.8988 9 7 5.2949 -0.6519 -3.9302 10 6 6.3647 -0.7495 -4.9264 11 1 6.0291 -1.1881 -5.8662 12 6 7.1613 0.5538 -5.1044 13 6 8.4212 -0.3224 -5.2045 14 1 8.6499 -0.6437 -6.2206 15 35 9.9800 0.4304 -4.2726 16 6 7.6596 -1.3741 -4.3805 17 6 2.0197 -2.1297 -2.9402 18 6 1.6163 -3.2355 -3.8860 19 6 0.4951 -4.0475 -3.2253 20 6 -0.5701 -3.0856 -2.6905 21 6 -0.0061 -2.3094 -1.4971 22 7 1.2884 -1.7252 -1.8772 23 1 -0.3933 0.4418 0.7651 24 1 1.7923 -0.5138 0.8900 25 1 3.5347 1.7702 0.0321 26 1 1.5616 2.4678 -1.2085 27 1 3.8165 0.3023 -1.6000 28 1 5.3544 0.0030 -3.2171 29 1 6.9260 1.0870 -6.0255 30 1 7.1451 1.1989 -4.2259 31 1 7.7808 -1.2566 -3.3037 32 1 7.8265 -2.3972 -4.7173 33 1 1.2573 -2.8063 -4.8214 34 1 2.4718 -3.8819 -4.0819 35 1 0.0469 -4.7156 -3.9607 36 1 0.9052 -4.6333 -2.4026 37 1 -0.8553 -2.3863 -3.4765 38 1 -1.4454 -3.6527 -2.3740 39 1 0.1325 -2.9864 -0.6541 40 1 -0.6978 -1.5143 -1.2189 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17509654_16915396.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:28:25 Heat of formation + Delta-G solvation = -0.025379 kcal Electronic energy + Delta-G solvation = -23901.378789 eV Core-core repulsion = 20343.941344 eV Total energy + Delta-G solvation = -3557.437445 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 355.057 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -42.75499 -40.81386 -38.95279 -38.00187 -36.92894 -34.37319 -33.47480 -31.29286 -31.03128 -29.49521 -26.95274 -26.76982 -25.49066 -24.58733 -23.31277 -21.70797 -21.24142 -20.79313 -19.42424 -18.61021 -18.10530 -17.42500 -16.89420 -16.61534 -16.32940 -16.00181 -15.67050 -15.52208 -15.23322 -15.12468 -14.66810 -14.51076 -14.20694 -13.90698 -13.84580 -13.77603 -13.70084 -13.28745 -12.97479 -12.83486 -12.51671 -12.13202 -12.11660 -12.02225 -11.85055 -11.75781 -11.69334 -10.83659 -10.75628 -10.72900 -10.63560 -9.99264 -9.57008 -9.00433 -5.09371 0.68129 0.82740 0.95275 1.36238 1.60075 1.82197 1.97911 2.45135 2.62319 3.00214 3.14871 3.21842 3.50401 3.53128 3.62338 3.71227 3.71963 3.77740 3.78614 4.09818 4.24025 4.27818 4.32982 4.39881 4.43957 4.48441 4.51136 4.60086 4.67364 4.69521 4.75083 4.81121 4.83908 4.88162 5.01359 5.05977 5.16469 5.20120 5.55574 5.71553 6.07526 6.21174 6.37955 6.65991 7.44379 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.552 6.552 2 C -0.048 4.048 3 Si 0.709 3.291 4 C 0.038 3.962 5 C -0.177 4.177 6 C -0.236 4.236 7 C 0.598 3.402 8 O -0.546 6.546 9 N -0.718 5.718 10 C 0.129 3.871 11 H 0.123 0.877 12 C -0.137 4.137 13 C -0.071 4.071 14 H 0.128 0.872 15 Br -0.150 7.150 16 C -0.141 4.141 17 C 0.123 3.877 18 C -0.055 4.055 19 C -0.129 4.129 20 C -0.139 4.139 21 C 0.102 3.898 22 N -0.421 5.421 23 H 0.387 0.613 24 H 0.078 0.922 25 H -0.254 1.254 26 H -0.252 1.252 27 H 0.145 0.855 28 H 0.401 0.599 29 H 0.090 0.910 30 H 0.099 0.901 31 H 0.098 0.902 32 H 0.087 0.913 33 H 0.089 0.911 34 H 0.100 0.900 35 H 0.080 0.920 36 H 0.068 0.932 37 H 0.074 0.926 38 H 0.089 0.911 39 H 0.080 0.920 40 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.301 1.537 4.905 6.702 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.157 4.157 3 Si 0.608 3.392 4 C -0.071 4.071 5 C -0.201 4.201 6 C -0.246 4.246 7 C 0.388 3.612 8 O -0.425 6.425 9 N -0.368 5.368 10 C 0.023 3.977 11 H 0.141 0.859 12 C -0.175 4.175 13 C -0.167 4.167 14 H 0.146 0.854 15 Br -0.070 7.070 16 C -0.181 4.181 17 C 0.005 3.995 18 C -0.093 4.093 19 C -0.167 4.167 20 C -0.177 4.177 21 C -0.018 4.018 22 N -0.097 5.097 23 H 0.236 0.764 24 H 0.096 0.904 25 H -0.178 1.178 26 H -0.177 1.177 27 H 0.162 0.838 28 H 0.236 0.764 29 H 0.108 0.892 30 H 0.117 0.883 31 H 0.117 0.883 32 H 0.105 0.895 33 H 0.107 0.893 34 H 0.119 0.881 35 H 0.099 0.901 36 H 0.087 0.913 37 H 0.093 0.907 38 H 0.107 0.893 39 H 0.098 0.902 40 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges -3.593 1.366 3.734 5.359 hybrid contribution -0.061 -0.325 0.087 0.341 sum -3.654 1.041 3.821 5.388 Atomic orbital electron populations 1.86369 1.17466 1.81838 1.50260 1.24454 0.85344 1.10440 0.95493 0.95479 0.80848 0.75307 0.87605 1.19647 0.94869 0.94323 0.98298 1.21613 0.98388 1.02875 0.97266 1.19753 0.98375 1.04998 1.01454 1.17311 0.80519 0.79899 0.83506 1.90763 1.79181 1.36813 1.35758 1.45675 1.20906 1.39154 1.31092 1.22364 0.85204 0.96338 0.93788 0.85923 1.23633 0.92401 0.96978 1.04533 1.25937 0.89754 0.99608 1.01418 0.85363 1.97440 1.44469 1.86118 1.78948 1.23756 0.94193 0.99067 1.01075 1.20424 0.91191 0.97698 0.90224 1.20528 0.99491 0.93491 0.95787 1.21734 0.95859 0.97914 1.01205 1.21938 0.99193 0.98907 0.97616 1.22301 0.82580 0.98981 0.97978 1.43881 1.17416 1.26793 1.21594 0.76415 0.90413 1.17842 1.17653 0.83787 0.76425 0.89178 0.88261 0.88331 0.89453 0.89275 0.88134 0.90128 0.91289 0.90697 0.89271 0.90196 0.86884 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.15 9.97 -35.23 -0.35 0.80 16 2 C -0.05 0.06 2.99 36.00 0.11 0.16 16 3 Si 0.71 -1.48 31.23 -169.99 -5.31 -6.78 16 4 C 0.04 0.08 6.18 -81.87 -0.51 -0.42 16 5 C -0.18 -0.46 9.09 -37.46 -0.34 -0.80 16 6 C -0.24 -0.95 6.28 -103.48 -0.65 -1.60 16 7 C 0.60 2.56 7.81 -12.60 -0.10 2.47 16 8 O -0.55 -3.74 14.95 5.25 0.08 -3.67 16 9 N -0.72 -0.93 5.35 -54.14 -0.29 -1.21 16 10 C 0.13 0.02 4.24 -67.12 -0.28 -0.26 16 11 H 0.12 0.15 7.46 -51.93 -0.39 -0.24 16 12 C -0.14 0.18 7.46 -25.92 -0.19 -0.01 16 13 C -0.07 0.06 4.88 -25.92 -0.13 -0.07 16 14 H 0.13 -0.23 8.14 -51.93 -0.42 -0.65 16 15 Br -0.15 -0.20 33.81 -68.01 -2.30 -2.50 16 16 C -0.14 0.05 7.51 -25.92 -0.19 -0.14 16 17 C 0.12 0.43 6.57 -81.64 -0.54 -0.10 16 18 C -0.06 -0.11 5.31 -27.53 -0.15 -0.26 16 19 C -0.13 0.05 5.98 -26.44 -0.16 -0.11 16 20 C -0.14 0.14 5.92 -26.58 -0.16 -0.02 16 21 C 0.10 0.00 6.21 -3.69 -0.02 -0.03 16 22 N -0.42 -1.02 3.11 -107.37 -0.33 -1.35 16 23 H 0.39 -2.69 8.74 45.56 0.40 -2.29 16 24 H 0.08 -0.21 7.96 -51.93 -0.41 -0.62 16 25 H -0.25 0.02 6.88 56.52 0.39 0.41 16 26 H -0.25 -0.49 7.11 56.52 0.40 -0.09 16 27 H 0.14 0.11 6.37 -52.49 -0.33 -0.22 16 28 H 0.40 -0.18 7.85 -40.82 -0.32 -0.50 16 29 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 30 H 0.10 -0.15 8.10 -51.93 -0.42 -0.58 16 31 H 0.10 -0.01 8.12 -51.93 -0.42 -0.43 16 32 H 0.09 -0.01 8.14 -51.93 -0.42 -0.43 16 33 H 0.09 0.19 8.14 -51.93 -0.42 -0.23 16 34 H 0.10 0.30 7.42 -51.93 -0.39 -0.08 16 35 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 36 H 0.07 -0.02 8.12 -51.93 -0.42 -0.44 16 37 H 0.07 -0.02 8.11 -51.93 -0.42 -0.44 16 38 H 0.09 -0.24 8.14 -51.93 -0.42 -0.66 16 39 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 40 H 0.11 -0.02 5.94 -51.93 -0.31 -0.33 16 LS Contribution 340.02 15.07 5.12 5.12 Total: 0.00 -7.93 340.02 -12.29 -20.22 By element: Atomic # 1 Polarization: -3.84 SS G_CDS: -5.61 Total: -9.45 kcal Atomic # 6 Polarization: 2.12 SS G_CDS: -3.31 Total: -1.19 kcal Atomic # 7 Polarization: -1.94 SS G_CDS: -0.62 Total: -2.57 kcal Atomic # 8 Polarization: -2.60 SS G_CDS: -0.27 Total: -2.87 kcal Atomic # 14 Polarization: -1.48 SS G_CDS: -5.31 Total: -6.78 kcal Atomic # 35 Polarization: -0.20 SS G_CDS: -2.30 Total: -2.50 kcal Total LS contribution 5.12 Total: 5.12 kcal Total: -7.93 -12.29 -20.22 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17509654_16915396.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 20.199 kcal (2) G-P(sol) polarization free energy of solvation -7.932 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.267 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.293 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.224 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.025 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds